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PMC:3312845 / 20986-21935 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8926 947-948 -RRB- denotes )
T8925 945-947 NN denotes 5B
T8924 938-944 NN denotes Figure
T8923 936-937 -COMMA- denotes ,
T8922 932-936 CD denotes 0.05
T8921 930-931 SYM denotes <
T8920 928-929 NN denotes p
T8919 927-928 -LRB- denotes (
T8918 918-926 NN denotes infusion
T8917 911-917 NN denotes saline
T8916 908-910 TO denotes to
T8915 899-907 VB denotes compared
T8914 897-898 -COMMA- denotes ,
T8913 892-897 NN denotes cells
T8912 880-891 JJ denotes endothelial
T8911 877-879 IN denotes in
T8910 861-876 NN denotes phosphorylation
T8909 850-860 NN denotes p65-Thr435
T8908 839-849 JJ denotes SE-induced
T8907 828-838 VB denotes alleviated
T8906 816-827 RB denotes effectively
T8905 807-815 NN denotes infusion
T8904 798-806 NN denotes sTNFp55R
T8903 796-797 -COMMA- denotes ,
T8902 788-796 NN denotes addition
T8901 785-787 IN denotes In
T8900 782-783 -RRB- denotes )
T8899 780-782 NN denotes 5A
T8898 773-779 NN denotes Figure
T8897 772-773 -LRB- denotes (
T8896 769-771 NN denotes SE
T8895 763-768 IN denotes after
T8894 760-762 NN denotes hr
T8893 757-759 CD denotes 12
T8892 749-756 NN denotes animals
T8891 734-748 JJ denotes saline-infused
T8890 731-733 IN denotes of
T8889 728-730 NN denotes PC
T8888 724-727 DT denotes the
T8887 717-723 IN denotes within
T8886 715-716 -RRB- denotes )
T8885 705-715 NN denotes astrocytes
T8884 701-704 RB denotes not
T8883 700-701 -LRB- denotes (
T8882 694-699 NN denotes cells
T8881 682-693 JJ denotes endothelial
T8880 679-681 IN denotes in
T8879 669-678 VB denotes increased
T8878 665-668 VB denotes was
T8877 649-664 NN denotes phosphorylation
T8876 638-648 NN denotes p65-Thr435
T8875 636-637 -COMMA- denotes ,
T8874 628-636 NN denotes contrast
T8873 625-627 IN denotes In
T8872 598-599 -RRB- denotes l
T8871 596-598 NN denotes ry
T8870 593-596 CC denotes pho
T8869 592-593 CD denotes s
T8868 585-592 NN denotes 536 pho
T8867 584-585 -LRB- denotes r
T8866 569-584 NN denotes er529 or p65-Se
T8865 559-569 NN denotes fect p65-S
T8864 557-559 CC denotes af
T8863 547-557 NN denotes could not
T8862 541-547 VB denotes le it
T8861 538-541 RB denotes whi
T8860 532-537 MD denotes ely),
T8859 530-532 PRP denotes iv
T8858 525-530 IN denotes spect
T8857 524-525 -COMMA- denotes e
T8856 523-524 -RRB- denotes r
T8855 510-522 RB denotes n (p < 0.05,
T8854 509-510 -COMMA- denotes o
T8853 505-509 CD denotes lati
T8852 504-505 SYM denotes y
T8851 503-504 NN denotes r
T8850 502-503 -LRB- denotes o
T8849 487-502 NN denotes 5-Ser311 phosph
T8848 477-487 NN denotes 276 and p6
T8847 474-477 CC denotes Ser
T8846 464-474 NN denotes duced p65-
T8845 457-464 VB denotes vely re
T8844 446-457 RB denotes ion effecti
T8843 438-446 NN denotes 5R infus
T8842 430-438 NN denotes . sTNFp5
T8841 429-430 -RRB- denotes )
T8840 424-429 NN denotes cells
T8839 412-423 JJ denotes endothelial
T8838 408-411 RB denotes not
T8837 407-408 -LRB- denotes (
T8836 396-406 NN denotes astrocytes
T8835 393-395 IN denotes in
T8834 377-392 NN denotes phosphorylation
T8833 366-376 NN denotes p65-Ser536
T8832 362-365 CC denotes and
T8831 360-361 -COMMA- denotes ,
T8830 350-360 NN denotes p65-Ser529
T8829 348-349 -COMMA- denotes ,
T8828 338-348 NN denotes p65-Ser311
T8827 336-337 -COMMA- denotes ,
T8826 326-336 NN denotes p65-Ser276
T8825 319-325 VB denotes showed
T8824 313-318 NN denotes group
T8823 298-312 JJ denotes saline-infused
T8822 294-297 DT denotes the
T8821 291-293 IN denotes of
T8820 283-290 NN denotes animals
T8819 280-282 NN denotes SE
T8818 272-279 JJ denotes hr-post
T8817 269-271 CD denotes 12
T8816 267-268 -COMMA- denotes ,
T8815 266-267 -RRB- denotes )
T8814 261-266 VB denotes shown
T8813 257-260 RB denotes not
T8812 252-256 NN denotes data
T8811 251-252 -LRB- denotes (
T8810 243-250 NN denotes animals
T8809 236-242 JJ denotes non-SE
T8808 233-235 TO denotes to
T8807 224-232 VB denotes Compared
T8806 212-222 NN denotes antibodies
T8805 198-211 NN denotes phospho-NF-κB
T8804 193-197 CD denotes five
T8803 187-192 VB denotes using
T8802 181-186 NN denotes study
T8801 161-180 JJ denotes immunohistochemical
T8800 158-160 DT denotes an
T8799 148-157 VB denotes performed
T8798 145-147 PRP denotes we
T8797 143-144 -COMMA- denotes ,
T8796 141-143 NN denotes SE
T8795 131-140 VB denotes following
T8794 121-130 NN denotes signaling
T8793 106-120 JJ denotes TNF-α-mediated
T8792 98-105 VB denotes confirm
T8791 95-97 TO denotes To
T8790 88-93 NN denotes NF-κB
T8789 85-87 IN denotes of
T8788 69-84 NN denotes phosphorylation
T8787 62-68 IN denotes toward
T8786 54-61 NN denotes stimuli
T8785 48-53 JJ denotes major
T8784 44-47 DT denotes the
T8783 41-43 IN denotes of
T8782 37-40 CD denotes one
T8781 34-36 VB denotes is
T8780 28-33 NN denotes TNF-α
T8779 23-27 IN denotes that
T8778 11-22 VB denotes established
T8777 6-10 RB denotes well
T8776 3-5 VB denotes is
T8775 0-2 PRP denotes It
R7161 T8775 T8776 arg1Of It,is
R7162 T8775 T8778 arg2Of It,established
R7163 T8778 T8776 arg2Of established,is
R7164 T8778 T8777 arg1Of established,well
R7165 T8780 T8781 arg1Of TNF-α,is
R7166 T8781 T8778 arg3Of is,established
R7167 T8781 T8779 arg1Of is,that
R7168 T8782 T8781 arg2Of one,is
R7169 T8782 T8783 arg1Of one,of
R7170 T8786 T8783 arg2Of stimuli,of
R7171 T8786 T8784 arg1Of stimuli,the
R7172 T8786 T8785 arg1Of stimuli,major
R7173 T8786 T8787 arg1Of stimuli,toward
R7174 T8786 T8789 arg1Of stimuli,of
R7175 T8788 T8787 arg2Of phosphorylation,toward
R7176 T8790 T8789 arg2Of NF-κB,of
R7177 T8792 T8791 arg1Of confirm,To
R7178 T8794 T8792 arg2Of signaling,confirm
R7179 T8794 T8793 arg1Of signaling,TNF-α-mediated
R7180 T8794 T8795 arg1Of signaling,following
R7181 T8796 T8795 arg2Of SE,following
R7182 T8798 T8792 arg1Of we,confirm
R7183 T8798 T8799 arg1Of we,performed
R7184 T8799 T8791 modOf performed,To
R7185 T8799 T8797 arg1Of performed,","
R7186 T8802 T8799 arg2Of study,performed
R7187 T8802 T8800 arg1Of study,an
R7188 T8802 T8801 arg1Of study,immunohistochemical
R7189 T8802 T8803 arg1Of study,using
R7190 T8806 T8803 arg2Of antibodies,using
R7191 T8806 T8804 arg1Of antibodies,five
R7192 T8806 T8805 arg1Of antibodies,phospho-NF-κB
R7193 T8808 T8807 arg2Of to,Compared
R7194 T8810 T8808 arg2Of animals,to
R7195 T8810 T8809 arg1Of animals,non-SE
R7196 T8810 T8811 arg1Of animals,(
R7197 T8812 T8811 arg2Of data,(
R7198 T8812 T8814 arg2Of data,shown
R7199 T8814 T8813 arg1Of shown,not
R7200 T8815 T8811 arg3Of ),(
R7201 T8820 T8817 arg1Of animals,12
R7202 T8820 T8818 arg1Of animals,hr-post
R7203 T8820 T8819 arg1Of animals,SE
R7204 T8820 T8821 arg1Of animals,of
R7205 T8820 T8825 arg1Of animals,showed
R7206 T8824 T8821 arg2Of group,of
R7207 T8824 T8822 arg1Of group,the
R7208 T8824 T8823 arg1Of group,saline-infused
R7209 T8826 T8827 arg1Of p65-Ser276,","
R7210 T8827 T8829 arg1Of ",",","
R7211 T8828 T8827 arg2Of p65-Ser311,","
R7212 T8829 T8832 arg1Of ",",and
R7213 T8830 T8829 arg2Of p65-Ser529,","
R7214 T8832 T8825 arg2Of and,showed
R7215 T8832 T8831 arg1Of and,","
R7216 T8832 T8835 arg1Of and,in
R7217 T8834 T8832 arg2Of phosphorylation,and
R7218 T8834 T8833 arg1Of phosphorylation,p65-Ser536
R7219 T8836 T8835 arg2Of astrocytes,in
R7220 T8836 T8837 arg1Of astrocytes,(
R7221 T8840 T8837 arg2Of cells,(
R7222 T8840 T8838 arg1Of cells,not
R7223 T8840 T8839 arg1Of cells,endothelial
R7224 T8841 T8837 arg3Of ),(
R7225 T8843 T8842 arg1Of 5R infus,. sTNFp5
R7226 T8843 T8845 arg1Of 5R infus,vely re
R7227 T8845 T8807 arg1Of vely re,Compared
R7228 T8845 T8816 arg1Of vely re,","
R7229 T8845 T8825 arg3Of vely re,showed
R7230 T8845 T8844 arg1Of vely re,ion effecti
R7231 T8845 T8857 arg1Of vely re,e
R7232 T8845 T8858 arg1Of vely re,spect
R7233 T8846 T8847 arg1Of duced p65-,Ser
R7234 T8847 T8845 arg2Of Ser,vely re
R7235 T8847 T8850 arg1Of Ser,o
R7236 T8849 T8847 arg2Of 5-Ser311 phosph,Ser
R7237 T8849 T8848 arg1Of 5-Ser311 phosph,276 and p6
R7238 T8851 T8850 arg2Of r,o
R7239 T8851 T8852 arg1Of r,y
R7240 T8851 T8853 arg1Of r,lati
R7241 T8853 T8854 arg1Of lati,o
R7242 T8853 T8855 arg1Of lati,"n (p < 0.05,"
R7243 T8856 T8850 arg3Of r,o
R7244 T8859 T8860 arg1Of iv,"ely),"
R7245 T8859 T8862 arg1Of iv,le it
R7246 T8862 T8858 arg2Of le it ,spect
R7247 T8862 T8860 arg2Of le it ,"ely),"
R7248 T8862 T8861 arg1Of le it ,whi
R7249 T8863 T8864 arg1Of could not ,af
R7250 T8865 T8864 arg2Of fect p65-S,af
R7251 T8866 T8862 arg2Of er529 or p65-Se,le it
R7252 T8866 T8863 arg1Of er529 or p65-Se,could not
R7253 T8866 T8865 arg1Of er529 or p65-Se,fect p65-S
R7254 T8866 T8867 arg1Of er529 or p65-Se,r
R7255 T8869 T8870 arg1Of s,pho
R7256 T8870 T8867 arg2Of pho,r
R7257 T8870 T8868 arg1Of pho,536 pho
R7258 T8871 T8870 arg2Of ry,pho
R7259 T8872 T8867 arg3Of l,r
R7260 T8874 T8873 arg2Of contrast,In
R7261 T8877 T8876 arg1Of phosphorylation,p65-Thr435
R7262 T8877 T8878 arg1Of phosphorylation,was
R7263 T8877 T8879 arg2Of phosphorylation,increased
R7264 T8879 T8873 arg1Of increased,In
R7265 T8879 T8875 arg1Of increased,","
R7266 T8879 T8878 arg2Of increased,was
R7267 T8879 T8880 arg1Of increased,in
R7268 T8879 T8883 arg1Of increased,(
R7269 T8879 T8887 arg1Of increased,within
R7270 T8882 T8880 arg2Of cells,in
R7271 T8882 T8881 arg1Of cells,endothelial
R7272 T8885 T8883 arg2Of astrocytes,(
R7273 T8885 T8884 arg1Of astrocytes,not
R7274 T8886 T8883 arg3Of ),(
R7275 T8889 T8887 arg2Of PC,within
R7276 T8889 T8888 arg1Of PC,the
R7277 T8889 T8890 arg1Of PC,of
R7278 T8889 T8895 arg1Of PC,after
R7279 T8892 T8890 arg2Of animals,of
R7280 T8892 T8891 arg1Of animals,saline-infused
R7281 T8894 T8893 arg1Of hr,12
R7282 T8895 T8894 arg1Of after,hr
R7283 T8896 T8895 arg2Of SE,after
R7284 T8896 T8897 arg1Of SE,(
R7285 T8899 T8897 arg2Of 5A,(
R7286 T8899 T8898 arg1Of 5A,Figure
R7287 T8900 T8897 arg3Of ),(
R7288 T8902 T8901 arg2Of addition,In
R7289 T8905 T8904 arg1Of infusion,sTNFp55R
R7290 T8905 T8907 arg1Of infusion,alleviated
R7291 T8907 T8901 arg1Of alleviated,In
R7292 T8907 T8903 arg1Of alleviated,","
R7293 T8907 T8906 arg1Of alleviated,effectively
R7294 T8907 T8914 arg1Of alleviated,","
R7295 T8907 T8915 arg1Of alleviated,compared
R7296 T8910 T8907 arg2Of phosphorylation,alleviated
R7297 T8910 T8908 arg1Of phosphorylation,SE-induced
R7298 T8910 T8909 arg1Of phosphorylation,p65-Thr435
R7299 T8910 T8911 arg1Of phosphorylation,in
R7300 T8913 T8911 arg2Of cells,in
R7301 T8913 T8912 arg1Of cells,endothelial
R7302 T8916 T8915 arg2Of to,compared
R7303 T8918 T8916 arg2Of infusion,to
R7304 T8918 T8917 arg1Of infusion,saline
R7305 T8918 T8919 arg1Of infusion,(
R7306 T8920 T8919 arg2Of p,(
R7307 T8920 T8921 arg1Of p,<
R7308 T8920 T8922 arg1Of p,0.05
R7309 T8920 T8923 arg1Of p,","
R7310 T8925 T8923 arg2Of 5B,","
R7311 T8925 T8924 arg1Of 5B,Figure
R7312 T8926 T8919 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T8741 578-581 Protein denotes p65
T8740 564-567 Protein denotes p65
T8739 485-488 Protein denotes p65
T8744 850-853 Protein denotes p65
T8743 799-806 Protein denotes TNFp55R
T8742 638-641 Protein denotes p65
T8738 470-473 Protein denotes p65
T8737 433-440 Protein denotes TNFp55R
T8736 366-369 Protein denotes p65
T8735 350-353 Protein denotes p65
T8734 338-341 Protein denotes p65
T8733 326-329 Protein denotes p65
T8732 106-111 Protein denotes TNF-α
T8731 28-33 Protein denotes TNF-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8949 850-853 http://www.uniprot.org/uniprot/P21579 denotes p65
T8948 638-641 http://www.uniprot.org/uniprot/P21579 denotes p65
T8947 578-581 http://www.uniprot.org/uniprot/P21579 denotes p65
T8946 564-567 http://www.uniprot.org/uniprot/P21579 denotes p65
T8945 485-488 http://www.uniprot.org/uniprot/P21579 denotes p65
T8944 470-473 http://www.uniprot.org/uniprot/P21579 denotes p65
T8943 366-369 http://www.uniprot.org/uniprot/P21579 denotes p65
T8937 578-581 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8936 564-567 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8935 485-488 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8934 470-473 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8933 366-369 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8932 350-353 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8931 338-341 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8930 326-329 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8929 106-111 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T8928 28-33 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T8927 28-31 http://www.uniprot.org/uniprot/P01375 denotes TNF
T8942 350-353 http://www.uniprot.org/uniprot/P21579 denotes p65
T8941 338-341 http://www.uniprot.org/uniprot/P21579 denotes p65
T8940 326-329 http://www.uniprot.org/uniprot/P21579 denotes p65
T8939 850-853 http://www.uniprot.org/uniprot/Q04206 denotes p65
T8938 638-641 http://www.uniprot.org/uniprot/Q04206 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T8752 121-130 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T8751 861-876 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8750 649-664 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8749 589-604 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8748 496-511 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8747 377-392 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8746 69-84 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-MF

Id Subject Object Predicate Lexical cue
T8753 212-222 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T8758 892-897 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T8757 694-699 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T8756 424-429 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T8755 212-222 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T8754 212-222 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies

sentences

Id Subject Object Predicate Lexical cue
T8690 785-949 Sentence denotes In addition, sTNFp55R infusion effectively alleviated SE-induced p65-Thr435 phosphorylation in endothelial cells, compared to saline infusion (p < 0.05, Figure 5B).
T8689 625-784 Sentence denotes In contrast, p65-Thr435 phosphorylation was increased in endothelial cells (not astrocytes) within the PC of saline-infused animals 12 hr after SE (Figure 5A).
T8688 224-624 Sentence denotes Compared to non-SE animals (data not shown), 12 hr-post SE animals of the saline-infused group showed p65-Ser276, p65-Ser311, p65-Ser529, and p65-Ser536 phosphorylation in astrocytes (not endothelial cells). sTNFp55R infusion effectively reduced p65-Ser276 and p65-Ser311 phosphorylation (p < 0.05, respectively), while it could not affect p65-Ser529 or p65-Ser536 phosphorylation (Figures 3 and 4A).
T8687 95-223 Sentence denotes To confirm TNF-α-mediated signaling following SE, we performed an immunohistochemical study using five phospho-NF-κB antibodies.
T8686 0-94 Sentence denotes It is well established that TNF-α is one of the major stimuli toward phosphorylation of NF-κB.
T167 0-94 Sentence denotes It is well established that TNF-α is one of the major stimuli toward phosphorylation of NF-κB.
T168 95-223 Sentence denotes To confirm TNF-α-mediated signaling following SE, we performed an immunohistochemical study using five phospho-NF-κB antibodies.
T169 224-624 Sentence denotes Compared to non-SE animals (data not shown), 12 hr-post SE animals of the saline-infused group showed p65-Ser276, p65-Ser311, p65-Ser529, and p65-Ser536 phosphorylation in astrocytes (not endothelial cells). sTNFp55R infusion effectively reduced p65-Ser276 and p65-Ser311 phosphorylation (p < 0.05, respectively), while it could not affect p65-Ser529 or p65-Ser536 phosphorylation (Figures 3 and 4A).
T170 625-784 Sentence denotes In contrast, p65-Thr435 phosphorylation was increased in endothelial cells (not astrocytes) within the PC of saline-infused animals 12 hr after SE (Figure 5A).
T171 785-949 Sentence denotes In addition, sTNFp55R infusion effectively alleviated SE-induced p65-Thr435 phosphorylation in endothelial cells, compared to saline infusion (p < 0.05, Figure 5B).

simple1

Id Subject Object Predicate Lexical cue
T8772 850-853 Protein denotes p65
T8771 799-806 Protein denotes TNFp55R
T8770 638-641 Protein denotes p65
T8769 578-581 Protein denotes p65
T8768 564-567 Protein denotes p65
T8767 485-488 Protein denotes p65
T8766 470-473 Protein denotes p65
T8765 433-440 Protein denotes TNFp55R
T8764 366-369 Protein denotes p65
T8763 350-353 Protein denotes p65
T8762 338-341 Protein denotes p65
T8761 326-329 Protein denotes p65
T8760 106-111 Protein denotes TNF-α
T8759 28-33 Protein denotes TNF-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T9290 861-876 Phosphorylation denotes phosphorylation
T9289 839-849 Positive_regulation denotes SE-induced
T9288 649-664 Phosphorylation denotes phosphorylation
T9287 669-678 Positive_regulation denotes increased
T9286 462-469 Negative_regulation denotes reduced
T9285 568-574 Negative_regulation denotes Ser529
T9284 496-511 Phosphorylation denotes phosphorylation
T9283 589-604 Phosphorylation denotes phosphorylation
T9282 557-563 Regulation denotes affect
T9281 377-392 Phosphorylation denotes phosphorylation
T9280 850-853 Protein denotes p65
T9279 799-806 Protein denotes TNFp55R
T9278 638-641 Protein denotes p65
T9277 485-488 Protein denotes p65
T9276 470-473 Protein denotes p65
T9275 433-440 Protein denotes TNFp55R
T9274 578-581 Protein denotes p65
T9273 564-567 Protein denotes p65
T9272 366-369 Protein denotes p65
T9271 350-353 Protein denotes p65
T9270 338-341 Protein denotes p65
T9269 326-329 Protein denotes p65
T9268 106-111 Protein denotes TNF-α
T9267 28-33 Protein denotes TNF-α
R7579 T9269 T9281 themeOf p65,phosphorylation
R7580 T9270 T9281 themeOf p65,phosphorylation
R7581 T9271 T9281 themeOf p65,phosphorylation
R7582 T9272 T9281 themeOf p65,phosphorylation
R7583 T9273 T9285 themeOf p65,Ser529
R7584 T9273 T9283 themeOf p65,phosphorylation
R7585 T9274 T9283 themeOf p65,phosphorylation
R7586 T9275 T9283 themeOf TNFp55R,phosphorylation
R7587 T9276 T9286 themeOf p65,reduced
R7588 T9277 T9284 themeOf p65,phosphorylation
R7589 T9278 T9288 themeOf p65,phosphorylation
R7590 T9280 T9290 themeOf p65,phosphorylation
R7591 T9283 T9282 themeOf phosphorylation,affect
R7592 T9283 T9282 themeOf phosphorylation,affect
R7593 T9283 T9282 themeOf phosphorylation,affect
R7594 T9284 T9286 themeOf phosphorylation,reduced
R7595 T9288 T9287 themeOf phosphorylation,increased
R7596 T9290 T9289 themeOf phosphorylation,SE-induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T9133 828-838 Negative_regulation denotes alleviated
T9132 861-876 Phosphorylation denotes phosphorylation
T9131 839-849 Positive_regulation denotes SE-induced
T9130 669-678 Positive_regulation denotes increased
T9129 649-664 Phosphorylation denotes phosphorylation
T9128 496-511 Phosphorylation denotes phosphorylation
T9127 557-563 Regulation denotes affect
T9126 589-604 Phosphorylation denotes phosphorylation
T9125 462-469 Negative_regulation denotes reduced
T9124 377-392 Phosphorylation denotes phosphorylation
T9123 850-853 Protein denotes p65
T9122 799-806 Protein denotes TNFp55R
T9121 638-641 Protein denotes p65
T9120 485-488 Protein denotes p65
T9119 470-473 Protein denotes p65
T9118 433-440 Protein denotes TNFp55R
T9117 578-581 Protein denotes p65
T9116 564-567 Protein denotes p65
T9115 366-369 Protein denotes p65
T9114 350-353 Protein denotes p65
T9113 338-341 Protein denotes p65
T9112 326-329 Protein denotes p65
T9111 106-111 Protein denotes TNF-α
T9110 28-33 Protein denotes TNF-α
R7473 T9112 T9124 themeOf p65,phosphorylation
R7474 T9113 T9124 themeOf p65,phosphorylation
R7475 T9114 T9124 themeOf p65,phosphorylation
R7476 T9115 T9124 themeOf p65,phosphorylation
R7477 T9116 T9126 themeOf p65,phosphorylation
R7478 T9117 T9126 themeOf p65,phosphorylation
R7479 T9118 T9125 causeOf TNFp55R,reduced
R7480 T9118 T9125 causeOf TNFp55R,reduced
R7481 T9119 T9125 themeOf p65,reduced
R7482 T9120 T9128 themeOf p65,phosphorylation
R7483 T9121 T9129 themeOf p65,phosphorylation
R7484 T9122 T9133 causeOf TNFp55R,alleviated
R7485 T9122 T9133 causeOf TNFp55R,alleviated
R7486 T9123 T9132 themeOf p65,phosphorylation
R7487 T9126 T9127 themeOf phosphorylation,affect
R7488 T9126 T9127 themeOf phosphorylation,affect
R7489 T9128 T9125 themeOf phosphorylation,reduced
R7490 T9129 T9130 themeOf phosphorylation,increased
R7491 T9131 T9133 themeOf SE-induced,alleviated
R7492 T9132 T9133 themeOf phosphorylation,alleviated
R7493 T9132 T9131 themeOf phosphorylation,SE-induced

DLUT931

Id Subject Object Predicate Lexical cue
T9184 828-838 Negative_regulation denotes alleviated
T9183 839-849 Positive_regulation denotes SE-induced
T9182 861-876 Phosphorylation denotes phosphorylation
T9181 669-678 Positive_regulation denotes increased
T9180 649-664 Phosphorylation denotes phosphorylation
T9179 557-563 Regulation denotes affect
T9178 462-469 Negative_regulation denotes reduced
T9177 589-604 Phosphorylation denotes phosphorylation
T9176 568-574 Binding denotes Ser529
T9175 496-511 Phosphorylation denotes phosphorylation
T9174 69-84 Phosphorylation denotes phosphorylation
T9173 850-853 Protein denotes p65
T9172 799-806 Protein denotes TNFp55R
T9171 638-641 Protein denotes p65
T9170 485-488 Protein denotes p65
T9169 470-473 Protein denotes p65
T9168 433-440 Protein denotes TNFp55R
T9167 578-581 Protein denotes p65
T9166 564-567 Protein denotes p65
T9165 366-369 Protein denotes p65
T9164 350-353 Protein denotes p65
T9163 338-341 Protein denotes p65
T9162 326-329 Protein denotes p65
T9161 106-111 Protein denotes TNF-α
T9160 28-33 Protein denotes TNF-α
R7512 T9170 T9175 themeOf p65,phosphorylation
R7513 T9171 T9180 themeOf p65,phosphorylation
R7514 T9173 T9182 themeOf p65,phosphorylation
R7516 T9175 T9178 themeOf phosphorylation,reduced
R7518 T9180 T9181 themeOf phosphorylation,increased
R7519 T9182 T9183 themeOf phosphorylation,SE-induced
R7520 T9183 T9184 themeOf SE-induced,alleviated
R7508 T9160 T9174 themeOf TNF-α,phosphorylation
R7509 T9166 T9176 themeOf p65,Ser529
R7510 T9167 T9177 themeOf p65,phosphorylation
R7511 T9169 T9175 themeOf p65,phosphorylation
R7515 T9175 T9178 themeOf phosphorylation,reduced
R7517 T9177 T9179 themeOf phosphorylation,affect

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T9341 578-604 Phosphorylation denotes p65-Ser536 phosphorylation
T9340 366-392 Phosphorylation denotes p65-Ser536 phosphorylation
T9339 69-93 Phosphorylation denotes phosphorylation of NF-κB
T9338 485-511 Phosphorylation denotes p65-Ser311 phosphorylation
T9337 638-664 Phosphorylation denotes p65-Thr435 phosphorylation
T9336 625-699 Positive_regulation denotes In contrast, p65-Thr435 phosphorylation was increased in endothelial cells
T9335 193-222 Entity denotes five phospho-NF-κB antibodies
T9334 432-449 Entity denotes sTNFp55R infusion
T9333 294-304 Entity denotes the saline
T9332 564-574 Protein denotes p65-Ser529
T9331 85-93 Protein denotes of NF-κB
T9330 412-429 Entity denotes endothelial cells
T9329 799-802 Protein denotes TNF
T9328 908-917 Entity denotes to saline
T9327 366-376 Protein denotes p65-Ser536
T9326 513-514 Entity denotes p
T9325 396-406 Entity denotes astrocytes
T9324 705-715 Entity denotes astrocytes
T9323 578-588 Entity denotes p65-Ser536
T9322 280-282 Protein denotes SE
T9321 638-648 Entity denotes p65-Thr435
T9320 350-360 Entity denotes p65-Ser529
T9319 880-898 Entity denotes endothelial cells,
T9318 839-860 Entity denotes SE-induced p65-Thr435
T9317 769-783 Protein denotes SE (Figure 5A)
T9316 799-815 Entity denotes TNFp55R infusion
T9315 338-348 Protein denotes p65-Ser311
T9314 366-376 Entity denotes p65-Ser536
T9313 578-588 Protein denotes p65-Ser536
T9312 106-120 Protein denotes TNF-α-mediated
T9311 564-574 Entity denotes p65-Ser529
T9310 928-929 Entity denotes p
T9309 470-480 Entity denotes p65-Ser276
T9308 338-348 Entity denotes p65-Ser311
T9307 485-495 Protein denotes p65-Ser311
T9305 106-144 Entity denotes TNF-α-mediated signaling following SE,
T9304 918-926 Entity denotes infusion
T9303 28-33 Protein denotes TNF-α
T9302 433-436 Protein denotes TNF
T9301 326-336 Entity denotes p65-Ser276
T9300 206-211 Protein denotes NF-κB
T9299 470-480 Protein denotes p65-Ser276
T9298 638-648 Protein denotes p65-Thr435
T9297 724-756 Protein denotes the PC of saline-infused animals
T9296 485-495 Entity denotes p65-Ser311
T9295 350-360 Protein denotes p65-Ser529
T9294 839-849 Entity denotes SE-induced
T9293 682-699 Entity denotes endothelial cells
T9292 326-336 Protein denotes p65-Ser276
T9291 839-860 Protein denotes SE-induced p65-Thr435
R7597 T9296 T9307 partOf p65-Ser311,p65-Ser311
R7598 T9296 T9338 siteOf p65-Ser311,p65-Ser311 phosphorylation
R7599 T9298 T9337 themeOf p65-Thr435,p65-Thr435 phosphorylation
R7601 T9307 T9338 themeOf p65-Ser311,p65-Ser311 phosphorylation
R7602 T9313 T9341 themeOf p65-Ser536,p65-Ser536 phosphorylation
R7603 T9314 T9327 partOf p65-Ser536,p65-Ser536
R7604 T9314 T9340 siteOf p65-Ser536,p65-Ser536 phosphorylation
R7605 T9321 T9298 partOf p65-Thr435,p65-Thr435
R7606 T9321 T9337 siteOf p65-Thr435,p65-Thr435 phosphorylation
R7607 T9323 T9313 partOf p65-Ser536,p65-Ser536
R7608 T9323 T9341 siteOf p65-Ser536,p65-Ser536 phosphorylation
R7609 T9327 T9340 themeOf p65-Ser536,p65-Ser536 phosphorylation
R7610 T9331 T9339 themeOf of NF-κB,phosphorylation of NF-κB
R7611 T9337 T9336 themeOf p65-Thr435 phosphorylation,"In contrast, p65-Thr435 phosphorylation was increased in endothelial cells"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T9049 614-615 CD denotes 3
T9048 606-613 NNS denotes Figures
T9047 605-606 -LRB- denotes (
T9046 589-604 NN denotes phosphorylation
T9045 578-588 NN denotes p65-Ser536
T9044 575-577 CC denotes or
T9043 564-574 NN denotes p65-Ser529
T9042 557-563 VB denotes affect
T9041 553-556 RB denotes not
T9040 547-552 MD denotes could
T9039 544-546 PRP denotes it
T9038 538-543 IN denotes while
T9037 536-537 , denotes ,
T9036 535-536 -RRB- denotes )
T9035 523-535 RB denotes respectively
T9034 521-522 , denotes ,
T9033 517-521 CD denotes 0.05
T9032 515-516 FW denotes <
T9031 513-514 FW denotes p
T9030 512-513 -LRB- denotes (
T9029 496-511 NN denotes phosphorylation
T9028 485-495 NNP denotes p65-Ser311
T9027 481-484 CC denotes and
T9026 470-480 NNP denotes p65-Ser276
T9025 462-469 VBD denotes reduced
T9024 450-461 RB denotes effectively
T9023 441-449 NN denotes infusion
T9022 432-440 JJ denotes sTNFp55R
T9021 430-431 . denotes .
T9020 429-430 -RRB- denotes )
T9019 424-429 NNS denotes cells
T9018 412-423 JJ denotes endothelial
T9017 408-411 RB denotes not
T9016 407-408 -LRB- denotes (
T9015 396-406 NNS denotes astrocytes
T9014 393-395 IN denotes in
T9013 377-392 NN denotes phosphorylation
T9012 366-376 NNP denotes p65-Ser536
T9011 362-365 CC denotes and
T9010 360-361 , denotes ,
T9009 350-360 NNP denotes p65-Ser529
T9008 348-349 , denotes ,
T9007 338-348 NNP denotes p65-Ser311
T9006 336-337 , denotes ,
T9005 326-336 NNP denotes p65-Ser276
T9004 319-325 VBD denotes showed
T9003 313-318 NN denotes group
T9002 298-312 JJ denotes saline-infused
T9001 294-297 DT denotes the
T9000 291-293 IN denotes of
T8999 283-290 NNS denotes animals
T8998 280-282 NNP denotes SE
T8997 272-279 JJ denotes hr-post
T8996 269-271 CD denotes 12
T8995 267-268 , denotes ,
T8994 266-267 -RRB- denotes )
T8993 261-266 VBN denotes shown
T8992 257-260 RB denotes not
T8991 252-256 NNS denotes data
T8990 251-252 -LRB- denotes (
T8989 243-250 NNS denotes animals
T8988 236-242 JJ denotes non-SE
T8987 233-235 TO denotes to
T8986 224-232 VBN denotes Compared
T8985 222-223 . denotes .
T8984 212-222 NNS denotes antibodies
T8983 198-211 JJ denotes phospho-NF-κB
T8982 193-197 CD denotes five
T8981 187-192 VBG denotes using
T8980 181-186 NN denotes study
T8979 161-180 JJ denotes immunohistochemical
T8978 158-160 DT denotes an
T8977 148-157 VBD denotes performed
T8976 145-147 PRP denotes we
T8975 143-144 , denotes ,
T8974 141-143 NNP denotes SE
T8973 131-140 VBG denotes following
T8972 121-130 VBG denotes signaling
T8971 106-120 JJ denotes TNF-α-mediated
T8970 98-105 VB denotes confirm
T8969 95-97 TO denotes To
T8968 93-94 . denotes .
T8967 88-93 NN denotes NF-κB
T8966 85-87 IN denotes of
T8965 69-84 NN denotes phosphorylation
T8964 62-68 IN denotes toward
T8963 54-61 NNS denotes stimuli
T8962 48-53 JJ denotes major
T8961 44-47 DT denotes the
T8960 41-43 IN denotes of
T8959 37-40 CD denotes one
T8958 34-36 VBZ denotes is
T8957 28-33 NNP denotes TNF-α
T8956 23-27 IN denotes that
T8955 11-22 VBN denotes established
T8954 6-10 RB denotes well
T8953 3-5 VBZ denotes is
T8952 0-2 PRP denotes It
T9109 948-949 . denotes .
T9108 947-948 -RRB- denotes )
T9107 945-947 NN denotes 5B
T9106 938-944 NN denotes Figure
T9105 936-937 , denotes ,
T9104 932-936 CD denotes 0.05
T9103 930-931 FW denotes <
T9102 928-929 FW denotes p
T9101 927-928 -LRB- denotes (
T9100 918-926 NN denotes infusion
T9099 911-917 VB denotes saline
T9098 908-910 TO denotes to
T9097 899-907 VBN denotes compared
T9096 897-898 , denotes ,
T9095 892-897 NNS denotes cells
T9094 880-891 JJ denotes endothelial
T9093 877-879 IN denotes in
T9092 861-876 NN denotes phosphorylation
T9091 850-860 NN denotes p65-Thr435
T9090 839-849 JJ denotes SE-induced
T9089 828-838 VBD denotes alleviated
T9088 816-827 RB denotes effectively
T9087 807-815 NN denotes infusion
T9086 798-806 JJ denotes sTNFp55R
T9085 796-797 , denotes ,
T9084 788-796 NN denotes addition
T9083 785-787 IN denotes In
T9082 783-784 . denotes .
T9081 782-783 -RRB- denotes )
T9080 780-782 NNP denotes 5A
T9079 773-779 NNP denotes Figure
T9078 772-773 -LRB- denotes (
T9077 769-771 NNP denotes SE
T9076 763-768 IN denotes after
T9075 760-762 NN denotes hr
T9074 757-759 CD denotes 12
T9073 749-756 NNS denotes animals
T9072 734-748 JJ denotes saline-infused
T9071 731-733 IN denotes of
T9070 728-730 NN denotes PC
T9069 724-727 DT denotes the
T9068 717-723 IN denotes within
T9067 715-716 -RRB- denotes )
T9066 705-715 NNS denotes astrocytes
T9065 701-704 RB denotes not
T9064 700-701 -LRB- denotes (
T9063 694-699 NNS denotes cells
T9062 682-693 JJ denotes endothelial
T9061 679-681 IN denotes in
T9060 669-678 VBN denotes increased
T9059 665-668 VBD denotes was
T9058 649-664 NN denotes phosphorylation
T9057 638-648 NN denotes p65-Thr435
T9056 636-637 , denotes ,
T9055 628-636 NN denotes contrast
T9054 625-627 IN denotes In
T9053 623-624 . denotes .
T9052 622-623 -RRB- denotes )
T9051 620-622 CD denotes 4A
T9050 616-619 CC denotes and
R7342 T8979 T8980 amod immunohistochemical,study
R7343 T8980 T8977 dobj study,performed
R7344 T8981 T8977 advcl using,performed
R7345 T8982 T8984 nummod five,antibodies
R7346 T8983 T8984 amod phospho-NF-κB,antibodies
R7347 T8984 T8981 dobj antibodies,using
R7348 T8985 T8977 punct .,performed
R7349 T8986 T8986 ROOT Compared,Compared
R7350 T8987 T8986 prep to,Compared
R7351 T8988 T8989 amod non-SE,animals
R7352 T8989 T8987 pobj animals,to
R7353 T8990 T8999 punct (,animals
R7354 T8991 T8999 nmod data,animals
R7355 T8992 T8993 neg not,shown
R7356 T8993 T8991 acl shown,data
R7357 T8994 T8993 punct ),shown
R7358 T8995 T8991 punct ",",data
R7359 T8996 T8999 nummod 12,animals
R7360 T8997 T8999 amod hr-post,animals
R7361 T8998 T8999 compound SE,animals
R7362 T8999 T8989 appos animals,animals
R7363 T9000 T8999 prep of,animals
R7364 T9001 T9003 det the,group
R7365 T9002 T9003 amod saline-infused,group
R7366 T9003 T9000 pobj group,of
R7367 T9004 T8986 auxpass showed,Compared
R7368 T9005 T9013 nsubj p65-Ser276,phosphorylation
R7369 T9006 T9005 punct ",",p65-Ser276
R7370 T9007 T9005 conj p65-Ser311,p65-Ser276
R7371 T9008 T9007 punct ",",p65-Ser311
R7372 T9009 T9007 conj p65-Ser529,p65-Ser311
R7373 T9010 T9009 punct ",",p65-Ser529
R7374 T9011 T9009 cc and,p65-Ser529
R7375 T9012 T9013 compound p65-Ser536,phosphorylation
R7376 T9013 T9004 dobj phosphorylation,showed
R7377 T9014 T9013 prep in,phosphorylation
R7378 T9015 T9014 pobj astrocytes,in
R7379 T9016 T9019 punct (,cells
R7380 T9017 T9018 neg not,endothelial
R7381 T9018 T9019 amod endothelial,cells
R7382 T9019 T9015 appos cells,astrocytes
R7383 T9020 T9015 punct ),astrocytes
R7384 T9021 T8986 punct .,Compared
R7385 T9022 T9023 amod sTNFp55R,infusion
R7386 T9023 T9025 nsubj infusion,reduced
R7387 T9024 T9025 advmod effectively,reduced
R7388 T9025 T9025 ROOT reduced,reduced
R7389 T9026 T9025 dobj p65-Ser276,reduced
R7390 T9027 T9026 cc and,p65-Ser276
R7391 T9028 T9026 conj p65-Ser311,p65-Ser276
R7392 T9029 T9026 conj phosphorylation,p65-Ser276
R7393 T9030 T9033 punct (,0.05
R7394 T9031 T9032 nmod p,<
R7395 T9032 T9033 compound <,0.05
R7396 T9033 T9029 appos 0.05,phosphorylation
R7397 T9034 T9033 punct ",",0.05
R7398 T9035 T9033 advmod respectively,0.05
R7399 T9036 T9029 punct ),phosphorylation
R7400 T9037 T9025 punct ",",reduced
R7401 T9038 T9042 mark while,affect
R7402 T9039 T9042 nsubj it,affect
R7403 T9040 T9042 aux could,affect
R7404 T9041 T9042 neg not,affect
R7405 T9042 T9025 advcl affect,reduced
R7406 T9043 T9048 nmod p65-Ser529,Figures
R7407 T9044 T9043 cc or,p65-Ser529
R7408 T9045 T9046 compound p65-Ser536,phosphorylation
R7409 T9046 T9043 conj phosphorylation,p65-Ser529
R7410 T9047 T9048 punct (,Figures
R7411 T9048 T9042 dobj Figures,affect
R7412 T9049 T9048 nummod 3,Figures
R7413 T9050 T9049 cc and,3
R7414 T9051 T9049 conj 4A,3
R7415 T9052 T9048 punct ),Figures
R7416 T9053 T9025 punct .,reduced
R7417 T9054 T9060 prep In,increased
R7418 T9055 T9054 pobj contrast,In
R7419 T9056 T9060 punct ",",increased
R7420 T9057 T9058 compound p65-Thr435,phosphorylation
R7421 T9058 T9060 nsubjpass phosphorylation,increased
R7422 T9059 T9060 auxpass was,increased
R7423 T9060 T9060 ROOT increased,increased
R7424 T9061 T9060 prep in,increased
R7425 T9062 T9063 amod endothelial,cells
R7426 T9063 T9061 pobj cells,in
R7427 T9064 T9066 punct (,astrocytes
R7428 T9065 T9066 neg not,astrocytes
R7429 T9066 T9060 parataxis astrocytes,increased
R7430 T9067 T9066 punct ),astrocytes
R7431 T9068 T9066 prep within,astrocytes
R7432 T9069 T9070 det the,PC
R7433 T9070 T9068 pobj PC,within
R7434 T9071 T9070 prep of,PC
R7435 T9072 T9073 amod saline-infused,animals
R7436 T9073 T9071 pobj animals,of
R7437 T9074 T9075 nummod 12,hr
R7438 T9075 T9060 npadvmod hr,increased
R7439 T9076 T9075 prep after,hr
R7440 T9077 T9076 pobj SE,after
R7441 T9078 T9080 punct (,5A
R7442 T9079 T9080 compound Figure,5A
R7443 T9080 T9077 appos 5A,SE
R7444 T9081 T9080 punct ),5A
R7445 T9082 T9060 punct .,increased
R7446 T9083 T9089 prep In,alleviated
R7447 T9084 T9083 pobj addition,In
R7448 T9085 T9089 punct ",",alleviated
R7449 T9086 T9087 amod sTNFp55R,infusion
R7450 T9087 T9089 nsubj infusion,alleviated
R7451 T9088 T9089 advmod effectively,alleviated
R7452 T9089 T9089 ROOT alleviated,alleviated
R7453 T9090 T9092 amod SE-induced,phosphorylation
R7454 T9091 T9092 compound p65-Thr435,phosphorylation
R7455 T9092 T9089 dobj phosphorylation,alleviated
R7456 T9093 T9092 prep in,phosphorylation
R7457 T9094 T9095 amod endothelial,cells
R7458 T9095 T9093 pobj cells,in
R7459 T9096 T9089 punct ",",alleviated
R7460 T9097 T9089 prep compared,alleviated
R7461 T9098 T9097 prep to,compared
R7462 T9099 T9100 amod saline,infusion
R7463 T9100 T9098 pobj infusion,to
R7464 T9101 T9100 punct (,infusion
R7465 T9102 T9104 compound p,0.05
R7466 T9103 T9104 compound <,0.05
R7467 T9104 T9100 appos 0.05,infusion
R7468 T9105 T9104 punct ",",0.05
R7469 T9106 T9107 compound Figure,5B
R7470 T9107 T9104 appos 5B,0.05
R7471 T9108 T9100 punct ),infusion
R7472 T9109 T9089 punct .,alleviated
R7315 T8952 T8955 nsubjpass It,established
R7316 T8953 T8955 auxpass is,established
R7317 T8954 T8955 advmod well,established
R7318 T8955 T8955 ROOT established,established
R7319 T8956 T8958 mark that,is
R7320 T8957 T8958 nsubj TNF-α,is
R7321 T8958 T8955 ccomp is,established
R7322 T8959 T8958 attr one,is
R7323 T8960 T8959 prep of,one
R7324 T8961 T8963 det the,stimuli
R7325 T8962 T8963 amod major,stimuli
R7326 T8963 T8960 pobj stimuli,of
R7327 T8964 T8963 prep toward,stimuli
R7328 T8965 T8964 pobj phosphorylation,toward
R7329 T8966 T8965 prep of,phosphorylation
R7330 T8967 T8966 pobj NF-κB,of
R7331 T8968 T8955 punct .,established
R7332 T8969 T8970 aux To,confirm
R7333 T8970 T8977 advcl confirm,performed
R7334 T8971 T8972 advmod TNF-α-mediated,signaling
R7335 T8972 T8970 dobj signaling,confirm
R7336 T8973 T8972 prep following,signaling
R7337 T8974 T8973 pobj SE,following
R7338 T8975 T8977 punct ",",performed
R7339 T8976 T8977 nsubj we,performed
R7340 T8977 T8977 ROOT performed,performed
R7341 T8978 T8980 det an,study

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T9225 839-849 Positive_regulation denotes SE-induced
T9224 839-849 Positive_regulation denotes SE-induced
T9223 828-838 Positive_regulation denotes alleviated
T9222 828-838 Positive_regulation denotes alleviated
T9221 861-876 Phosphorylation denotes phosphorylation
T9220 861-876 Phosphorylation denotes phosphorylation
T9219 854-860 Protein denotes Thr435
T9218 850-853 Protein denotes p65
T9217 798-806 Protein denotes sTNFp55R
T9216 669-678 Positive_regulation denotes increased
T9215 669-678 Positive_regulation denotes increased
T9214 649-664 Phosphorylation denotes phosphorylation
T9213 649-664 Phosphorylation denotes phosphorylation
T9212 642-648 Protein denotes Thr435
T9211 638-641 Protein denotes p65
T9210 462-469 Negative_regulation denotes reduced
T9209 462-469 Negative_regulation denotes reduced
T9208 462-469 Negative_regulation denotes reduced
T9207 462-469 Negative_regulation denotes reduced
T9206 496-511 Phosphorylation denotes phosphorylation
T9205 496-511 Phosphorylation denotes phosphorylation
T9204 496-511 Phosphorylation denotes phosphorylation
T9203 496-511 Phosphorylation denotes phosphorylation
T9202 515-516 Entity denotes <
T9201 489-495 Protein denotes Ser311
T9200 485-488 Protein denotes p65
T9199 474-480 Protein denotes Ser276
T9198 470-473 Protein denotes p65
T9197 432-440 Protein denotes sTNFp55R
T9196 377-392 Phosphorylation denotes phosphorylation
T9195 377-392 Phosphorylation denotes phosphorylation
T9194 370-376 Protein denotes Ser536
T9193 366-369 Protein denotes p65
T9192 198-222 Protein denotes phospho-NF-κB antibodies
T9191 106-111 Protein denotes TNF-α
T9190 69-84 Phosphorylation denotes phosphorylation
T9189 69-84 Phosphorylation denotes phosphorylation
T9188 88-93 Protein denotes NF-κB
T9187 28-33 Protein denotes TNF-α
R7522 T9187 T9189 themeOf TNF-α,phosphorylation
R7523 T9188 T9190 themeOf NF-κB,phosphorylation
R7524 T9193 T9195 themeOf p65,phosphorylation
R7525 T9194 T9196 themeOf Ser536,phosphorylation
R7526 T9198 T9203 themeOf p65,phosphorylation
R7527 T9199 T9204 themeOf Ser276,phosphorylation
R7528 T9200 T9205 themeOf p65,phosphorylation
R7529 T9201 T9206 themeOf Ser311,phosphorylation
R7530 T9202 T9200 SiteParent <,p65
R7531 T9202 T9201 SiteParent <,Ser311
R7532 T9203 T9202 Site phosphorylation,<
R7533 T9203 T9207 themeOf phosphorylation,reduced
R7534 T9204 T9202 Site phosphorylation,<
R7535 T9204 T9208 themeOf phosphorylation,reduced
R7536 T9205 T9202 Site phosphorylation,<
R7537 T9205 T9209 themeOf phosphorylation,reduced
R7538 T9206 T9202 Site phosphorylation,<
R7539 T9206 T9210 themeOf phosphorylation,reduced
R7540 T9211 T9213 themeOf p65,phosphorylation
R7541 T9212 T9214 themeOf Thr435,phosphorylation
R7542 T9213 T9215 themeOf phosphorylation,increased
R7543 T9214 T9216 themeOf phosphorylation,increased
R7544 T9218 T9220 themeOf p65,phosphorylation
R7545 T9219 T9221 themeOf Thr435,phosphorylation
R7546 T9220 T9222 themeOf phosphorylation,alleviated
R7547 T9220 T9224 themeOf phosphorylation,SE-induced
R7548 T9221 T9223 themeOf phosphorylation,alleviated
R7549 T9221 T9225 themeOf phosphorylation,SE-induced

testone

Id Subject Object Predicate Lexical cue
T8642 861-876 Phosphorylation denotes phosphorylation
T8641 842-849 Positive_regulation denotes induced
T8640 828-838 Negative_regulation denotes alleviated
T8639 669-678 Positive_regulation denotes increased
T8638 649-664 Phosphorylation denotes phosphorylation
T8637 589-604 Phosphorylation denotes phosphorylation
T8636 582-588 Entity denotes Ser536
T8635 557-563 Regulation denotes affect
T8634 496-511 Phosphorylation denotes phosphorylation
T8633 489-495 Entity denotes Ser311
T8632 474-480 Entity denotes Ser276
T8631 462-469 Negative_regulation denotes reduced
T8630 377-392 Phosphorylation denotes phosphorylation
T8629 370-376 Entity denotes Ser536
T8628 330-336 Entity denotes Ser276
T8627 69-84 Phosphorylation denotes phosphorylation
T8625 850-853 Protein denotes p65
T8624 799-806 Protein denotes TNFp55R
T8623 638-641 Protein denotes p65
T8622 578-581 Protein denotes p65
T8621 564-567 Protein denotes p65
T8620 485-488 Protein denotes p65
T8619 470-473 Protein denotes p65
T8618 433-440 Protein denotes TNFp55R
T8617 366-369 Protein denotes p65
T8616 350-353 Protein denotes p65
T8615 338-341 Protein denotes p65
T8614 326-329 Protein denotes p65
T8613 106-111 Protein denotes TNF-α
T8612 28-33 Protein denotes TNF-α
R7074 T8612 T8627 themeOf TNF-α,phosphorylation
R7075 T8614 T8630 themeOf p65,phosphorylation
R7076 T8615 T8630 themeOf p65,phosphorylation
R7077 T8616 T8630 themeOf p65,phosphorylation
R7078 T8617 T8630 themeOf p65,phosphorylation
R7079 T8619 T8634 themeOf p65,phosphorylation
R7080 T8620 T8634 themeOf p65,phosphorylation
R7081 T8621 T8637 themeOf p65,phosphorylation
R7082 T8622 T8637 themeOf p65,phosphorylation
R7083 T8623 T8638 themeOf p65,phosphorylation
R7084 T8625 T8642 themeOf p65,phosphorylation
R7085 T8628 T8630 themeOf Ser276,phosphorylation
R7086 T8628 T8614 partOf Ser276,p65
R7087 T8629 T8614 partOf Ser536,p65
R7088 T8629 T8615 partOf Ser536,p65
R7089 T8629 T8630 themeOf Ser536,phosphorylation
R7090 T8629 T8617 partOf Ser536,p65
R7091 T8629 T8616 partOf Ser536,p65
R7092 T8632 T8634 themeOf Ser276,phosphorylation
R7093 T8632 T8619 partOf Ser276,p65
R7094 T8633 T8634 themeOf Ser311,phosphorylation
R7095 T8633 T8620 partOf Ser311,p65
R7096 T8633 T8619 partOf Ser311,p65
R7097 T8634 T8631 themeOf phosphorylation,reduced
R7098 T8636 T8622 partOf Ser536,p65
R7099 T8636 T8621 partOf Ser536,p65
R7100 T8636 T8637 themeOf Ser536,phosphorylation
R7101 T8637 T8635 themeOf phosphorylation,affect
R7102 T8638 T8639 themeOf phosphorylation,increased
R7103 T8641 T8640 themeOf induced,alleviated
R7104 T8642 T8641 themeOf phosphorylation,induced

test3

Id Subject Object Predicate Lexical cue
T8675 582-588 Entity denotes Ser536
T8674 578-581 Protein denotes p65
T8673 564-567 Protein denotes p65
T8672 557-563 Regulation denotes affect
T8671 496-511 Phosphorylation denotes phosphorylation
T8670 485-488 Protein denotes p65
T8669 474-480 Entity denotes Ser276
T8668 470-473 Protein denotes p65
T8667 462-469 Negative_regulation denotes reduced
T8666 432-440 Protein denotes sTNFp55R
T8665 377-392 Phosphorylation denotes phosphorylation
T8664 370-376 Entity denotes Ser536
T8663 366-369 Protein denotes p65
T8662 350-353 Protein denotes p65
T8661 338-341 Protein denotes p65
T8660 326-329 Protein denotes p65
T8659 106-111 Protein denotes TNF-α
T8658 28-33 Protein denotes TNF-α
T8656 850-853 Protein denotes p65
T8655 799-806 Protein denotes TNFp55R
T8654 638-641 Protein denotes p65
T8653 578-581 Protein denotes p65
T8652 564-567 Protein denotes p65
T8651 485-488 Protein denotes p65
T8650 470-473 Protein denotes p65
T8649 433-440 Protein denotes TNFp55R
T8648 366-369 Protein denotes p65
T8647 350-353 Protein denotes p65
T8646 338-341 Protein denotes p65
T8645 326-329 Protein denotes p65
T8644 106-111 Protein denotes TNF-α
T8643 28-33 Protein denotes TNF-α
T8684 861-876 Phosphorylation denotes phosphorylation
T8683 850-853 Protein denotes p65
T8682 842-849 Positive_regulation denotes induced
T8681 828-838 Negative_regulation denotes alleviated
T8680 798-806 Protein denotes sTNFp55R
T8679 669-678 Positive_regulation denotes increased
T8678 649-664 Phosphorylation denotes phosphorylation
T8677 638-641 Protein denotes p65
T8676 589-604 Phosphorylation denotes phosphorylation
R7105 T8660 T8665 themeOf p65,phosphorylation
R7106 T8661 T8665 themeOf p65,phosphorylation
R7107 T8662 T8665 themeOf p65,phosphorylation
R7108 T8663 T8665 themeOf p65,phosphorylation
R7109 T8664 T8660 partOf Ser536,p65
R7110 T8664 T8663 partOf Ser536,p65
R7111 T8664 T8665 themeOf Ser536,phosphorylation
R7112 T8666 T8667 causeOf sTNFp55R,reduced
R7113 T8668 T8671 themeOf p65,phosphorylation
R7114 T8669 T8671 themeOf Ser276,phosphorylation
R7115 T8669 T8668 partOf Ser276,p65
R7116 T8670 T8671 themeOf p65,phosphorylation
R7117 T8671 T8667 themeOf phosphorylation,reduced
R7118 T8673 T8676 themeOf p65,phosphorylation
R7119 T8674 T8676 themeOf p65,phosphorylation
R7120 T8675 T8674 partOf Ser536,p65
R7121 T8675 T8676 themeOf Ser536,phosphorylation
R7122 T8676 T8672 themeOf phosphorylation,affect
R7123 T8677 T8678 themeOf p65,phosphorylation
R7124 T8678 T8679 themeOf phosphorylation,increased
R7125 T8680 T8681 causeOf sTNFp55R,alleviated
R7126 T8682 T8681 themeOf induced,alleviated
R7127 T8683 T8684 themeOf p65,phosphorylation
R7128 T8684 T8682 themeOf phosphorylation,induced