PMC:3312845 / 33865-33913 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3312845","sourcedb":"PMC","sourceid":"3312845","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3312845","text":"TNF-α mediated p65-Thr 435 NF-κB phosphorylation","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T12803","span":{"begin":33,"end":48},"obj":"NN"},{"id":"T12802","span":{"begin":27,"end":32},"obj":"NN"},{"id":"T12801","span":{"begin":23,"end":26},"obj":"CD"},{"id":"T12800","span":{"begin":15,"end":22},"obj":"NN"},{"id":"T12799","span":{"begin":6,"end":14},"obj":"VB"},{"id":"T12798","span":{"begin":0,"end":5},"obj":"NN"}],"relations":[{"id":"R10056","pred":"arg1Of","subj":"T12803","obj":"T12798"},{"id":"R10057","pred":"arg2Of","subj":"T12803","obj":"T12799"},{"id":"R10058","pred":"arg1Of","subj":"T12803","obj":"T12800"},{"id":"R10059","pred":"arg1Of","subj":"T12803","obj":"T12801"},{"id":"R10060","pred":"arg1Of","subj":"T12803","obj":"T12802"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T12803","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12802","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12801","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12800","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12799","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12798","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T11712","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T11711","span":{"begin":0,"end":5},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T11712","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T11711","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T12884","span":{"begin":15,"end":18},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T12865","span":{"begin":15,"end":18},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T12846","span":{"begin":0,"end":5},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T12884","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T12865","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T12846","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T11726","span":{"begin":33,"end":48},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"attributes":[{"subj":"T11726","pred":"source","obj":"GO-BP"}]},{"project":"simple1","denotations":[{"id":"T11965","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T11964","span":{"begin":0,"end":5},"obj":"Protein"}],"attributes":[{"subj":"T11965","pred":"source","obj":"simple1"},{"subj":"T11964","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T14257","span":{"begin":33,"end":48},"obj":"Phosphorylation"},{"id":"T14234","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T14233","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R11188","pred":"themeOf","subj":"T14234","obj":"T14257"}],"attributes":[{"subj":"T14257","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T14234","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T14233","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T13860","span":{"begin":33,"end":48},"obj":"Phosphorylation"},{"id":"T13859","span":{"begin":6,"end":14},"obj":"Positive_regulation"},{"id":"T13837","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T13836","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R11028","pred":"themeOf","subj":"T13837","obj":"T13860"},{"id":"R11045","pred":"themeOf","subj":"T13860","obj":"T13859"}],"attributes":[{"subj":"T13860","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T13859","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T13837","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T13836","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T13934","span":{"begin":6,"end":14},"obj":"Positive_regulation"},{"id":"T13933","span":{"begin":33,"end":48},"obj":"Phosphorylation"},{"id":"T13912","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T13911","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R11025","pred":"causeOf","subj":"T13911","obj":"T13934"},{"id":"R11026","pred":"themeOf","subj":"T13912","obj":"T13933"},{"id":"R11041","pred":"themeOf","subj":"T13933","obj":"T13934"}],"attributes":[{"subj":"T13934","pred":"source","obj":"DLUT931"},{"subj":"T13933","pred":"source","obj":"DLUT931"},{"subj":"T13912","pred":"source","obj":"DLUT931"},{"subj":"T13911","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T14320","span":{"begin":0,"end":14},"obj":"Protein"},{"id":"T14305","span":{"begin":27,"end":32},"obj":"Protein"},{"id":"T14265","span":{"begin":0,"end":48},"obj":"Protein"},{"id":"T14259","span":{"begin":0,"end":48},"obj":"Entity"},{"id":"T14414","span":{"begin":0,"end":14},"obj":"Regulation"},{"id":"T14396","span":{"begin":0,"end":48},"obj":"Phosphorylation"}],"relations":[{"id":"R11186","pred":"partOf","subj":"T14259","obj":"T14305"},{"id":"R11187","pred":"siteOf","subj":"T14259","obj":"T14396"},{"id":"R11204","pred":"themeOf","subj":"T14305","obj":"T14396"},{"id":"R11208","pred":"causeOf","subj":"T14320","obj":"T14396"},{"id":"R11209","pred":"themeOf","subj":"T14320","obj":"T14414"}],"attributes":[{"subj":"T14320","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T14305","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T14265","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T14259","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T14414","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T14396","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T13767","span":{"begin":33,"end":48},"obj":"NN"},{"id":"T13766","span":{"begin":27,"end":32},"obj":"JJ"},{"id":"T13765","span":{"begin":23,"end":26},"obj":"CD"},{"id":"T13764","span":{"begin":15,"end":22},"obj":"JJ"},{"id":"T13763","span":{"begin":6,"end":14},"obj":"VBD"},{"id":"T13762","span":{"begin":0,"end":5},"obj":"NNP"}],"relations":[{"id":"R10932","pred":"amod","subj":"T13764","obj":"T13767"},{"id":"R10934","pred":"nummod","subj":"T13765","obj":"T13767"},{"id":"R10936","pred":"amod","subj":"T13766","obj":"T13767"},{"id":"R10971","pred":"nsubj","subj":"T13762","obj":"T13763"}],"attributes":[{"subj":"T13767","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T13766","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T13765","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T13764","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T13763","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T13762","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T14023","span":{"begin":6,"end":14},"obj":"Positive_regulation"},{"id":"T14022","span":{"begin":6,"end":14},"obj":"Positive_regulation"},{"id":"T14021","span":{"begin":33,"end":48},"obj":"Phosphorylation"},{"id":"T14020","span":{"begin":33,"end":48},"obj":"Phosphorylation"},{"id":"T14019","span":{"begin":30,"end":32},"obj":"Protein"},{"id":"T14018","span":{"begin":15,"end":29},"obj":"Protein"},{"id":"T14017","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R11107","pred":"themeOf","subj":"T14018","obj":"T14020"},{"id":"R11110","pred":"themeOf","subj":"T14019","obj":"T14021"},{"id":"R11111","pred":"themeOf","subj":"T14020","obj":"T14022"},{"id":"R11112","pred":"themeOf","subj":"T14021","obj":"T14023"},{"id":"R11113","pred":"Cause","subj":"T14022","obj":"T14017"},{"id":"R11114","pred":"Cause","subj":"T14023","obj":"T14017"}],"attributes":[{"subj":"T14023","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T14022","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T14021","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T14020","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T14019","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T14018","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T14017","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T11467","span":{"begin":33,"end":48},"obj":"Phosphorylation"},{"id":"T11466","span":{"begin":6,"end":14},"obj":"Positive_regulation"},{"id":"T11421","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T11420","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R9061","pred":"causeOf","subj":"T11420","obj":"T11466"},{"id":"R9062","pred":"themeOf","subj":"T11421","obj":"T11467"},{"id":"R9092","pred":"themeOf","subj":"T11467","obj":"T11466"}],"attributes":[{"subj":"T11467","pred":"source","obj":"testone"},{"subj":"T11466","pred":"source","obj":"testone"},{"subj":"T11421","pred":"source","obj":"testone"},{"subj":"T11420","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T11610","span":{"begin":33,"end":48},"obj":"Phosphorylation"},{"id":"T11609","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T11608","span":{"begin":6,"end":14},"obj":"Positive_regulation"},{"id":"T11607","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T11519","span":{"begin":15,"end":18},"obj":"Protein"},{"id":"T11518","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R9143","pred":"causeOf","subj":"T11607","obj":"T11608"},{"id":"R9144","pred":"themeOf","subj":"T11609","obj":"T11610"},{"id":"R9145","pred":"themeOf","subj":"T11610","obj":"T11608"}],"attributes":[{"subj":"T11610","pred":"source","obj":"test3"},{"subj":"T11609","pred":"source","obj":"test3"},{"subj":"T11608","pred":"source","obj":"test3"},{"subj":"T11607","pred":"source","obj":"test3"},{"subj":"T11519","pred":"source","obj":"test3"},{"subj":"T11518","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#a193ec","default":true},{"id":"bionlp-st-ge-2016-test-proteins","color":"#9eec93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec93b8"},{"id":"GO-BP","color":"#93d2ec"},{"id":"simple1","color":"#eceb93"},{"id":"BioNLP16_DUT","color":"#d193ec"},{"id":"BioNLP16_Messiy","color":"#93ecb7"},{"id":"DLUT931","color":"#ec9d93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#93a2ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#bcec93"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ec93d6"},{"id":"testone","color":"#93ece8"},{"id":"test3","color":"#ecce93"}]}]}}