PMC:3312845 / 1223-1474
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T414 | 236-244 | NN | denotes | sTNFp55R |
T413 | 234-235 | -COMMA- | denotes | , |
T412 | 223-234 | RB | denotes | Furthermore |
T411 | 216-221 | NN | denotes | cells |
T410 | 204-215 | JJ | denotes | endothelial |
T409 | 201-203 | IN | denotes | in |
T408 | 185-200 | NN | denotes | phosphorylation |
T407 | 174-184 | NN | denotes | p65-Thr435 |
T406 | 171-173 | IN | denotes | of |
T405 | 160-170 | NN | denotes | inhibition |
T404 | 156-159 | IN | denotes | via |
T403 | 148-155 | NN | denotes | damages |
T402 | 139-147 | JJ | denotes | neuronal |
T401 | 135-138 | CC | denotes | and |
T400 | 129-134 | NN | denotes | edema |
T399 | 119-128 | JJ | denotes | vasogenic |
T398 | 108-118 | JJ | denotes | SE-induced |
T397 | 97-107 | VB | denotes | attenuated |
T396 | 88-96 | NN | denotes | infusion |
T395 | 86-87 | -RRB- | denotes | ) |
T394 | 78-86 | NN | denotes | sTNFp55R |
T393 | 77-78 | -LRB- | denotes | ( |
T392 | 68-76 | NN | denotes | receptor |
T391 | 64-67 | NN | denotes | p55 |
T390 | 60-63 | NN | denotes | TNF |
T389 | 52-59 | JJ | denotes | soluble |
T388 | 49-51 | IN | denotes | by |
T387 | 43-48 | NN | denotes | TNF-α |
T386 | 40-42 | IN | denotes | of |
T385 | 25-39 | NN | denotes | Neutralization |
T384 | 22-23 | -RRB- | denotes | ) |
T383 | 15-22 | NN | denotes | antigen |
T382 | 7-14 | NN | denotes | barrier |
R213 | T383 | T382 | arg1Of | antigen,barrier |
R215 | T385 | T386 | arg1Of | Neutralization,of |
R216 | T385 | T388 | arg1Of | Neutralization,by |
R217 | T385 | T397 | arg1Of | Neutralization,attenuated |
R218 | T387 | T386 | arg2Of | TNF-α,of |
R219 | T392 | T389 | arg1Of | receptor,soluble |
R220 | T392 | T390 | arg1Of | receptor,TNF |
R221 | T392 | T391 | arg1Of | receptor,p55 |
R222 | T392 | T393 | arg1Of | receptor,( |
R223 | T394 | T393 | arg2Of | sTNFp55R,( |
R224 | T395 | T393 | arg3Of | ),( |
R225 | T396 | T388 | arg2Of | infusion,by |
R226 | T396 | T392 | arg1Of | infusion,receptor |
R227 | T397 | T404 | arg1Of | attenuated,via |
R228 | T399 | T400 | arg1Of | vasogenic,edema |
R229 | T399 | T401 | arg1Of | vasogenic,and |
R230 | T402 | T401 | arg2Of | neuronal,and |
R231 | T403 | T397 | arg2Of | damages,attenuated |
R232 | T403 | T398 | arg1Of | damages,SE-induced |
R233 | T403 | T399 | arg1Of | damages,vasogenic |
R234 | T403 | T402 | arg1Of | damages,neuronal |
R235 | T405 | T404 | arg2Of | inhibition,via |
R236 | T405 | T406 | arg1Of | inhibition,of |
R237 | T408 | T406 | arg2Of | phosphorylation,of |
R238 | T408 | T407 | arg1Of | phosphorylation,p65-Thr435 |
R239 | T408 | T409 | arg1Of | phosphorylation,in |
R240 | T411 | T409 | arg2Of | cells,in |
R241 | T411 | T410 | arg1Of | cells,endothelial |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T154 | 43-48 | Protein | denotes | TNF-α |
T155 | 60-76 | Protein | denotes | TNF p55 receptor |
T156 | 79-86 | Protein | denotes | TNFp55R |
T157 | 174-177 | Protein | denotes | p65 |
T158 | 237-244 | Protein | denotes | TNFp55R |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T479 | 64-67 | http://www.uniprot.org/uniprot/P01589 | denotes | p55 |
T476 | 43-48 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF-α |
T460 | 174-177 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
T464 | 174-177 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
T471 | 43-46 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
T472 | 60-63 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T171 | 185-200 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T183 | 216-221 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T113 | 25-222 | Sentence | denotes | Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation in endothelial cells. |
T13 | 25-222 | Sentence | denotes | Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation in endothelial cells. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T198 | 237-244 | Protein | denotes | TNFp55R |
T197 | 174-177 | Protein | denotes | p65 |
T196 | 79-86 | Protein | denotes | TNFp55R |
T195 | 60-76 | Protein | denotes | TNF p55 receptor |
T194 | 43-48 | Protein | denotes | TNF-α |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T918 | 43-48 | Protein | denotes | TNF-α |
T919 | 60-76 | Protein | denotes | TNF p55 receptor |
T920 | 79-86 | Protein | denotes | TNFp55R |
T921 | 174-177 | Protein | denotes | p65 |
T922 | 237-244 | Protein | denotes | TNFp55R |
T929 | 185-200 | Phosphorylation | denotes | phosphorylation |
T930 | 160-170 | Negative_regulation | denotes | inhibition |
T931 | 25-39 | Negative_regulation | denotes | Neutralization |
R649 | T918 | T931 | themeOf | TNF-α,Neutralization |
R650 | T921 | T929 | themeOf | p65,phosphorylation |
R652 | T929 | T930 | themeOf | phosphorylation,inhibition |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T763 | 237-244 | Protein | denotes | TNFp55R |
T762 | 174-177 | Protein | denotes | p65 |
T761 | 79-86 | Protein | denotes | TNFp55R |
T760 | 60-76 | Protein | denotes | TNF p55 receptor |
T759 | 43-48 | Protein | denotes | TNF-α |
T773 | 160-170 | Negative_regulation | denotes | inhibition |
T772 | 185-200 | Phosphorylation | denotes | phosphorylation |
T771 | 25-39 | Negative_regulation | denotes | Neutralization |
R558 | T759 | T771 | themeOf | TNF-α,Neutralization |
R559 | T762 | T772 | themeOf | p65,phosphorylation |
R565 | T772 | T773 | themeOf | phosphorylation,inhibition |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T817 | 160-170 | Negative_regulation | denotes | inhibition |
T816 | 185-200 | Phosphorylation | denotes | phosphorylation |
T801 | 43-48 | Protein | denotes | TNF-α |
T802 | 60-76 | Protein | denotes | TNF p55 receptor |
T803 | 79-86 | Protein | denotes | TNFp55R |
T804 | 174-177 | Protein | denotes | p65 |
T805 | 237-244 | Protein | denotes | TNFp55R |
T814 | 25-39 | Negative_regulation | denotes | Neutralization |
T815 | 88-96 | Positive_regulation | denotes | infusion |
R566 | T816 | T817 | themeOf | phosphorylation,inhibition |
R627 | T801 | T814 | themeOf | TNF-α,Neutralization |
R628 | T802 | T815 | themeOf | TNF p55 receptor,infusion |
R629 | T804 | T816 | themeOf | p65,phosphorylation |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T981 | 236-244 | Entity | denotes | sTNFp55R |
T980 | 15-22 | Entity | denotes | antigen |
T972 | 40-48 | Protein | denotes | of TNF-α |
T936 | 171-184 | Entity | denotes | of p65-Thr435 |
T932 | 49-87 | Protein | denotes | by soluble TNF p55 receptor (sTNFp55R) |
T947 | 108-110 | Entity | denotes | SE |
T948 | 171-184 | Protein | denotes | of p65-Thr435 |
T952 | 88-96 | Entity | denotes | infusion |
T953 | 236-244 | Protein | denotes | sTNFp55R |
T960 | 204-221 | Entity | denotes | endothelial cells |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T703 | 236-244 | JJ | denotes | sTNFp55R |
T702 | 234-235 | , | denotes | , |
T701 | 223-234 | RB | denotes | Furthermore |
T700 | 221-222 | . | denotes | . |
T699 | 216-221 | NNS | denotes | cells |
T698 | 204-215 | JJ | denotes | endothelial |
T697 | 201-203 | IN | denotes | in |
T696 | 185-200 | NN | denotes | phosphorylation |
T695 | 174-184 | NN | denotes | p65-Thr435 |
T694 | 171-173 | IN | denotes | of |
T693 | 160-170 | NN | denotes | inhibition |
T692 | 156-159 | IN | denotes | via |
T691 | 148-155 | NNS | denotes | damages |
T690 | 139-147 | JJ | denotes | neuronal |
T689 | 135-138 | CC | denotes | and |
T688 | 129-134 | NN | denotes | edema |
T687 | 119-128 | JJ | denotes | vasogenic |
T686 | 108-118 | JJ | denotes | SE-induced |
T685 | 97-107 | VBD | denotes | attenuated |
T684 | 88-96 | NN | denotes | infusion |
T683 | 86-87 | -RRB- | denotes | ) |
T682 | 78-86 | JJ | denotes | sTNFp55R |
T681 | 77-78 | -LRB- | denotes | ( |
T680 | 68-76 | NN | denotes | receptor |
T679 | 64-67 | NN | denotes | p55 |
T678 | 60-63 | NNP | denotes | TNF |
T677 | 52-59 | JJ | denotes | soluble |
T676 | 49-51 | IN | denotes | by |
T675 | 43-48 | JJ | denotes | TNF-α |
T674 | 40-42 | IN | denotes | of |
T673 | 25-39 | NN | denotes | Neutralization |
T672 | 23-24 | . | denotes | . |
T671 | 22-23 | -RRB- | denotes | ) |
T670 | 15-22 | NN | denotes | antigen |
T669 | 7-14 | NN | denotes | barrier |
R475 | T669 | T670 | compound | barrier,antigen |
R479 | T673 | T685 | nsubj | Neutralization,attenuated |
R480 | T674 | T673 | prep | of,Neutralization |
R481 | T675 | T674 | pobj | TNF-α,of |
R482 | T676 | T673 | prep | by,Neutralization |
R483 | T677 | T680 | amod | soluble,receptor |
R484 | T678 | T680 | nmod | TNF,receptor |
R485 | T679 | T680 | compound | p55,receptor |
R486 | T680 | T684 | nmod | receptor,infusion |
R487 | T681 | T682 | punct | (,sTNFp55R |
R488 | T682 | T680 | appos | sTNFp55R,receptor |
R489 | T683 | T680 | punct | ),receptor |
R490 | T684 | T676 | pobj | infusion,by |
R491 | T685 | T685 | ROOT | attenuated,attenuated |
R492 | T686 | T688 | nmod | SE-induced,edema |
R493 | T687 | T688 | amod | vasogenic,edema |
R494 | T688 | T685 | dobj | edema,attenuated |
R495 | T689 | T688 | cc | and,edema |
R496 | T690 | T691 | amod | neuronal,damages |
R497 | T691 | T688 | conj | damages,edema |
R498 | T692 | T685 | prep | via,attenuated |
R499 | T693 | T692 | pobj | inhibition,via |
R500 | T694 | T693 | prep | of,inhibition |
R501 | T695 | T696 | compound | p65-Thr435,phosphorylation |
R502 | T696 | T694 | pobj | phosphorylation,of |
R503 | T697 | T696 | prep | in,phosphorylation |
R504 | T698 | T699 | amod | endothelial,cells |
R505 | T699 | T697 | pobj | cells,in |
R506 | T700 | T685 | punct | .,attenuated |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T870 | 236-244 | Protein | denotes | sTNFp55R |
T869 | 160-170 | Negative_regulation | denotes | inhibition |
T868 | 160-170 | Negative_regulation | denotes | inhibition |
T867 | 185-200 | Phosphorylation | denotes | phosphorylation |
T866 | 185-200 | Phosphorylation | denotes | phosphorylation |
T865 | 25-39 | Negative_regulation | denotes | Neutralization |
T864 | 178-184 | Protein | denotes | Thr435 |
T863 | 174-177 | Protein | denotes | p65 |
T862 | 78-86 | Protein | denotes | sTNFp55R |
T861 | 60-76 | Protein | denotes | TNF p55 receptor |
T860 | 43-48 | Protein | denotes | TNF-α |
R576 | T866 | T868 | themeOf | phosphorylation,inhibition |
R577 | T867 | T869 | themeOf | phosphorylation,inhibition |
R578 | T868 | T865 | Cause | inhibition,Neutralization |
R579 | T869 | T865 | Cause | inhibition,Neutralization |
R573 | T860 | T865 | themeOf | TNF-α,Neutralization |
R574 | T863 | T866 | themeOf | p65,phosphorylation |
R575 | T864 | T867 | themeOf | Thr435,phosphorylation |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T26 | 43-48 | Protein | denotes | TNF-α |
T27 | 60-76 | Protein | denotes | TNF p55 receptor |
T28 | 79-86 | Protein | denotes | TNFp55R |
T29 | 174-177 | Protein | denotes | p65 |
T30 | 237-244 | Protein | denotes | TNFp55R |
T44 | 25-39 | Negative_regulation | denotes | Neutralization |
T45 | 160-170 | Negative_regulation | denotes | inhibition |
T46 | 185-200 | Phosphorylation | denotes | phosphorylation |
R6 | T26 | T44 | themeOf | TNF-α,Neutralization |
R7 | T27 | T44 | causeOf | TNF p55 receptor,Neutralization |
R8 | T29 | T46 | themeOf | p65,phosphorylation |
R14 | T46 | T45 | themeOf | phosphorylation,inhibition |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T89 | 236-244 | Protein | denotes | sTNFp55R |
T88 | 185-200 | Phosphorylation | denotes | phosphorylation |
T87 | 174-177 | Protein | denotes | p65 |
T86 | 160-170 | Negative_regulation | denotes | inhibition |
T85 | 78-86 | Protein | denotes | sTNFp55R |
T84 | 60-76 | Protein | denotes | TNF p55 receptor |
T83 | 43-48 | Protein | denotes | TNF-α |
T82 | 25-39 | Negative_regulation | denotes | Neutralization |
T58 | 43-48 | Protein | denotes | TNF-α |
T59 | 60-76 | Protein | denotes | TNF p55 receptor |
T60 | 79-86 | Protein | denotes | TNFp55R |
T61 | 174-177 | Protein | denotes | p65 |
T62 | 237-244 | Protein | denotes | TNFp55R |
R27 | T84 | T82 | causeOf | TNF p55 receptor,Neutralization |
R28 | T85 | T84 | equivalentTo | sTNFp55R,TNF p55 receptor |
R29 | T87 | T88 | themeOf | p65,phosphorylation |
R30 | T88 | T86 | themeOf | phosphorylation,inhibition |
R26 | T83 | T82 | themeOf | TNF-α,Neutralization |