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PMC:3312845 / 33865-33913 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12803 33-48 NN denotes phosphorylation
T12802 27-32 NN denotes NF-κB
T12801 23-26 CD denotes 435
T12800 15-22 NN denotes p65-Thr
T12799 6-14 VB denotes mediated
T12798 0-5 NN denotes TNF-α
R10056 T12803 T12798 arg1Of phosphorylation,TNF-α
R10057 T12803 T12799 arg2Of phosphorylation,mediated
R10058 T12803 T12800 arg1Of phosphorylation,p65-Thr
R10059 T12803 T12801 arg1Of phosphorylation,435
R10060 T12803 T12802 arg1Of phosphorylation,NF-κB

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11712 15-18 Protein denotes p65
T11711 0-5 Protein denotes TNF-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12884 15-18 http://www.uniprot.org/uniprot/P21579 denotes p65
T12865 15-18 http://www.uniprot.org/uniprot/Q04206 denotes p65
T12846 0-5 http://www.uniprot.org/uniprot/P01375 denotes TNF-α

GO-BP

Id Subject Object Predicate Lexical cue
T11726 33-48 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

simple1

Id Subject Object Predicate Lexical cue
T11965 15-18 Protein denotes p65
T11964 0-5 Protein denotes TNF-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14257 33-48 Phosphorylation denotes phosphorylation
T14234 15-18 Protein denotes p65
T14233 0-5 Protein denotes TNF-α
R11188 T14234 T14257 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13860 33-48 Phosphorylation denotes phosphorylation
T13859 6-14 Positive_regulation denotes mediated
T13837 15-18 Protein denotes p65
T13836 0-5 Protein denotes TNF-α
R11028 T13837 T13860 themeOf p65,phosphorylation
R11045 T13860 T13859 themeOf phosphorylation,mediated

DLUT931

Id Subject Object Predicate Lexical cue
T13934 6-14 Positive_regulation denotes mediated
T13933 33-48 Phosphorylation denotes phosphorylation
T13912 15-18 Protein denotes p65
T13911 0-5 Protein denotes TNF-α
R11025 T13911 T13934 causeOf TNF-α,mediated
R11026 T13912 T13933 themeOf p65,phosphorylation
R11041 T13933 T13934 themeOf phosphorylation,mediated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14320 0-14 Protein denotes TNF-α mediated
T14305 27-32 Protein denotes NF-κB
T14265 0-48 Protein denotes TNF-α mediated p65-Thr 435 NF-κB phosphorylation
T14259 0-48 Entity denotes TNF-α mediated p65-Thr 435 NF-κB phosphorylation
T14414 0-14 Regulation denotes TNF-α mediated
T14396 0-48 Phosphorylation denotes TNF-α mediated p65-Thr 435 NF-κB phosphorylation
R11186 T14259 T14305 partOf TNF-α mediated p65-Thr 435 NF-κB phosphorylation,NF-κB
R11187 T14259 T14396 siteOf TNF-α mediated p65-Thr 435 NF-κB phosphorylation,TNF-α mediated p65-Thr 435 NF-κB phosphorylation
R11204 T14305 T14396 themeOf NF-κB,TNF-α mediated p65-Thr 435 NF-κB phosphorylation
R11208 T14320 T14396 causeOf TNF-α mediated,TNF-α mediated p65-Thr 435 NF-κB phosphorylation
R11209 T14320 T14414 themeOf TNF-α mediated,TNF-α mediated

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13767 33-48 NN denotes phosphorylation
T13766 27-32 JJ denotes NF-κB
T13765 23-26 CD denotes 435
T13764 15-22 JJ denotes p65-Thr
T13763 6-14 VBD denotes mediated
T13762 0-5 NNP denotes TNF-α
R10932 T13764 T13767 amod p65-Thr,phosphorylation
R10934 T13765 T13767 nummod 435,phosphorylation
R10936 T13766 T13767 amod NF-κB,phosphorylation
R10971 T13762 T13763 nsubj TNF-α,mediated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T14023 6-14 Positive_regulation denotes mediated
T14022 6-14 Positive_regulation denotes mediated
T14021 33-48 Phosphorylation denotes phosphorylation
T14020 33-48 Phosphorylation denotes phosphorylation
T14019 30-32 Protein denotes κB
T14018 15-29 Protein denotes p65-Thr 435 NF
T14017 0-5 Protein denotes TNF-α
R11107 T14018 T14020 themeOf p65-Thr 435 NF,phosphorylation
R11110 T14019 T14021 themeOf κB,phosphorylation
R11111 T14020 T14022 themeOf phosphorylation,mediated
R11112 T14021 T14023 themeOf phosphorylation,mediated
R11113 T14022 T14017 Cause mediated,TNF-α
R11114 T14023 T14017 Cause mediated,TNF-α

testone

Id Subject Object Predicate Lexical cue
T11467 33-48 Phosphorylation denotes phosphorylation
T11466 6-14 Positive_regulation denotes mediated
T11421 15-18 Protein denotes p65
T11420 0-5 Protein denotes TNF-α
R9061 T11420 T11466 causeOf TNF-α,mediated
R9062 T11421 T11467 themeOf p65,phosphorylation
R9092 T11467 T11466 themeOf phosphorylation,mediated

test3

Id Subject Object Predicate Lexical cue
T11610 33-48 Phosphorylation denotes phosphorylation
T11609 15-18 Protein denotes p65
T11608 6-14 Positive_regulation denotes mediated
T11607 0-5 Protein denotes TNF-α
T11519 15-18 Protein denotes p65
T11518 0-5 Protein denotes TNF-α
R9143 T11607 T11608 causeOf TNF-α,mediated
R9144 T11609 T11610 themeOf p65,phosphorylation
R9145 T11610 T11608 themeOf phosphorylation,mediated