PMC:3312845 / 648-916 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T336","span":{"begin":259,"end":267},"obj":"NN"},{"id":"T335","span":{"begin":253,"end":258},"obj":"NN"},{"id":"T334","span":{"begin":249,"end":252},"obj":"CC"},{"id":"T333","span":{"begin":243,"end":248},"obj":"NN"},{"id":"T332","span":{"begin":239,"end":242},"obj":"IN"},{"id":"T331","span":{"begin":231,"end":238},"obj":"NN"},{"id":"T330","span":{"begin":211,"end":230},"obj":"JJ"},{"id":"T329","span":{"begin":207,"end":210},"obj":"CC"},{"id":"T328","span":{"begin":198,"end":206},"obj":"NN"},{"id":"T327","span":{"begin":196,"end":197},"obj":"NN"},{"id":"T326","span":{"begin":184,"end":195},"obj":"JJ"},{"id":"T325","span":{"begin":174,"end":183},"obj":"VB"},{"id":"T324","span":{"begin":171,"end":173},"obj":"PRP"},{"id":"T323","span":{"begin":169,"end":170},"obj":"-COMMA-"},{"id":"T322","span":{"begin":159,"end":169},"obj":"RB"},{"id":"T321","span":{"begin":148,"end":157},"obj":"NN"},{"id":"T320","span":{"begin":145,"end":147},"obj":"NN"},{"id":"T319","span":{"begin":142,"end":144},"obj":"TO"},{"id":"T318","span":{"begin":136,"end":141},"obj":"JJ"},{"id":"T317","span":{"begin":134,"end":135},"obj":"-RRB-"},{"id":"T316","span":{"begin":126,"end":134},"obj":"NN"},{"id":"T315","span":{"begin":125,"end":126},"obj":"-LRB-"},{"id":"T314","span":{"begin":116,"end":124},"obj":"NN"},{"id":"T313","span":{"begin":112,"end":115},"obj":"NN"},{"id":"T312","span":{"begin":108,"end":111},"obj":"NN"},{"id":"T311","span":{"begin":100,"end":107},"obj":"JJ"},{"id":"T310","span":{"begin":96,"end":99},"obj":"CC"},{"id":"T309","span":{"begin":94,"end":95},"obj":"-COMMA-"},{"id":"T308","span":{"begin":87,"end":94},"obj":"NN"},{"id":"T307","span":{"begin":82,"end":86},"obj":"IN"},{"id":"T306","span":{"begin":74,"end":81},"obj":"VB"},{"id":"T305","span":{"begin":48,"end":73},"obj":"RB"},{"id":"T304","span":{"begin":43,"end":47},"obj":"VB"},{"id":"T303","span":{"begin":38,"end":42},"obj":"WDT"},{"id":"T302","span":{"begin":33,"end":37},"obj":"NN"},{"id":"T301","span":{"begin":30,"end":32},"obj":"IN"},{"id":"T300","span":{"begin":18,"end":29},"obj":"NN"},{"id":"T299","span":{"begin":15,"end":17},"obj":"IN"},{"id":"T298","span":{"begin":7,"end":14},"obj":"VB"},{"id":"T297","span":{"begin":3,"end":6},"obj":"VB"},{"id":"T296","span":{"begin":0,"end":2},"obj":"NN"}],"relations":[{"id":"R127","pred":"arg1Of","subj":"T296","obj":"T297"},{"id":"R128","pred":"arg2Of","subj":"T296","obj":"T298"},{"id":"R129","pred":"arg2Of","subj":"T298","obj":"T297"},{"id":"R130","pred":"arg1Of","subj":"T300","obj":"T301"},{"id":"R131","pred":"arg1Of","subj":"T300","obj":"T310"},{"id":"R132","pred":"arg2Of","subj":"T302","obj":"T301"},{"id":"R133","pred":"arg1Of","subj":"T302","obj":"T303"},{"id":"R134","pred":"arg1Of","subj":"T302","obj":"T304"},{"id":"R135","pred":"arg2Of","subj":"T302","obj":"T306"},{"id":"R136","pred":"arg2Of","subj":"T306","obj":"T304"},{"id":"R137","pred":"arg1Of","subj":"T306","obj":"T305"},{"id":"R138","pred":"arg1Of","subj":"T306","obj":"T307"},{"id":"R139","pred":"arg2Of","subj":"T308","obj":"T307"},{"id":"R140","pred":"arg1Of","subj":"T310","obj":"T298"},{"id":"R141","pred":"arg2Of","subj":"T310","obj":"T299"},{"id":"R142","pred":"arg1Of","subj":"T310","obj":"T309"},{"id":"R143","pred":"arg2Of","subj":"T314","obj":"T310"},{"id":"R144","pred":"arg1Of","subj":"T314","obj":"T311"},{"id":"R145","pred":"arg1Of","subj":"T314","obj":"T312"},{"id":"R146","pred":"arg1Of","subj":"T314","obj":"T313"},{"id":"R147","pred":"arg1Of","subj":"T314","obj":"T315"},{"id":"R148","pred":"arg1Of","subj":"T314","obj":"T318"},{"id":"R149","pred":"arg2Of","subj":"T316","obj":"T315"},{"id":"R150","pred":"arg3Of","subj":"T317","obj":"T315"},{"id":"R151","pred":"arg1Of","subj":"T318","obj":"T319"},{"id":"R152","pred":"arg2Of","subj":"T321","obj":"T319"},{"id":"R153","pred":"arg1Of","subj":"T321","obj":"T320"},{"id":"R154","pred":"arg1Of","subj":"T324","obj":"T325"},{"id":"R155","pred":"arg1Of","subj":"T325","obj":"T322"},{"id":"R156","pred":"arg1Of","subj":"T325","obj":"T323"},{"id":"R157","pred":"arg1Of","subj":"T328","obj":"T326"},{"id":"R158","pred":"arg1Of","subj":"T328","obj":"T327"},{"id":"R159","pred":"arg1Of","subj":"T328","obj":"T329"},{"id":"R160","pred":"arg2Of","subj":"T329","obj":"T325"},{"id":"R161","pred":"arg1Of","subj":"T329","obj":"T332"},{"id":"R162","pred":"arg2Of","subj":"T331","obj":"T329"},{"id":"R163","pred":"arg1Of","subj":"T331","obj":"T330"},{"id":"R164","pred":"arg1Of","subj":"T333","obj":"T334"},{"id":"R165","pred":"arg2Of","subj":"T335","obj":"T334"},{"id":"R166","pred":"arg2Of","subj":"T336","obj":"T332"},{"id":"R167","pred":"arg1Of","subj":"T336","obj":"T333"},{"id":"R168","pred":"arg1Of","subj":"T336","obj":"T335"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T148","span":{"begin":108,"end":124},"obj":"Protein"},{"id":"T149","span":{"begin":127,"end":134},"obj":"Protein"},{"id":"T150","span":{"begin":243,"end":248},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T478","span":{"begin":112,"end":115},"obj":"http://www.uniprot.org/uniprot/P01589"},{"id":"T467","span":{"begin":108,"end":111},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T468","span":{"begin":243,"end":246},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T474","span":{"begin":243,"end":248},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    sentences

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    simple1

    {"project":"simple1","denotations":[{"id":"T190","span":{"begin":243,"end":248},"obj":"Protein"},{"id":"T189","span":{"begin":127,"end":134},"obj":"Protein"},{"id":"T188","span":{"begin":108,"end":124},"obj":"Protein"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T912","span":{"begin":108,"end":124},"obj":"Protein"},{"id":"T913","span":{"begin":127,"end":134},"obj":"Protein"},{"id":"T914","span":{"begin":243,"end":248},"obj":"Protein"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T755","span":{"begin":243,"end":248},"obj":"Protein"},{"id":"T754","span":{"begin":127,"end":134},"obj":"Protein"},{"id":"T753","span":{"begin":108,"end":124},"obj":"Protein"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T795","span":{"begin":108,"end":124},"obj":"Protein"},{"id":"T796","span":{"begin":127,"end":134},"obj":"Protein"},{"id":"T797","span":{"begin":243,"end":248},"obj":"Protein"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T989","span":{"begin":0,"end":95},"obj":"Positive_regulation"},{"id":"T988","span":{"begin":0,"end":95},"obj":"Gene_expression"},{"id":"T979","span":{"begin":184,"end":195},"obj":"Entity"},{"id":"T977","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T971","span":{"begin":100,"end":135},"obj":"Protein"},{"id":"T966","span":{"begin":15,"end":29},"obj":"Entity"},{"id":"T965","span":{"begin":127,"end":130},"obj":"Protein"},{"id":"T933","span":{"begin":0,"end":2},"obj":"Protein"},{"id":"T942","span":{"begin":126,"end":134},"obj":"Entity"},{"id":"T944","span":{"begin":184,"end":195},"obj":"Entity"},{"id":"T950","span":{"begin":145,"end":147},"obj":"Entity"},{"id":"T954","span":{"begin":243,"end":248},"obj":"Protein"},{"id":"T957","span":{"begin":253,"end":258},"obj":"Protein"}],"relations":[{"id":"R601","pred":"causeOf","subj":"T966","obj":"T989"},{"id":"R653","pred":"themeOf","subj":"T933","obj":"T988"},{"id":"R654","pred":"themeOf","subj":"T933","obj":"T989"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    bionlp-st-ge-2016-spacy-parsed

    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Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T850","span":{"begin":253,"end":267},"obj":"Protein"},{"id":"T849","span":{"begin":243,"end":248},"obj":"Protein"},{"id":"T847","span":{"begin":108,"end":124},"obj":"Protein"},{"id":"T848","span":{"begin":126,"end":134},"obj":"Protein"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    testone

    {"project":"testone","denotations":[{"id":"T20","span":{"begin":108,"end":124},"obj":"Protein"},{"id":"T21","span":{"begin":127,"end":134},"obj":"Protein"},{"id":"T22","span":{"begin":243,"end":248},"obj":"Protein"},{"id":"T37","span":{"begin":7,"end":14},"obj":"Positive_regulation"},{"id":"T38","span":{"begin":148,"end":157},"obj":"Positive_regulation"},{"id":"T39","span":{"begin":198,"end":206},"obj":"Gene_expression"}],"relations":[{"id":"R3","pred":"themeOf","subj":"T20","obj":"T38"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}

    test3

    {"project":"test3","denotations":[{"id":"T74","span":{"begin":243,"end":248},"obj":"Protein"},{"id":"T73","span":{"begin":148,"end":157},"obj":"Positive_regulation"},{"id":"T72","span":{"begin":126,"end":134},"obj":"Protein"},{"id":"T71","span":{"begin":108,"end":124},"obj":"Protein"},{"id":"T52","span":{"begin":108,"end":124},"obj":"Protein"},{"id":"T53","span":{"begin":127,"end":134},"obj":"Protein"},{"id":"T54","span":{"begin":243,"end":248},"obj":"Protein"},{"id":"T70","span":{"begin":7,"end":14},"obj":"Positive_regulation"}],"relations":[{"id":"R19","pred":"causeOf","subj":"T71","obj":"T70"},{"id":"R20","pred":"themeOf","subj":"T71","obj":"T73"},{"id":"R21","pred":"equivalentTo","subj":"T72","obj":"T71"}],"text":"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction. Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits."}