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PMC:3312845 / 235-1817 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T457 1577-1581 NN denotes loss
T456 1557-1576 JJ denotes neuronal-astroglial
T455 1553-1556 CC denotes and
T454 1540-1552 NN denotes infiltration
T453 1529-1539 NN denotes neutrophil
T452 1519-1528 JJ denotes extensive
T451 1516-1518 IN denotes in
T450 1508-1515 VB denotes results
T449 1502-1507 NN denotes edema
T448 1492-1501 JJ denotes vasogenic
T447 1490-1491 -COMMA- denotes ,
T446 1478-1490 RB denotes Subsequently
T445 1471-1476 NN denotes edema
T444 1461-1470 JJ denotes vasogenic
T443 1450-1460 JJ denotes SE-induced
T442 1447-1449 IN denotes in
T441 1438-1446 VB denotes involved
T440 1435-1437 VB denotes be
T439 1431-1434 MD denotes may
T438 1415-1430 NN denotes phosphorylation
T437 1409-1414 NN denotes NF-κB
T436 1405-1408 CD denotes 485
T435 1397-1404 NN denotes p65-Thr
T434 1382-1396 JJ denotes TNF-α-mediated
T433 1378-1381 IN denotes via
T432 1368-1377 NN denotes functions
T431 1363-1367 NN denotes cell
T430 1351-1362 JJ denotes endothelial
T429 1348-1350 IN denotes of
T428 1336-1347 NN denotes impairments
T427 1331-1335 IN denotes that
T426 1323-1330 VB denotes suggest
T425 1314-1322 NN denotes findings
T424 1308-1313 DT denotes These
T423 1297-1307 NN denotes Conclusion
T422 1292-1294 NN denotes PC
T421 1288-1291 DT denotes the
T420 1285-1287 IN denotes in
T419 1272-1284 NN denotes infiltration
T418 1261-1271 NN denotes neutrophil
T417 1250-1260 JJ denotes SE-induced
T416 1242-1249 VB denotes reduced
T415 1233-1241 NN denotes infusion
T414 1224-1232 NN denotes sTNFp55R
T413 1222-1223 -COMMA- denotes ,
T412 1211-1222 RB denotes Furthermore
T411 1204-1209 NN denotes cells
T410 1192-1203 JJ denotes endothelial
T409 1189-1191 IN denotes in
T408 1173-1188 NN denotes phosphorylation
T407 1162-1172 NN denotes p65-Thr435
T406 1159-1161 IN denotes of
T405 1148-1158 NN denotes inhibition
T404 1144-1147 IN denotes via
T403 1136-1143 NN denotes damages
T402 1127-1135 JJ denotes neuronal
T401 1123-1126 CC denotes and
T400 1117-1122 NN denotes edema
T399 1107-1116 JJ denotes vasogenic
T398 1096-1106 JJ denotes SE-induced
T397 1085-1095 VB denotes attenuated
T396 1076-1084 NN denotes infusion
T395 1074-1075 -RRB- denotes )
T394 1066-1074 NN denotes sTNFp55R
T393 1065-1066 -LRB- denotes (
T392 1056-1064 NN denotes receptor
T391 1052-1055 NN denotes p55
T390 1048-1051 NN denotes TNF
T389 1040-1047 JJ denotes soluble
T388 1037-1039 IN denotes by
T387 1031-1036 NN denotes TNF-α
T386 1028-1030 IN denotes of
T385 1013-1027 NN denotes Neutralization
T384 1010-1011 -RRB- denotes )
T383 1003-1010 NN denotes antigen
T382 995-1002 NN denotes barrier
T381 983-994 JJ denotes endothelial
T380 980-982 DT denotes an
T379 979-980 -LRB- denotes (
T378 968-978 NN denotes expression
T377 961-967 NN denotes SMI-71
T376 958-960 IN denotes by
T375 946-957 VB denotes accompanied
T374 940-945 NN denotes cells
T373 928-939 JJ denotes endothelial
T372 925-927 IN denotes in
T371 915-924 VB denotes increased
T370 911-914 VB denotes was
T369 895-910 NN denotes phosphorylation
T368 884-894 NN denotes p65-Thr435
T367 879-883 RB denotes only
T366 877-878 -COMMA- denotes ,
T365 869-877 NN denotes addition
T364 866-868 IN denotes In
T363 854-864 NN denotes astrocytes
T362 851-853 IN denotes as
T361 846-850 RB denotes well
T360 843-845 RB denotes as
T359 837-842 NN denotes cells
T358 825-836 JJ denotes endothelial
T357 822-824 IN denotes in
T356 813-821 VB denotes detected
T355 809-812 VB denotes was
T354 798-808 NN denotes expression
T353 789-797 NN denotes receptor
T352 785-788 NN denotes p75
T351 781-784 NN denotes TNF
T350 779-780 -COMMA- denotes ,
T349 771-779 NN denotes addition
T348 768-770 IN denotes In
T347 750-766 NN denotes immunoreactivity
T346 744-749 NN denotes TNF-α
T345 737-743 JJ denotes strong
T344 730-736 VB denotes showed
T343 720-729 NN denotes microglia
T342 710-719 VB denotes activated
T282 316-321 NN denotes edema
T341 705-709 RB denotes most
T340 703-704 -COMMA- denotes ,
T339 701-703 NN denotes SE
T338 691-700 VB denotes Following
T337 683-690 NN denotes Results
T336 672-680 NN denotes subunits
T335 666-671 NN denotes NF-κB
T334 662-665 CC denotes and
T333 656-661 NN denotes TNF-α
T332 652-655 IN denotes for
T331 644-651 NN denotes studies
T330 624-643 JJ denotes immunohistochemical
T329 620-623 CC denotes and
T328 611-619 NN denotes staining
T327 609-610 NN denotes B
T326 597-608 JJ denotes Fluoro-Jade
T325 587-596 VB denotes performed
T324 584-586 PRP denotes we
T323 582-583 -COMMA- denotes ,
T322 572-582 RB denotes Thereafter
T321 561-570 NN denotes induction
T320 558-560 NN denotes SE
T319 555-557 TO denotes to
T318 549-554 JJ denotes prior
T317 547-548 -RRB- denotes )
T316 539-547 NN denotes sTNFp55R
T315 538-539 -LRB- denotes (
T314 529-537 NN denotes receptor
T313 525-528 NN denotes p55
T312 521-524 NN denotes TNF
T311 513-520 JJ denotes soluble
T310 509-512 CC denotes and
T309 507-508 -COMMA- denotes ,
T308 500-507 NN denotes saline-
T307 495-499 IN denotes with
T306 487-494 VB denotes infused
T305 461-486 RB denotes intracerebroventricularly
T304 456-460 VB denotes were
T303 451-455 WDT denotes that
T302 446-450 NN denotes rats
T301 443-445 IN denotes in
T300 431-442 NN denotes pilocarpine
T299 428-430 IN denotes by
T298 420-427 VB denotes induced
T297 416-419 VB denotes was
T296 413-415 NN denotes SE
T295 405-412 NN denotes Methods
T294 400-402 NN denotes SE
T293 380-399 JJ denotes pilocarpine-induced
T292 377-379 IN denotes by
T291 368-376 VB denotes provoked
T290 361-367 NN denotes models
T289 352-360 NN denotes epilepsy
T288 348-351 NN denotes rat
T287 345-347 IN denotes in
T286 338-344 NN denotes events
T285 330-337 JJ denotes related
T284 326-329 PRP-DOLLAR- denotes its
T283 322-325 CC denotes and
T281 306-315 JJ denotes vasogenic
T280 299-305 IN denotes during
T279 288-298 NN denotes disruption
T278 286-287 -RRB- denotes )
T277 283-286 NN denotes BBB
T276 282-283 -LRB- denotes (
T275 274-281 NN denotes barrier
T274 262-273 NN denotes blood-brain
T273 259-261 IN denotes in
T272 256-258 NN denotes -α
T271 255-256 -RRB- denotes )
T270 252-255 NN denotes TNF
T269 251-252 -LRB- denotes (
T268 244-250 NN denotes factor
T267 235-243 NN denotes necrosis
T266 229-234 NN denotes tumor
T265 226-228 IN denotes of
T264 220-225 NN denotes roles
T263 216-219 DT denotes the
T262 203-215 VB denotes investigated
T261 200-202 PRP denotes we
T260 198-199 -COMMA- denotes ,
T259 193-198 NN denotes edema
T258 183-192 JJ denotes vasogenic
T257 172-182 JJ denotes SE-induced
T256 169-171 IN denotes of
T255 159-168 NN denotes mechanism
T254 155-158 DT denotes the
T253 145-154 VB denotes elucidate
T252 142-144 TO denotes To
T251 133-140 NN denotes damages
T250 122-132 JJ denotes astroglial
T249 118-121 CC denotes and
T248 109-117 JJ denotes neuronal
T247 106-108 IN denotes by
T246 94-105 VB denotes accompanied
T245 92-93 -RRB- denotes )
T244 90-92 NN denotes PC
T243 89-90 -LRB- denotes (
T242 82-88 NN denotes cortex
T241 73-81 NN denotes piriform
T240 69-72 DT denotes the
T239 66-68 IN denotes in
T238 60-65 NN denotes edema
T237 50-59 JJ denotes vasogenic
T236 43-49 JJ denotes severe
T235 35-42 VB denotes induces
T234 33-34 -RRB- denotes )
T233 31-33 NN denotes SE
T232 30-31 -LRB- denotes (
T231 18-29 NN denotes epilepticus
T230 11-17 NN denotes Status
T229 0-10 NN denotes Background
R62 T231 T230 arg1Of epilepticus,Status
R63 T231 T232 arg1Of epilepticus,(
R64 T231 T235 arg1Of epilepticus,induces
R65 T233 T232 arg2Of SE,(
R66 T234 T232 arg3Of ),(
R67 T235 T239 arg1Of induces,in
R68 T238 T235 arg2Of edema,induces
R69 T238 T236 arg1Of edema,severe
R70 T238 T237 arg1Of edema,vasogenic
R71 T242 T239 arg2Of cortex,in
R72 T242 T240 arg1Of cortex,the
R73 T242 T241 arg1Of cortex,piriform
R74 T242 T243 arg1Of cortex,(
R75 T242 T246 arg2Of cortex,accompanied
R76 T244 T243 arg2Of PC,(
R77 T245 T243 arg3Of ),(
R78 T248 T249 arg1Of neuronal,and
R79 T250 T249 arg2Of astroglial,and
R80 T251 T246 arg1Of damages,accompanied
R81 T251 T247 arg2Of damages,by
R82 T251 T248 arg1Of damages,neuronal
R83 T251 T250 arg1Of damages,astroglial
R84 T253 T252 arg1Of elucidate,To
R85 T255 T253 arg2Of mechanism,elucidate
R86 T255 T254 arg1Of mechanism,the
R87 T255 T256 arg1Of mechanism,of
R88 T259 T256 arg2Of edema,of
R89 T259 T257 arg1Of edema,SE-induced
R90 T259 T258 arg1Of edema,vasogenic
R91 T261 T253 arg1Of we,elucidate
R92 T261 T262 arg1Of we,investigated
R93 T262 T252 modOf investigated,To
R94 T262 T260 arg1Of investigated,","
R95 T262 T280 arg1Of investigated,during
R96 T262 T287 arg1Of investigated,in
R97 T264 T262 arg2Of roles,investigated
R98 T264 T263 arg1Of roles,the
R99 T264 T265 arg1Of roles,of
R100 T268 T266 arg1Of factor,tumor
R101 T268 T267 arg1Of factor,necrosis
R102 T268 T269 arg1Of factor,(
R103 T270 T269 arg2Of TNF,(
R104 T271 T269 arg3Of ),(
R105 T272 T265 arg2Of -α,of
R106 T272 T268 arg1Of -α,factor
R107 T272 T273 arg1Of -α,in
R108 T275 T274 arg1Of barrier,blood-brain
R109 T275 T276 arg1Of barrier,(
R110 T277 T276 arg2Of BBB,(
R111 T278 T276 arg3Of ),(
R112 T279 T273 arg2Of disruption,in
R113 T279 T275 arg1Of disruption,barrier
R114 T282 T281 arg1Of edema,vasogenic
R115 T282 T283 arg1Of edema,and
R116 T283 T280 arg2Of and,during
R117 T286 T283 arg2Of events,and
R118 T286 T284 arg1Of events,its
R119 T286 T285 arg1Of events,related
R120 T290 T287 arg2Of models,in
R121 T290 T288 arg1Of models,rat
R122 T290 T289 arg1Of models,epilepsy
R123 T290 T291 arg2Of models,provoked
R124 T294 T291 arg1Of SE,provoked
R125 T294 T292 arg2Of SE,by
R126 T294 T293 arg1Of SE,pilocarpine-induced
R127 T296 T297 arg1Of SE,was
R128 T296 T298 arg2Of SE,induced
R129 T298 T297 arg2Of induced,was
R130 T300 T301 arg1Of pilocarpine,in
R131 T300 T310 arg1Of pilocarpine,and
R132 T302 T301 arg2Of rats,in
R133 T302 T303 arg1Of rats,that
R134 T302 T304 arg1Of rats,were
R135 T302 T306 arg2Of rats,infused
R136 T306 T304 arg2Of infused,were
R137 T306 T305 arg1Of infused,intracerebroventricularly
R138 T306 T307 arg1Of infused,with
R139 T308 T307 arg2Of saline-,with
R140 T310 T298 arg1Of and,induced
R141 T310 T299 arg2Of and,by
R142 T310 T309 arg1Of and,","
R143 T314 T310 arg2Of receptor,and
R144 T314 T311 arg1Of receptor,soluble
R145 T314 T312 arg1Of receptor,TNF
R146 T314 T313 arg1Of receptor,p55
R147 T314 T315 arg1Of receptor,(
R148 T314 T318 arg1Of receptor,prior
R149 T316 T315 arg2Of sTNFp55R,(
R150 T317 T315 arg3Of ),(
R151 T318 T319 arg1Of prior,to
R152 T321 T319 arg2Of induction,to
R153 T321 T320 arg1Of induction,SE
R154 T324 T325 arg1Of we,performed
R155 T325 T322 arg1Of performed,Thereafter
R156 T325 T323 arg1Of performed,","
R157 T328 T326 arg1Of staining,Fluoro-Jade
R158 T328 T327 arg1Of staining,B
R159 T328 T329 arg1Of staining,and
R160 T329 T325 arg2Of and,performed
R161 T329 T332 arg1Of and,for
R162 T331 T329 arg2Of studies,and
R163 T331 T330 arg1Of studies,immunohistochemical
R164 T333 T334 arg1Of TNF-α,and
R165 T335 T334 arg2Of NF-κB,and
R166 T336 T332 arg2Of subunits,for
R167 T336 T333 arg1Of subunits,TNF-α
R168 T336 T335 arg1Of subunits,NF-κB
R169 T339 T338 arg2Of SE,Following
R170 T343 T341 arg1Of microglia,most
R171 T343 T342 arg2Of microglia,activated
R172 T343 T344 arg1Of microglia,showed
R173 T344 T338 arg1Of showed,Following
R174 T344 T340 arg1Of showed,","
R175 T347 T344 arg2Of immunoreactivity,showed
R176 T347 T345 arg1Of immunoreactivity,strong
R177 T347 T346 arg1Of immunoreactivity,TNF-α
R178 T349 T348 arg2Of addition,In
R179 T354 T351 arg1Of expression,TNF
R180 T354 T352 arg1Of expression,p75
R181 T354 T353 arg1Of expression,receptor
R182 T354 T355 arg1Of expression,was
R183 T354 T356 arg2Of expression,detected
R184 T356 T348 arg1Of detected,In
R185 T356 T350 arg1Of detected,","
R186 T356 T355 arg2Of detected,was
R187 T356 T357 arg1Of detected,in
R188 T359 T358 arg1Of cells,endothelial
R189 T359 T362 arg1Of cells,as
R190 T362 T357 arg2Of as,in
R191 T362 T360 arg1Of as,as
R192 T362 T361 arg1Of as,well
R193 T363 T362 arg2Of astrocytes,as
R194 T365 T364 arg2Of addition,In
R195 T369 T367 arg1Of phosphorylation,only
R196 T369 T368 arg1Of phosphorylation,p65-Thr435
R197 T369 T370 arg1Of phosphorylation,was
R198 T369 T371 arg2Of phosphorylation,increased
R199 T371 T364 arg1Of increased,In
R200 T371 T366 arg1Of increased,","
R201 T371 T370 arg2Of increased,was
R202 T371 T372 arg1Of increased,in
R203 T374 T372 arg2Of cells,in
R204 T374 T373 arg1Of cells,endothelial
R205 T374 T375 arg2Of cells,accompanied
R206 T378 T375 arg1Of expression,accompanied
R207 T378 T376 arg2Of expression,by
R208 T378 T377 arg1Of expression,SMI-71
R209 T378 T379 arg1Of expression,(
R210 T383 T379 arg2Of antigen,(
R211 T383 T380 arg1Of antigen,an
R212 T383 T381 arg1Of antigen,endothelial
R213 T383 T382 arg1Of antigen,barrier
R214 T384 T379 arg3Of ),(
R215 T385 T386 arg1Of Neutralization,of
R216 T385 T388 arg1Of Neutralization,by
R217 T385 T397 arg1Of Neutralization,attenuated
R218 T387 T386 arg2Of TNF-α,of
R219 T392 T389 arg1Of receptor,soluble
R220 T392 T390 arg1Of receptor,TNF
R221 T392 T391 arg1Of receptor,p55
R222 T392 T393 arg1Of receptor,(
R223 T394 T393 arg2Of sTNFp55R,(
R224 T395 T393 arg3Of ),(
R225 T396 T388 arg2Of infusion,by
R226 T396 T392 arg1Of infusion,receptor
R227 T397 T404 arg1Of attenuated,via
R228 T399 T400 arg1Of vasogenic,edema
R229 T399 T401 arg1Of vasogenic,and
R230 T402 T401 arg2Of neuronal,and
R231 T403 T397 arg2Of damages,attenuated
R232 T403 T398 arg1Of damages,SE-induced
R233 T403 T399 arg1Of damages,vasogenic
R234 T403 T402 arg1Of damages,neuronal
R235 T405 T404 arg2Of inhibition,via
R236 T405 T406 arg1Of inhibition,of
R237 T408 T406 arg2Of phosphorylation,of
R238 T408 T407 arg1Of phosphorylation,p65-Thr435
R239 T408 T409 arg1Of phosphorylation,in
R240 T411 T409 arg2Of cells,in
R241 T411 T410 arg1Of cells,endothelial
R242 T415 T414 arg1Of infusion,sTNFp55R
R243 T415 T416 arg1Of infusion,reduced
R244 T416 T412 arg1Of reduced,Furthermore
R245 T416 T413 arg1Of reduced,","
R246 T419 T416 arg2Of infiltration,reduced
R247 T419 T417 arg1Of infiltration,SE-induced
R248 T419 T418 arg1Of infiltration,neutrophil
R249 T419 T420 arg1Of infiltration,in
R250 T422 T420 arg2Of PC,in
R251 T422 T421 arg1Of PC,the
R252 T425 T424 arg1Of findings,These
R253 T425 T426 arg1Of findings,suggest
R254 T428 T429 arg1Of impairments,of
R255 T428 T433 arg1Of impairments,via
R256 T428 T439 arg1Of impairments,may
R257 T428 T440 arg1Of impairments,be
R258 T428 T441 arg2Of impairments,involved
R259 T432 T429 arg2Of functions,of
R260 T432 T430 arg1Of functions,endothelial
R261 T432 T431 arg1Of functions,cell
R262 T438 T433 arg2Of phosphorylation,via
R263 T438 T434 arg1Of phosphorylation,TNF-α-mediated
R264 T438 T435 arg1Of phosphorylation,p65-Thr
R265 T438 T436 arg1Of phosphorylation,485
R266 T438 T437 arg1Of phosphorylation,NF-κB
R267 T441 T426 arg2Of involved,suggest
R268 T441 T427 arg1Of involved,that
R269 T441 T439 arg2Of involved,may
R270 T441 T440 arg2Of involved,be
R271 T441 T442 arg1Of involved,in
R272 T445 T442 arg2Of edema,in
R273 T445 T443 arg1Of edema,SE-induced
R274 T445 T444 arg1Of edema,vasogenic
R275 T449 T448 arg1Of edema,vasogenic
R276 T449 T450 arg1Of edema,results
R277 T450 T446 arg1Of results,Subsequently
R278 T450 T447 arg1Of results,","
R279 T450 T451 arg1Of results,in
R280 T454 T452 arg1Of infiltration,extensive
R281 T454 T453 arg1Of infiltration,neutrophil
R282 T454 T455 arg1Of infiltration,and
R283 T455 T451 arg2Of and,in
R284 T457 T455 arg2Of loss,and
R285 T457 T456 arg1Of loss,neuronal-astroglial

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T147 229-258 Protein denotes tumor necrosis factor (TNF)-α
T148 521-537 Protein denotes TNF p55 receptor
T149 540-547 Protein denotes TNFp55R
T150 656-661 Protein denotes TNF-α
T151 744-749 Protein denotes TNF-α
T152 781-797 Protein denotes TNF p75 receptor
T153 884-887 Protein denotes p65
T154 1031-1036 Protein denotes TNF-α
T155 1048-1064 Protein denotes TNF p55 receptor
T156 1067-1074 Protein denotes TNFp55R
T157 1162-1165 Protein denotes p65
T158 1225-1232 Protein denotes TNFp55R
T159 1382-1387 Protein denotes TNF-α
T160 1397-1400 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T479 1052-1055 http://www.uniprot.org/uniprot/P01589 denotes p55
T478 525-528 http://www.uniprot.org/uniprot/P01589 denotes p55
T477 1382-1387 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T476 1031-1036 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T459 884-887 http://www.uniprot.org/uniprot/Q04206 denotes p65
T460 1162-1165 http://www.uniprot.org/uniprot/Q04206 denotes p65
T461 1397-1400 http://www.uniprot.org/uniprot/Q04206 denotes p65
T463 884-887 http://www.uniprot.org/uniprot/P21579 denotes p65
T464 1162-1165 http://www.uniprot.org/uniprot/P21579 denotes p65
T465 1397-1400 http://www.uniprot.org/uniprot/P21579 denotes p65
T466 252-255 http://www.uniprot.org/uniprot/P01375 denotes TNF
T467 521-524 http://www.uniprot.org/uniprot/P01375 denotes TNF
T468 656-659 http://www.uniprot.org/uniprot/P01375 denotes TNF
T469 744-747 http://www.uniprot.org/uniprot/P01375 denotes TNF
T470 781-784 http://www.uniprot.org/uniprot/P01375 denotes TNF
T471 1031-1034 http://www.uniprot.org/uniprot/P01375 denotes TNF
T472 1048-1051 http://www.uniprot.org/uniprot/P01375 denotes TNF
T473 252-258 http://www.uniprot.org/uniprot/P01375 denotes TNF)-α
T474 656-661 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T475 744-749 http://www.uniprot.org/uniprot/P01375 denotes TNF-α

UBERON-AE

Id Subject Object Predicate Lexical cue
T95 73-88 http://purl.obolibrary.org/obo/UBERON_0004725 denotes piriform cortex
T97 82-88 http://purl.obolibrary.org/obo/UBERON_0001851 denotes cortex
T98 262-267 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T99 262-281 http://purl.obolibrary.org/obo/UBERON_0000120 denotes blood-brain barrier
T100 268-273 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T101 1519-1528 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensive

GO-BP

Id Subject Object Predicate Lexical cue
T166 235-243 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T173 1409-1430 http://purl.obolibrary.org/obo/GO_0007252 denotes NF-κB phosphorylation
T172 1415-1430 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T171 1173-1188 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T170 895-910 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T168 235-243 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T162 235-243 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T164 235-243 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis

GO-CC

Id Subject Object Predicate Lexical cue
T181 837-842 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T182 940-945 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T183 1204-1209 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T184 1363-1367 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T117 1478-1582 Sentence denotes Subsequently, vasogenic edema results in extensive neutrophil infiltration and neuronal-astroglial loss.
T116 1308-1477 Sentence denotes These findings suggest that impairments of endothelial cell functions via TNF-α-mediated p65-Thr 485 NF-κB phosphorylation may be involved in SE-induced vasogenic edema.
T115 1297-1307 Sentence denotes Conclusion
T114 1211-1295 Sentence denotes Furthermore, sTNFp55R infusion reduced SE-induced neutrophil infiltration in the PC.
T113 1013-1210 Sentence denotes Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation in endothelial cells.
T112 866-1012 Sentence denotes In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 expression (an endothelial barrier antigen).
T111 768-865 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.
T110 691-767 Sentence denotes Following SE, most activated microglia showed strong TNF-α immunoreactivity.
T109 683-690 Sentence denotes Results
T108 572-681 Sentence denotes Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits.
T107 413-571 Sentence denotes SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction.
T106 405-412 Sentence denotes Methods
T105 142-403 Sentence denotes To elucidate the mechanism of SE-induced vasogenic edema, we investigated the roles of tumor necrosis factor (TNF)-α in blood-brain barrier (BBB) disruption during vasogenic edema and its related events in rat epilepsy models provoked by pilocarpine-induced SE.
T104 11-141 Sentence denotes Status epilepticus (SE) induces severe vasogenic edema in the piriform cortex (PC) accompanied by neuronal and astroglial damages.
T103 0-10 Sentence denotes Background
T3 0-10 Sentence denotes Background
T4 11-141 Sentence denotes Status epilepticus (SE) induces severe vasogenic edema in the piriform cortex (PC) accompanied by neuronal and astroglial damages.
T5 142-403 Sentence denotes To elucidate the mechanism of SE-induced vasogenic edema, we investigated the roles of tumor necrosis factor (TNF)-α in blood-brain barrier (BBB) disruption during vasogenic edema and its related events in rat epilepsy models provoked by pilocarpine-induced SE.
T6 405-412 Sentence denotes Methods
T7 413-571 Sentence denotes SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction.
T8 572-681 Sentence denotes Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits.
T9 683-690 Sentence denotes Results
T10 691-767 Sentence denotes Following SE, most activated microglia showed strong TNF-α immunoreactivity.
T11 768-865 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.
T12 866-1012 Sentence denotes In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 expression (an endothelial barrier antigen).
T13 1013-1210 Sentence denotes Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation in endothelial cells.
T14 1211-1295 Sentence denotes Furthermore, sTNFp55R infusion reduced SE-induced neutrophil infiltration in the PC.
T15 1297-1307 Sentence denotes Conclusion
T16 1308-1477 Sentence denotes These findings suggest that impairments of endothelial cell functions via TNF-α-mediated p65-Thr 485 NF-κB phosphorylation may be involved in SE-induced vasogenic edema.
T17 1478-1582 Sentence denotes Subsequently, vasogenic edema results in extensive neutrophil infiltration and neuronal-astroglial loss.

ICD10

Id Subject Object Predicate Lexical cue
T175 11-29 http://purl.bioontology.org/ontology/ICD10/G41.9 denotes Status epilepticus
T177 11-29 http://purl.bioontology.org/ontology/ICD10/G41 denotes Status epilepticus
T178 352-360 http://purl.bioontology.org/ontology/ICD10/G40.9 denotes epilepsy
T179 352-360 http://purl.bioontology.org/ontology/ICD10/G40 denotes epilepsy

simple1

Id Subject Object Predicate Lexical cue
T200 1397-1400 Protein denotes p65
T199 1382-1387 Protein denotes TNF-α
T198 1225-1232 Protein denotes TNFp55R
T197 1162-1165 Protein denotes p65
T196 1067-1074 Protein denotes TNFp55R
T195 1048-1064 Protein denotes TNF p55 receptor
T194 1031-1036 Protein denotes TNF-α
T193 884-887 Protein denotes p65
T192 781-797 Protein denotes TNF p75 receptor
T191 744-749 Protein denotes TNF-α
T190 656-661 Protein denotes TNF-α
T189 540-547 Protein denotes TNFp55R
T188 521-537 Protein denotes TNF p55 receptor
T187 229-258 Protein denotes tumor necrosis factor (TNF)-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T911 229-258 Protein denotes tumor necrosis factor (TNF)-α
T912 521-537 Protein denotes TNF p55 receptor
T913 540-547 Protein denotes TNFp55R
T914 656-661 Protein denotes TNF-α
T915 744-749 Protein denotes TNF-α
T916 781-797 Protein denotes TNF p75 receptor
T917 884-887 Protein denotes p65
T918 1031-1036 Protein denotes TNF-α
T919 1048-1064 Protein denotes TNF p55 receptor
T920 1067-1074 Protein denotes TNFp55R
T921 1162-1165 Protein denotes p65
T922 1225-1232 Protein denotes TNFp55R
T923 1382-1387 Protein denotes TNF-α
T924 1397-1400 Protein denotes p65
T926 798-808 Gene_expression denotes expression
T927 915-924 Positive_regulation denotes increased
T928 895-910 Phosphorylation denotes phosphorylation
T929 1173-1188 Phosphorylation denotes phosphorylation
T930 1148-1158 Negative_regulation denotes inhibition
T931 1013-1027 Negative_regulation denotes Neutralization
R647 T916 T926 themeOf TNF p75 receptor,expression
R648 T917 T928 themeOf p65,phosphorylation
R649 T918 T931 themeOf TNF-α,Neutralization
R650 T921 T929 themeOf p65,phosphorylation
R651 T928 T927 themeOf phosphorylation,increased
R652 T929 T930 themeOf phosphorylation,inhibition

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T768 798-808 Gene_expression denotes expression
T765 1397-1400 Protein denotes p65
T764 1382-1387 Protein denotes TNF-α
T763 1225-1232 Protein denotes TNFp55R
T762 1162-1165 Protein denotes p65
T761 1067-1074 Protein denotes TNFp55R
T760 1048-1064 Protein denotes TNF p55 receptor
T759 1031-1036 Protein denotes TNF-α
T758 884-887 Protein denotes p65
T757 781-797 Protein denotes TNF p75 receptor
T756 744-749 Protein denotes TNF-α
T755 656-661 Protein denotes TNF-α
T754 540-547 Protein denotes TNFp55R
T753 521-537 Protein denotes TNF p55 receptor
T775 1415-1430 Phosphorylation denotes phosphorylation
T774 1388-1396 Positive_regulation denotes mediated
T773 1148-1158 Negative_regulation denotes inhibition
T772 1173-1188 Phosphorylation denotes phosphorylation
T771 1013-1027 Negative_regulation denotes Neutralization
T770 915-924 Positive_regulation denotes increased
T769 895-910 Phosphorylation denotes phosphorylation
T752 229-258 Protein denotes tumor necrosis factor (TNF)-α
R556 T757 T768 themeOf TNF p75 receptor,expression
R557 T758 T769 themeOf p65,phosphorylation
R558 T759 T771 themeOf TNF-α,Neutralization
R559 T762 T772 themeOf p65,phosphorylation
R560 T764 T774 causeOf TNF-α,mediated
R561 T765 T774 themeOf p65,mediated
R562 T765 T775 themeOf p65,phosphorylation
R564 T769 T770 themeOf phosphorylation,increased
R565 T772 T773 themeOf phosphorylation,inhibition

DLUT931

Id Subject Object Predicate Lexical cue
T819 1388-1396 Positive_regulation denotes mediated
T818 1415-1430 Phosphorylation denotes phosphorylation
T817 1148-1158 Negative_regulation denotes inhibition
T816 1173-1188 Phosphorylation denotes phosphorylation
T794 229-258 Protein denotes tumor necrosis factor (TNF)-α
T795 521-537 Protein denotes TNF p55 receptor
T796 540-547 Protein denotes TNFp55R
T797 656-661 Protein denotes TNF-α
T798 744-749 Protein denotes TNF-α
T799 781-797 Protein denotes TNF p75 receptor
T800 884-887 Protein denotes p65
T801 1031-1036 Protein denotes TNF-α
T802 1048-1064 Protein denotes TNF p55 receptor
T803 1067-1074 Protein denotes TNFp55R
T804 1162-1165 Protein denotes p65
T805 1225-1232 Protein denotes TNFp55R
T806 1382-1387 Protein denotes TNF-α
T807 1397-1400 Protein denotes p65
T811 798-808 Gene_expression denotes expression
T812 895-910 Phosphorylation denotes phosphorylation
T813 915-924 Positive_regulation denotes increased
T814 1013-1027 Negative_regulation denotes Neutralization
T815 1076-1084 Positive_regulation denotes infusion
R566 T816 T817 themeOf phosphorylation,inhibition
R567 T818 T819 themeOf phosphorylation,mediated
R625 T799 T811 themeOf TNF p75 receptor,expression
R626 T800 T812 themeOf p65,phosphorylation
R627 T801 T814 themeOf TNF-α,Neutralization
R628 T802 T815 themeOf TNF p55 receptor,infusion
R629 T804 T816 themeOf p65,phosphorylation
R630 T806 T819 causeOf TNF-α,mediated
R631 T807 T818 themeOf p65,phosphorylation
R634 T812 T813 themeOf phosphorylation,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T990 1382-1430 Phosphorylation denotes TNF-α-mediated p65-Thr 485 NF-κB phosphorylation
T989 413-508 Positive_regulation denotes SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,
T988 413-508 Gene_expression denotes SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,
T986 879-924 Positive_regulation denotes only p65-Thr435 phosphorylation was increased
T985 879-910 Phosphorylation denotes only p65-Thr435 phosphorylation
T984 1382-1430 Regulation denotes TNF-α-mediated p65-Thr 485 NF-κB phosphorylation
T983 781-808 Gene_expression denotes TNF p75 receptor expression
T982 1351-1367 Entity denotes endothelial cell
T981 1224-1232 Entity denotes sTNFp55R
T980 1003-1010 Entity denotes antigen
T979 597-608 Entity denotes Fluoro-Jade
T978 825-864 Entity denotes endothelial cells as well as astrocytes
T977 604-608 Protein denotes Jade
T976 1382-1430 Entity denotes TNF-α-mediated p65-Thr 485 NF-κB phosphorylation
T975 744-749 Protein denotes TNF-α
T974 172-182 Entity denotes SE-induced
T973 1409-1414 Protein denotes NF-κB
T972 1028-1036 Protein denotes of TNF-α
T971 513-548 Protein denotes soluble TNF p55 receptor (sTNFp55R)
T970 90-92 Protein denotes PC
T969 1233-1241 Entity denotes infusion
T968 705-729 Entity denotes most activated microglia
T967 31-33 Entity denotes SE
T966 428-442 Entity denotes by pilocarpine
T965 540-543 Protein denotes TNF
T964 781-797 Protein denotes TNF p75 receptor
T963 928-978 Entity denotes endothelial cells accompanied by SMI-71 expression
T936 1159-1172 Entity denotes of p65-Thr435
T932 1037-1075 Protein denotes by soluble TNF p55 receptor (sTNFp55R)
T933 413-415 Protein denotes SE
T934 377-402 Entity denotes by pilocarpine-induced SE
T937 1529-1539 Entity denotes neutrophil
T939 884-894 Entity denotes p65-Thr435
T941 1261-1271 Entity denotes neutrophil
T942 539-547 Entity denotes sTNFp55R
T943 884-894 Protein denotes p65-Thr435
T944 597-608 Entity denotes Fluoro-Jade
T945 1450-1460 Entity denotes SE-induced
T946 1382-1430 Protein denotes TNF-α-mediated p65-Thr 485 NF-κB phosphorylation
T947 1096-1098 Entity denotes SE
T948 1159-1172 Protein denotes of p65-Thr435
T949 1288-1294 Protein denotes the PC
T950 558-560 Entity denotes SE
T951 854-864 Entity denotes astrocytes
T952 1076-1084 Entity denotes infusion
T953 1224-1232 Protein denotes sTNFp55R
T954 656-661 Protein denotes TNF-α
T955 1250-1260 Entity denotes SE-induced
T956 1382-1396 Protein denotes TNF-α-mediated
T957 666-671 Protein denotes NF-κB
T958 380-399 Entity denotes pilocarpine-induced
T959 226-258 Protein denotes of tumor necrosis factor (TNF)-α
T960 1192-1209 Entity denotes endothelial cells
T961 701-704 Protein denotes SE,
R600 T964 T983 themeOf TNF p75 receptor,TNF p75 receptor expression
R601 T966 T989 causeOf by pilocarpine,"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,"
R602 T973 T990 themeOf NF-κB,TNF-α-mediated p65-Thr 485 NF-κB phosphorylation
R603 T976 T973 partOf TNF-α-mediated p65-Thr 485 NF-κB phosphorylation,NF-κB
R604 T976 T990 siteOf TNF-α-mediated p65-Thr 485 NF-κB phosphorylation,TNF-α-mediated p65-Thr 485 NF-κB phosphorylation
R605 T985 T986 themeOf only p65-Thr435 phosphorylation,only p65-Thr435 phosphorylation was increased
R606 T990 T984 themeOf TNF-α-mediated p65-Thr 485 NF-κB phosphorylation,TNF-α-mediated p65-Thr 485 NF-κB phosphorylation
R653 T933 T988 themeOf SE,"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,"
R654 T933 T989 themeOf SE,"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,"
R656 T939 T943 partOf p65-Thr435,p65-Thr435
R657 T939 T985 siteOf p65-Thr435,only p65-Thr435 phosphorylation
R658 T943 T985 themeOf p65-Thr435,only p65-Thr435 phosphorylation
R659 T956 T984 causeOf TNF-α-mediated,TNF-α-mediated p65-Thr 485 NF-κB phosphorylation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T575 400-402 NNP denotes SE
T574 380-399 JJ denotes pilocarpine-induced
T573 377-379 IN denotes by
T572 368-376 VBN denotes provoked
T571 361-367 NNS denotes models
T570 352-360 NN denotes epilepsy
T569 348-351 NN denotes rat
T568 345-347 IN denotes in
T567 338-344 NNS denotes events
T566 330-337 JJ denotes related
T565 326-329 PRP$ denotes its
T564 322-325 CC denotes and
T563 316-321 NN denotes edema
T562 306-315 JJ denotes vasogenic
T561 299-305 IN denotes during
T560 288-298 NN denotes disruption
T559 286-287 -RRB- denotes )
T558 283-286 NNP denotes BBB
T557 282-283 -LRB- denotes (
T556 274-281 NN denotes barrier
T555 262-273 JJ denotes blood-brain
T554 259-261 IN denotes in
T553 257-258 NN denotes α
T552 256-257 : denotes -
T551 255-256 -RRB- denotes )
T550 252-255 NNP denotes TNF
T549 251-252 -LRB- denotes (
T548 244-250 NN denotes factor
T547 235-243 NN denotes necrosis
T546 229-234 NN denotes tumor
T545 226-228 IN denotes of
T544 220-225 NNS denotes roles
T543 216-219 DT denotes the
T542 203-215 VBD denotes investigated
T541 200-202 PRP denotes we
T540 198-199 , denotes ,
T539 193-198 NN denotes edema
T538 183-192 JJ denotes vasogenic
T537 172-182 JJ denotes SE-induced
T536 169-171 IN denotes of
T535 159-168 NN denotes mechanism
T534 155-158 DT denotes the
T533 145-154 VB denotes elucidate
T532 142-144 TO denotes To
T531 140-141 . denotes .
T530 133-140 NNS denotes damages
T529 122-132 JJ denotes astroglial
T528 118-121 CC denotes and
T527 109-117 JJ denotes neuronal
T526 106-108 IN denotes by
T525 94-105 VBN denotes accompanied
T524 92-93 -RRB- denotes )
T523 90-92 NN denotes PC
T522 89-90 -LRB- denotes (
T521 82-88 NN denotes cortex
T520 73-81 NN denotes piriform
T519 69-72 DT denotes the
T518 66-68 IN denotes in
T517 60-65 NN denotes edema
T516 50-59 JJ denotes vasogenic
T515 43-49 JJ denotes severe
T514 35-42 VBZ denotes induces
T513 33-34 -RRB- denotes )
T512 31-33 FW denotes SE
T511 30-31 -LRB- denotes (
T510 18-29 NN denotes epilepticus
T509 11-17 NNP denotes Status
T508 0-10 NNP denotes Background
T749 1581-1582 . denotes .
T748 1577-1581 NN denotes loss
T747 1557-1576 JJ denotes neuronal-astroglial
T746 1553-1556 CC denotes and
T745 1540-1552 NN denotes infiltration
T744 1529-1539 NN denotes neutrophil
T743 1519-1528 JJ denotes extensive
T742 1516-1518 IN denotes in
T741 1508-1515 NNS denotes results
T740 1502-1507 NN denotes edema
T739 1492-1501 JJ denotes vasogenic
T738 1490-1491 , denotes ,
T737 1478-1490 RB denotes Subsequently
T736 1476-1477 . denotes .
T735 1471-1476 NN denotes edema
T734 1461-1470 JJ denotes vasogenic
T733 1450-1460 JJ denotes SE-induced
T732 1447-1449 IN denotes in
T731 1438-1446 VBN denotes involved
T730 1435-1437 VB denotes be
T729 1431-1434 MD denotes may
T728 1415-1430 NN denotes phosphorylation
T727 1409-1414 NN denotes NF-κB
T726 1405-1408 CD denotes 485
T725 1397-1404 NN denotes p65-Thr
T724 1382-1396 JJ denotes TNF-α-mediated
T723 1378-1381 IN denotes via
T722 1368-1377 NNS denotes functions
T721 1363-1367 NN denotes cell
T720 1351-1362 JJ denotes endothelial
T719 1348-1350 IN denotes of
T718 1336-1347 NNS denotes impairments
T717 1331-1335 IN denotes that
T716 1323-1330 VBP denotes suggest
T715 1314-1322 NNS denotes findings
T714 1308-1313 DT denotes These
T713 1297-1307 NNP denotes Conclusion
T712 1294-1295 . denotes .
T711 1292-1294 NN denotes PC
T710 1288-1291 DT denotes the
T709 1285-1287 IN denotes in
T708 1272-1284 NN denotes infiltration
T707 1261-1271 NN denotes neutrophil
T706 1250-1260 JJ denotes SE-induced
T705 1242-1249 VBN denotes reduced
T704 1233-1241 NN denotes infusion
T703 1224-1232 JJ denotes sTNFp55R
T702 1222-1223 , denotes ,
T701 1211-1222 RB denotes Furthermore
T700 1209-1210 . denotes .
T699 1204-1209 NNS denotes cells
T698 1192-1203 JJ denotes endothelial
T697 1189-1191 IN denotes in
T696 1173-1188 NN denotes phosphorylation
T695 1162-1172 NN denotes p65-Thr435
T694 1159-1161 IN denotes of
T693 1148-1158 NN denotes inhibition
T692 1144-1147 IN denotes via
T691 1136-1143 NNS denotes damages
T690 1127-1135 JJ denotes neuronal
T689 1123-1126 CC denotes and
T688 1117-1122 NN denotes edema
T687 1107-1116 JJ denotes vasogenic
T686 1096-1106 JJ denotes SE-induced
T685 1085-1095 VBD denotes attenuated
T684 1076-1084 NN denotes infusion
T683 1074-1075 -RRB- denotes )
T682 1066-1074 JJ denotes sTNFp55R
T681 1065-1066 -LRB- denotes (
T680 1056-1064 NN denotes receptor
T679 1052-1055 NN denotes p55
T678 1048-1051 NNP denotes TNF
T677 1040-1047 JJ denotes soluble
T676 1037-1039 IN denotes by
T675 1031-1036 JJ denotes TNF-α
T674 1028-1030 IN denotes of
T673 1013-1027 NN denotes Neutralization
T672 1011-1012 . denotes .
T671 1010-1011 -RRB- denotes )
T670 1003-1010 NN denotes antigen
T669 995-1002 NN denotes barrier
T668 983-994 JJ denotes endothelial
T667 980-982 DT denotes an
T666 979-980 -LRB- denotes (
T665 968-978 NN denotes expression
T664 961-967 NNP denotes SMI-71
T663 958-960 IN denotes by
T662 946-957 VBN denotes accompanied
T661 940-945 NNS denotes cells
T660 928-939 JJ denotes endothelial
T659 925-927 IN denotes in
T658 915-924 VBN denotes increased
T657 911-914 VBD denotes was
T656 895-910 NN denotes phosphorylation
T655 884-894 JJ denotes p65-Thr435
T654 879-883 RB denotes only
T653 877-878 , denotes ,
T652 869-877 NN denotes addition
T651 866-868 IN denotes In
T650 864-865 . denotes .
T649 854-864 NNS denotes astrocytes
T648 851-853 IN denotes as
T647 846-850 RB denotes well
T646 843-845 RB denotes as
T645 837-842 NNS denotes cells
T644 825-836 JJ denotes endothelial
T643 822-824 IN denotes in
T642 813-821 VBN denotes detected
T641 809-812 VBD denotes was
T640 798-808 NN denotes expression
T639 789-797 NN denotes receptor
T638 785-788 NN denotes p75
T637 781-784 NNP denotes TNF
T636 779-780 , denotes ,
T635 771-779 NN denotes addition
T634 768-770 IN denotes In
T633 766-767 . denotes .
T632 750-766 NN denotes immunoreactivity
T631 744-749 JJ denotes TNF-α
T630 737-743 JJ denotes strong
T629 730-736 VBD denotes showed
T628 720-729 NN denotes microglia
T627 710-719 VBN denotes activated
T626 705-709 JJS denotes most
T625 703-704 , denotes ,
T624 701-703 NNP denotes SE
T623 691-700 VBG denotes Following
T622 683-690 NNS denotes Results
T621 680-681 . denotes .
T620 672-680 NNS denotes subunits
T619 666-671 NNP denotes NF-κB
T618 662-665 CC denotes and
T617 656-661 NNP denotes TNF-α
T616 652-655 IN denotes for
T615 644-651 NNS denotes studies
T614 624-643 JJ denotes immunohistochemical
T613 620-623 CC denotes and
T612 611-619 VBG denotes staining
T611 609-610 NNP denotes B
T610 597-608 NNP denotes Fluoro-Jade
T609 587-596 VBD denotes performed
T608 584-586 PRP denotes we
T607 582-583 , denotes ,
T606 572-582 RB denotes Thereafter
T605 570-571 . denotes .
T604 561-570 NN denotes induction
T603 558-560 VB denotes SE
T602 555-557 TO denotes to
T601 549-554 RB denotes prior
T600 547-548 -RRB- denotes )
T599 539-547 JJ denotes sTNFp55R
T598 538-539 -LRB- denotes (
T597 529-537 NN denotes receptor
T596 525-528 NN denotes p55
T595 521-524 NNP denotes TNF
T594 513-520 JJ denotes soluble
T593 509-512 CC denotes and
T592 507-508 , denotes ,
T591 506-507 : denotes -
T590 500-506 NN denotes saline
T589 495-499 IN denotes with
T588 487-494 VBN denotes infused
T587 461-486 RB denotes intracerebroventricularly
T586 456-460 VBD denotes were
T585 451-455 WDT denotes that
T584 446-450 NNS denotes rats
T583 443-445 IN denotes in
T582 431-442 NN denotes pilocarpine
T581 428-430 IN denotes by
T580 420-427 VBN denotes induced
T579 416-419 VBD denotes was
T578 413-415 NNP denotes SE
T577 405-412 NNP denotes Methods
T576 402-403 . denotes .
R314 T508 T509 compound Background,Status
R315 T509 T510 compound Status,epilepticus
R317 T511 T512 punct (,SE
R318 T512 T510 appos SE,epilepticus
R319 T513 T510 punct ),epilepticus
R321 T515 T517 amod severe,edema
R322 T516 T517 amod vasogenic,edema
R323 T517 T514 dobj edema,induces
R324 T518 T514 prep in,induces
R325 T519 T521 det the,cortex
R326 T520 T521 compound piriform,cortex
R327 T521 T518 pobj cortex,in
R328 T522 T521 punct (,cortex
R329 T523 T521 appos PC,cortex
R330 T524 T521 punct ),cortex
R331 T525 T514 advcl accompanied,induces
R332 T526 T525 agent by,accompanied
R333 T527 T530 amod neuronal,damages
R334 T528 T527 cc and,neuronal
R335 T529 T527 conj astroglial,neuronal
R336 T530 T526 pobj damages,by
R338 T532 T533 aux To,elucidate
R339 T533 T542 advcl elucidate,investigated
R340 T534 T535 det the,mechanism
R341 T535 T533 dobj mechanism,elucidate
R342 T536 T535 prep of,mechanism
R343 T537 T539 amod SE-induced,edema
R344 T538 T539 amod vasogenic,edema
R345 T539 T536 pobj edema,of
R346 T540 T542 punct ",",investigated
R347 T541 T542 nsubj we,investigated
R348 T542 T542 ROOT investigated,investigated
R349 T543 T544 det the,roles
R350 T544 T542 dobj roles,investigated
R351 T545 T544 prep of,roles
R352 T546 T547 compound tumor,necrosis
R353 T547 T548 compound necrosis,factor
R354 T548 T545 pobj factor,of
R355 T549 T550 punct (,TNF
R356 T550 T548 appos TNF,factor
R357 T551 T550 punct ),TNF
R358 T552 T553 punct -,α
R359 T553 T544 conj α,roles
R360 T554 T553 prep in,α
R361 T555 T556 amod blood-brain,barrier
R362 T556 T554 pobj barrier,in
R363 T557 T558 punct (,BBB
R364 T558 T553 appos BBB,α
R365 T559 T553 punct ),α
R366 T560 T542 npadvmod disruption,investigated
R367 T561 T560 prep during,disruption
R368 T562 T563 amod vasogenic,edema
R369 T563 T561 pobj edema,during
R370 T564 T563 cc and,edema
R371 T565 T567 poss its,events
R372 T566 T567 amod related,events
R373 T567 T563 conj events,edema
R374 T568 T567 prep in,events
R375 T569 T571 compound rat,models
R376 T570 T571 compound epilepsy,models
R377 T571 T568 pobj models,in
R378 T572 T571 acl provoked,models
R379 T573 T572 agent by,provoked
R380 T574 T575 amod pilocarpine-induced,SE
R381 T575 T573 pobj SE,by
R382 T576 T542 punct .,investigated
R383 T577 T578 compound Methods,SE
R384 T578 T580 nsubjpass SE,induced
R385 T579 T580 auxpass was,induced
R386 T580 T580 ROOT induced,induced
R387 T581 T580 agent by,induced
R388 T582 T581 pobj pilocarpine,by
R389 T583 T580 prep in,induced
R390 T584 T583 pobj rats,in
R391 T585 T588 nsubjpass that,infused
R392 T586 T588 auxpass were,infused
R393 T587 T588 advmod intracerebroventricularly,infused
R394 T588 T584 relcl infused,rats
R395 T589 T588 prep with,infused
R396 T590 T589 pobj saline,with
R397 T591 T590 punct -,saline
R398 T592 T590 punct ",",saline
R399 T593 T590 cc and,saline
R400 T594 T590 conj soluble,saline
R401 T595 T597 nmod TNF,receptor
R402 T596 T597 compound p55,receptor
R403 T597 T590 conj receptor,saline
R404 T598 T597 punct (,receptor
R405 T599 T597 appos sTNFp55R,receptor
R406 T600 T597 punct ),receptor
R407 T601 T588 advmod prior,infused
R408 T602 T601 prep to,prior
R409 T603 T604 compound SE,induction
R410 T604 T602 pobj induction,to
R411 T605 T580 punct .,induced
R412 T606 T609 advmod Thereafter,performed
R413 T607 T609 punct ",",performed
R414 T608 T609 nsubj we,performed
R415 T609 T609 ROOT performed,performed
R416 T610 T611 compound Fluoro-Jade,B
R453 T647 T648 advmod well,as
R454 T648 T645 cc as,cells
R455 T649 T645 conj astrocytes,cells
R456 T650 T642 punct .,detected
R457 T651 T658 prep In,increased
R458 T652 T651 pobj addition,In
R459 T653 T658 punct ",",increased
R510 T704 T705 nsubj infusion,reduced
R511 T705 T705 ROOT reduced,reduced
R512 T706 T708 amod SE-induced,infiltration
R513 T707 T708 compound neutrophil,infiltration
R514 T708 T705 dobj infiltration,reduced
R515 T709 T705 prep in,reduced
R516 T710 T711 det the,PC
R517 T711 T709 pobj PC,in
R528 T722 T719 pobj functions,of
R529 T723 T718 prep via,impairments
R530 T724 T728 amod TNF-α-mediated,phosphorylation
R531 T725 T728 nmod p65-Thr,phosphorylation
R553 T747 T748 amod neuronal-astroglial,loss
R554 T748 T745 conj loss,infiltration
R555 T749 T741 punct .,results
R532 T726 T728 nummod 485,phosphorylation
R533 T727 T728 compound NF-κB,phosphorylation
R534 T728 T723 pobj phosphorylation,via
R535 T729 T731 aux may,involved
R536 T730 T731 auxpass be,involved
R537 T731 T716 ccomp involved,suggest
R538 T732 T731 prep in,involved
R539 T733 T735 amod SE-induced,edema
R540 T734 T735 amod vasogenic,edema
R541 T735 T732 pobj edema,in
R542 T736 T716 punct .,suggest
R543 T737 T741 advmod Subsequently,results
R544 T738 T741 punct ",",results
R545 T739 T741 amod vasogenic,results
R546 T740 T741 compound edema,results
R547 T741 T741 ROOT results,results
R548 T742 T741 prep in,results
R549 T743 T745 amod extensive,infiltration
R550 T744 T745 compound neutrophil,infiltration
R551 T745 T742 pobj infiltration,in
R552 T746 T745 cc and,infiltration
R417 T611 T609 dobj B,performed
R418 T612 T609 prep staining,performed
R419 T613 T612 cc and,staining
R420 T614 T615 amod immunohistochemical,studies
R421 T615 T612 conj studies,staining
R422 T616 T615 prep for,studies
R423 T617 T620 nmod TNF-α,subunits
R424 T618 T617 cc and,TNF-α
R425 T619 T617 conj NF-κB,TNF-α
R426 T620 T616 pobj subunits,for
R427 T621 T609 punct .,performed
R428 T622 T622 ROOT Results,Results
R429 T623 T629 prep Following,showed
R430 T624 T623 pobj SE,Following
R431 T625 T629 punct ",",showed
R432 T626 T627 advmod most,activated
R433 T627 T628 amod activated,microglia
R434 T628 T629 nsubj microglia,showed
R435 T629 T629 ROOT showed,showed
R436 T630 T632 amod strong,immunoreactivity
R437 T631 T632 amod TNF-α,immunoreactivity
R438 T632 T629 dobj immunoreactivity,showed
R439 T633 T629 punct .,showed
R440 T634 T642 prep In,detected
R441 T635 T634 pobj addition,In
R442 T636 T642 punct ",",detected
R443 T637 T640 compound TNF,expression
R444 T638 T640 compound p75,expression
R445 T639 T640 compound receptor,expression
R446 T640 T642 nsubjpass expression,detected
R447 T641 T642 auxpass was,detected
R448 T642 T642 ROOT detected,detected
R449 T643 T642 prep in,detected
R450 T644 T645 amod endothelial,cells
R451 T645 T643 pobj cells,in
R452 T646 T648 advmod as,as
R460 T654 T656 advmod only,phosphorylation
R461 T655 T656 amod p65-Thr435,phosphorylation
R462 T656 T658 nsubjpass phosphorylation,increased
R463 T657 T658 auxpass was,increased
R464 T658 T658 ROOT increased,increased
R465 T659 T658 prep in,increased
R466 T660 T661 amod endothelial,cells
R467 T661 T659 pobj cells,in
R468 T662 T661 acl accompanied,cells
R469 T663 T662 agent by,accompanied
R470 T664 T665 compound SMI-71,expression
R471 T665 T663 pobj expression,by
R472 T666 T665 punct (,expression
R473 T667 T670 det an,antigen
R474 T668 T670 amod endothelial,antigen
R475 T669 T670 compound barrier,antigen
R476 T670 T665 appos antigen,expression
R477 T671 T665 punct ),expression
R478 T672 T658 punct .,increased
R479 T673 T685 nsubj Neutralization,attenuated
R480 T674 T673 prep of,Neutralization
R481 T675 T674 pobj TNF-α,of
R482 T676 T673 prep by,Neutralization
R483 T677 T680 amod soluble,receptor
R484 T678 T680 nmod TNF,receptor
R485 T679 T680 compound p55,receptor
R486 T680 T684 nmod receptor,infusion
R487 T681 T682 punct (,sTNFp55R
R488 T682 T680 appos sTNFp55R,receptor
R489 T683 T680 punct ),receptor
R490 T684 T676 pobj infusion,by
R491 T685 T685 ROOT attenuated,attenuated
R492 T686 T688 nmod SE-induced,edema
R493 T687 T688 amod vasogenic,edema
R494 T688 T685 dobj edema,attenuated
R495 T689 T688 cc and,edema
R496 T690 T691 amod neuronal,damages
R497 T691 T688 conj damages,edema
R498 T692 T685 prep via,attenuated
R499 T693 T692 pobj inhibition,via
R500 T694 T693 prep of,inhibition
R501 T695 T696 compound p65-Thr435,phosphorylation
R502 T696 T694 pobj phosphorylation,of
R503 T697 T696 prep in,phosphorylation
R504 T698 T699 amod endothelial,cells
R505 T699 T697 pobj cells,in
R506 T700 T685 punct .,attenuated
R507 T701 T705 advmod Furthermore,reduced
R508 T702 T705 punct ",",reduced
R509 T703 T704 amod sTNFp55R,infusion
R518 T712 T705 punct .,reduced
R519 T713 T716 advmod Conclusion,suggest
R520 T714 T715 det These,findings
R521 T715 T716 nsubj findings,suggest
R522 T716 T716 ROOT suggest,suggest
R523 T717 T731 mark that,involved
R524 T718 T731 nsubjpass impairments,involved
R525 T719 T718 prep of,impairments
R526 T720 T722 amod endothelial,functions
R527 T721 T722 compound cell,functions

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T874 1415-1430 Phosphorylation denotes phosphorylation
T873 1415-1430 Phosphorylation denotes phosphorylation
T872 1412-1414 Protein denotes κB
T871 1382-1411 Protein denotes TNF-α-mediated p65-Thr 485 NF
T870 1224-1232 Protein denotes sTNFp55R
T869 1148-1158 Negative_regulation denotes inhibition
T868 1148-1158 Negative_regulation denotes inhibition
T867 1173-1188 Phosphorylation denotes phosphorylation
T866 1173-1188 Phosphorylation denotes phosphorylation
T865 1013-1027 Negative_regulation denotes Neutralization
T864 1166-1172 Protein denotes Thr435
T863 1162-1165 Protein denotes p65
T862 1066-1074 Protein denotes sTNFp55R
T861 1048-1064 Protein denotes TNF p55 receptor
T860 1031-1036 Protein denotes TNF-α
T859 915-924 Positive_regulation denotes increased
T858 915-924 Positive_regulation denotes increased
T857 895-910 Phosphorylation denotes phosphorylation
T856 895-910 Phosphorylation denotes phosphorylation
T855 888-894 Protein denotes Thr435
T854 884-887 Protein denotes p65
T853 798-808 Gene_expression denotes expression
T852 781-797 Protein denotes TNF p75 receptor
T851 744-749 Protein denotes TNF-α
T850 666-680 Protein denotes NF-κB subunits
T849 656-661 Protein denotes TNF-α
T846 229-258 Protein denotes tumor necrosis factor (TNF)-α
T847 521-537 Protein denotes TNF p55 receptor
T848 539-547 Protein denotes sTNFp55R
R576 T866 T868 themeOf phosphorylation,inhibition
R577 T867 T869 themeOf phosphorylation,inhibition
R578 T868 T865 Cause inhibition,Neutralization
R579 T869 T865 Cause inhibition,Neutralization
R580 T871 T873 themeOf TNF-α-mediated p65-Thr 485 NF,phosphorylation
R581 T872 T874 themeOf κB,phosphorylation
R568 T852 T853 themeOf TNF p75 receptor,expression
R569 T854 T856 themeOf p65,phosphorylation
R570 T855 T857 themeOf Thr435,phosphorylation
R571 T856 T858 themeOf phosphorylation,increased
R572 T857 T859 themeOf phosphorylation,increased
R573 T860 T865 themeOf TNF-α,Neutralization
R574 T863 T866 themeOf p65,phosphorylation
R575 T864 T867 themeOf Thr435,phosphorylation

testone

Id Subject Object Predicate Lexical cue
T19 229-258 Protein denotes tumor necrosis factor (TNF)-α
T20 521-537 Protein denotes TNF p55 receptor
T21 540-547 Protein denotes TNFp55R
T22 656-661 Protein denotes TNF-α
T23 744-749 Protein denotes TNF-α
T24 781-797 Protein denotes TNF p75 receptor
T25 884-887 Protein denotes p65
T26 1031-1036 Protein denotes TNF-α
T27 1048-1064 Protein denotes TNF p55 receptor
T28 1067-1074 Protein denotes TNFp55R
T29 1162-1165 Protein denotes p65
T30 1225-1232 Protein denotes TNFp55R
T31 1382-1387 Protein denotes TNF-α
T32 1397-1400 Protein denotes p65
T35 288-298 Negative_regulation denotes disruption
T36 392-399 Positive_regulation denotes induced
T37 420-427 Positive_regulation denotes induced
T38 561-570 Positive_regulation denotes induction
T39 611-619 Gene_expression denotes staining
T40 798-808 Gene_expression denotes expression
T41 895-910 Phosphorylation denotes phosphorylation
T42 915-924 Positive_regulation denotes increased
T43 968-978 Gene_expression denotes expression
T44 1013-1027 Negative_regulation denotes Neutralization
T45 1148-1158 Negative_regulation denotes inhibition
T46 1173-1188 Phosphorylation denotes phosphorylation
T47 1388-1396 Positive_regulation denotes mediated
T48 1415-1430 Phosphorylation denotes phosphorylation
R3 T20 T38 themeOf TNF p55 receptor,induction
R4 T24 T40 themeOf TNF p75 receptor,expression
R5 T25 T41 themeOf p65,phosphorylation
R6 T26 T44 themeOf TNF-α,Neutralization
R7 T27 T44 causeOf TNF p55 receptor,Neutralization
R8 T29 T46 themeOf p65,phosphorylation
R9 T31 T47 causeOf TNF-α,mediated
R10 T32 T48 themeOf p65,phosphorylation
R12 T41 T42 themeOf phosphorylation,increased
R13 T43 T42 causeOf expression,increased
R14 T46 T45 themeOf phosphorylation,inhibition
R15 T48 T47 themeOf phosphorylation,mediated

test3

Id Subject Object Predicate Lexical cue
T93 1415-1430 Phosphorylation denotes phosphorylation
T92 1397-1400 Protein denotes p65
T91 1388-1396 Positive_regulation denotes mediated
T90 1382-1387 Protein denotes TNF-α
T89 1224-1232 Protein denotes sTNFp55R
T88 1173-1188 Phosphorylation denotes phosphorylation
T87 1162-1165 Protein denotes p65
T86 1148-1158 Negative_regulation denotes inhibition
T85 1066-1074 Protein denotes sTNFp55R
T84 1048-1064 Protein denotes TNF p55 receptor
T83 1031-1036 Protein denotes TNF-α
T82 1013-1027 Negative_regulation denotes Neutralization
T81 968-978 Gene_expression denotes expression
T80 915-924 Positive_regulation denotes increased
T79 895-910 Phosphorylation denotes phosphorylation
T78 884-887 Protein denotes p65
T77 798-808 Gene_expression denotes expression
T76 781-797 Protein denotes TNF p75 receptor
T75 744-749 Protein denotes TNF-α
T74 656-661 Protein denotes TNF-α
T73 561-570 Positive_regulation denotes induction
T72 539-547 Protein denotes sTNFp55R
T71 521-537 Protein denotes TNF p55 receptor
T51 229-258 Protein denotes tumor necrosis factor (TNF)-α
T52 521-537 Protein denotes TNF p55 receptor
T53 540-547 Protein denotes TNFp55R
T54 656-661 Protein denotes TNF-α
T55 744-749 Protein denotes TNF-α
T56 781-797 Protein denotes TNF p75 receptor
T57 884-887 Protein denotes p65
T58 1031-1036 Protein denotes TNF-α
T59 1048-1064 Protein denotes TNF p55 receptor
T60 1067-1074 Protein denotes TNFp55R
T61 1162-1165 Protein denotes p65
T62 1225-1232 Protein denotes TNFp55R
T63 1382-1387 Protein denotes TNF-α
T64 1397-1400 Protein denotes p65
T69 229-258 Protein denotes tumor necrosis factor (TNF)-α
T70 420-427 Positive_regulation denotes induced
R33 T93 T91 themeOf phosphorylation,mediated
R27 T84 T82 causeOf TNF p55 receptor,Neutralization
R28 T85 T84 equivalentTo sTNFp55R,TNF p55 receptor
R29 T87 T88 themeOf p65,phosphorylation
R30 T88 T86 themeOf phosphorylation,inhibition
R31 T90 T91 causeOf TNF-α,mediated
R32 T92 T93 themeOf p65,phosphorylation
R19 T71 T70 causeOf TNF p55 receptor,induced
R20 T71 T73 themeOf TNF p55 receptor,induction
R21 T72 T71 equivalentTo sTNFp55R,TNF p55 receptor
R22 T76 T77 themeOf TNF p75 receptor,expression
R23 T78 T79 themeOf p65,phosphorylation
R24 T79 T80 themeOf phosphorylation,increased
R25 T81 T80 causeOf expression,increased
R26 T83 T82 themeOf TNF-α,Neutralization