PMC:3312845 / 1188-1424 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T408","span":{"begin":220,"end":235},"obj":"NN"},{"id":"T407","span":{"begin":209,"end":219},"obj":"NN"},{"id":"T406","span":{"begin":206,"end":208},"obj":"IN"},{"id":"T405","span":{"begin":195,"end":205},"obj":"NN"},{"id":"T404","span":{"begin":191,"end":194},"obj":"IN"},{"id":"T403","span":{"begin":183,"end":190},"obj":"NN"},{"id":"T402","span":{"begin":174,"end":182},"obj":"JJ"},{"id":"T401","span":{"begin":170,"end":173},"obj":"CC"},{"id":"T400","span":{"begin":164,"end":169},"obj":"NN"},{"id":"T399","span":{"begin":154,"end":163},"obj":"JJ"},{"id":"T398","span":{"begin":143,"end":153},"obj":"JJ"},{"id":"T397","span":{"begin":132,"end":142},"obj":"VB"},{"id":"T396","span":{"begin":123,"end":131},"obj":"NN"},{"id":"T395","span":{"begin":121,"end":122},"obj":"-RRB-"},{"id":"T394","span":{"begin":113,"end":121},"obj":"NN"},{"id":"T393","span":{"begin":112,"end":113},"obj":"-LRB-"},{"id":"T392","span":{"begin":103,"end":111},"obj":"NN"},{"id":"T391","span":{"begin":99,"end":102},"obj":"NN"},{"id":"T390","span":{"begin":95,"end":98},"obj":"NN"},{"id":"T389","span":{"begin":87,"end":94},"obj":"JJ"},{"id":"T388","span":{"begin":84,"end":86},"obj":"IN"},{"id":"T387","span":{"begin":78,"end":83},"obj":"NN"},{"id":"T386","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T385","span":{"begin":60,"end":74},"obj":"NN"},{"id":"T384","span":{"begin":57,"end":58},"obj":"-RRB-"},{"id":"T383","span":{"begin":50,"end":57},"obj":"NN"},{"id":"T382","span":{"begin":42,"end":49},"obj":"NN"},{"id":"T381","span":{"begin":30,"end":41},"obj":"JJ"},{"id":"T380","span":{"begin":27,"end":29},"obj":"DT"},{"id":"T379","span":{"begin":26,"end":27},"obj":"-LRB-"},{"id":"T378","span":{"begin":15,"end":25},"obj":"NN"},{"id":"T377","span":{"begin":8,"end":14},"obj":"NN"},{"id":"T376","span":{"begin":5,"end":7},"obj":"IN"}],"relations":[{"id":"R207","pred":"arg2Of","subj":"T378","obj":"T376"},{"id":"R208","pred":"arg1Of","subj":"T378","obj":"T377"},{"id":"R209","pred":"arg1Of","subj":"T378","obj":"T379"},{"id":"R210","pred":"arg2Of","subj":"T383","obj":"T379"},{"id":"R211","pred":"arg1Of","subj":"T383","obj":"T380"},{"id":"R212","pred":"arg1Of","subj":"T383","obj":"T381"},{"id":"R213","pred":"arg1Of","subj":"T383","obj":"T382"},{"id":"R214","pred":"arg3Of","subj":"T384","obj":"T379"},{"id":"R215","pred":"arg1Of","subj":"T385","obj":"T386"},{"id":"R216","pred":"arg1Of","subj":"T385","obj":"T388"},{"id":"R217","pred":"arg1Of","subj":"T385","obj":"T397"},{"id":"R218","pred":"arg2Of","subj":"T387","obj":"T386"},{"id":"R219","pred":"arg1Of","subj":"T392","obj":"T389"},{"id":"R220","pred":"arg1Of","subj":"T392","obj":"T390"},{"id":"R221","pred":"arg1Of","subj":"T392","obj":"T391"},{"id":"R222","pred":"arg1Of","subj":"T392","obj":"T393"},{"id":"R223","pred":"arg2Of","subj":"T394","obj":"T393"},{"id":"R224","pred":"arg3Of","subj":"T395","obj":"T393"},{"id":"R225","pred":"arg2Of","subj":"T396","obj":"T388"},{"id":"R226","pred":"arg1Of","subj":"T396","obj":"T392"},{"id":"R227","pred":"arg1Of","subj":"T397","obj":"T404"},{"id":"R228","pred":"arg1Of","subj":"T399","obj":"T400"},{"id":"R229","pred":"arg1Of","subj":"T399","obj":"T401"},{"id":"R230","pred":"arg2Of","subj":"T402","obj":"T401"},{"id":"R231","pred":"arg2Of","subj":"T403","obj":"T397"},{"id":"R232","pred":"arg1Of","subj":"T403","obj":"T398"},{"id":"R233","pred":"arg1Of","subj":"T403","obj":"T399"},{"id":"R234","pred":"arg1Of","subj":"T403","obj":"T402"},{"id":"R235","pred":"arg2Of","subj":"T405","obj":"T404"},{"id":"R236","pred":"arg1Of","subj":"T405","obj":"T406"},{"id":"R237","pred":"arg2Of","subj":"T408","obj":"T406"},{"id":"R238","pred":"arg1Of","subj":"T408","obj":"T407"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T154","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T155","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T156","span":{"begin":114,"end":121},"obj":"Protein"},{"id":"T157","span":{"begin":209,"end":212},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T479","span":{"begin":99,"end":102},"obj":"http://www.uniprot.org/uniprot/P01589"},{"id":"T476","span":{"begin":78,"end":83},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T460","span":{"begin":209,"end":212},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T464","span":{"begin":209,"end":212},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T471","span":{"begin":78,"end":81},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T472","span":{"begin":95,"end":98},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T171","span":{"begin":220,"end":235},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    simple1

    {"project":"simple1","denotations":[{"id":"T197","span":{"begin":209,"end":212},"obj":"Protein"},{"id":"T196","span":{"begin":114,"end":121},"obj":"Protein"},{"id":"T195","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T194","span":{"begin":78,"end":83},"obj":"Protein"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T918","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T919","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T920","span":{"begin":114,"end":121},"obj":"Protein"},{"id":"T921","span":{"begin":209,"end":212},"obj":"Protein"},{"id":"T929","span":{"begin":220,"end":235},"obj":"Phosphorylation"},{"id":"T930","span":{"begin":195,"end":205},"obj":"Negative_regulation"},{"id":"T931","span":{"begin":60,"end":74},"obj":"Negative_regulation"}],"relations":[{"id":"R649","pred":"themeOf","subj":"T918","obj":"T931"},{"id":"R650","pred":"themeOf","subj":"T921","obj":"T929"},{"id":"R652","pred":"themeOf","subj":"T929","obj":"T930"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T762","span":{"begin":209,"end":212},"obj":"Protein"},{"id":"T761","span":{"begin":114,"end":121},"obj":"Protein"},{"id":"T760","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T759","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T773","span":{"begin":195,"end":205},"obj":"Negative_regulation"},{"id":"T772","span":{"begin":220,"end":235},"obj":"Phosphorylation"},{"id":"T771","span":{"begin":60,"end":74},"obj":"Negative_regulation"}],"relations":[{"id":"R558","pred":"themeOf","subj":"T759","obj":"T771"},{"id":"R559","pred":"themeOf","subj":"T762","obj":"T772"},{"id":"R565","pred":"themeOf","subj":"T772","obj":"T773"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T817","span":{"begin":195,"end":205},"obj":"Negative_regulation"},{"id":"T816","span":{"begin":220,"end":235},"obj":"Phosphorylation"},{"id":"T801","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T802","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T803","span":{"begin":114,"end":121},"obj":"Protein"},{"id":"T804","span":{"begin":209,"end":212},"obj":"Protein"},{"id":"T814","span":{"begin":60,"end":74},"obj":"Negative_regulation"},{"id":"T815","span":{"begin":123,"end":131},"obj":"Positive_regulation"}],"relations":[{"id":"R566","pred":"themeOf","subj":"T816","obj":"T817"},{"id":"R627","pred":"themeOf","subj":"T801","obj":"T814"},{"id":"R628","pred":"themeOf","subj":"T802","obj":"T815"},{"id":"R629","pred":"themeOf","subj":"T804","obj":"T816"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T980","span":{"begin":50,"end":57},"obj":"Entity"},{"id":"T972","span":{"begin":75,"end":83},"obj":"Protein"},{"id":"T936","span":{"begin":206,"end":219},"obj":"Entity"},{"id":"T932","span":{"begin":84,"end":122},"obj":"Protein"},{"id":"T947","span":{"begin":143,"end":145},"obj":"Entity"},{"id":"T948","span":{"begin":206,"end":219},"obj":"Protein"},{"id":"T952","span":{"begin":123,"end":131},"obj":"Entity"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T696","span":{"begin":220,"end":235},"obj":"NN"},{"id":"T695","span":{"begin":209,"end":219},"obj":"NN"},{"id":"T694","span":{"begin":206,"end":208},"obj":"IN"},{"id":"T693","span":{"begin":195,"end":205},"obj":"NN"},{"id":"T692","span":{"begin":191,"end":194},"obj":"IN"},{"id":"T691","span":{"begin":183,"end":190},"obj":"NNS"},{"id":"T690","span":{"begin":174,"end":182},"obj":"JJ"},{"id":"T689","span":{"begin":170,"end":173},"obj":"CC"},{"id":"T688","span":{"begin":164,"end":169},"obj":"NN"},{"id":"T687","span":{"begin":154,"end":163},"obj":"JJ"},{"id":"T686","span":{"begin":143,"end":153},"obj":"JJ"},{"id":"T685","span":{"begin":132,"end":142},"obj":"VBD"},{"id":"T684","span":{"begin":123,"end":131},"obj":"NN"},{"id":"T683","span":{"begin":121,"end":122},"obj":"-RRB-"},{"id":"T682","span":{"begin":113,"end":121},"obj":"JJ"},{"id":"T681","span":{"begin":112,"end":113},"obj":"-LRB-"},{"id":"T680","span":{"begin":103,"end":111},"obj":"NN"},{"id":"T679","span":{"begin":99,"end":102},"obj":"NN"},{"id":"T678","span":{"begin":95,"end":98},"obj":"NNP"},{"id":"T677","span":{"begin":87,"end":94},"obj":"JJ"},{"id":"T676","span":{"begin":84,"end":86},"obj":"IN"},{"id":"T675","span":{"begin":78,"end":83},"obj":"JJ"},{"id":"T674","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T673","span":{"begin":60,"end":74},"obj":"NN"},{"id":"T672","span":{"begin":58,"end":59},"obj":"."},{"id":"T671","span":{"begin":57,"end":58},"obj":"-RRB-"},{"id":"T670","span":{"begin":50,"end":57},"obj":"NN"},{"id":"T669","span":{"begin":42,"end":49},"obj":"NN"},{"id":"T668","span":{"begin":30,"end":41},"obj":"JJ"},{"id":"T667","span":{"begin":27,"end":29},"obj":"DT"},{"id":"T666","span":{"begin":26,"end":27},"obj":"-LRB-"},{"id":"T665","span":{"begin":15,"end":25},"obj":"NN"},{"id":"T664","span":{"begin":8,"end":14},"obj":"NNP"},{"id":"T663","span":{"begin":5,"end":7},"obj":"IN"}],"relations":[{"id":"R470","pred":"compound","subj":"T664","obj":"T665"},{"id":"R471","pred":"pobj","subj":"T665","obj":"T663"},{"id":"R472","pred":"punct","subj":"T666","obj":"T665"},{"id":"R473","pred":"det","subj":"T667","obj":"T670"},{"id":"R474","pred":"amod","subj":"T668","obj":"T670"},{"id":"R475","pred":"compound","subj":"T669","obj":"T670"},{"id":"R476","pred":"appos","subj":"T670","obj":"T665"},{"id":"R477","pred":"punct","subj":"T671","obj":"T665"},{"id":"R479","pred":"nsubj","subj":"T673","obj":"T685"},{"id":"R480","pred":"prep","subj":"T674","obj":"T673"},{"id":"R481","pred":"pobj","subj":"T675","obj":"T674"},{"id":"R482","pred":"prep","subj":"T676","obj":"T673"},{"id":"R483","pred":"amod","subj":"T677","obj":"T680"},{"id":"R484","pred":"nmod","subj":"T678","obj":"T680"},{"id":"R485","pred":"compound","subj":"T679","obj":"T680"},{"id":"R486","pred":"nmod","subj":"T680","obj":"T684"},{"id":"R487","pred":"punct","subj":"T681","obj":"T682"},{"id":"R488","pred":"appos","subj":"T682","obj":"T680"},{"id":"R489","pred":"punct","subj":"T683","obj":"T680"},{"id":"R490","pred":"pobj","subj":"T684","obj":"T676"},{"id":"R491","pred":"ROOT","subj":"T685","obj":"T685"},{"id":"R492","pred":"nmod","subj":"T686","obj":"T688"},{"id":"R493","pred":"amod","subj":"T687","obj":"T688"},{"id":"R494","pred":"dobj","subj":"T688","obj":"T685"},{"id":"R495","pred":"cc","subj":"T689","obj":"T688"},{"id":"R496","pred":"amod","subj":"T690","obj":"T691"},{"id":"R497","pred":"conj","subj":"T691","obj":"T688"},{"id":"R498","pred":"prep","subj":"T692","obj":"T685"},{"id":"R499","pred":"pobj","subj":"T693","obj":"T692"},{"id":"R500","pred":"prep","subj":"T694","obj":"T693"},{"id":"R501","pred":"compound","subj":"T695","obj":"T696"},{"id":"R502","pred":"pobj","subj":"T696","obj":"T694"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T869","span":{"begin":195,"end":205},"obj":"Negative_regulation"},{"id":"T868","span":{"begin":195,"end":205},"obj":"Negative_regulation"},{"id":"T867","span":{"begin":220,"end":235},"obj":"Phosphorylation"},{"id":"T866","span":{"begin":220,"end":235},"obj":"Phosphorylation"},{"id":"T865","span":{"begin":60,"end":74},"obj":"Negative_regulation"},{"id":"T864","span":{"begin":213,"end":219},"obj":"Protein"},{"id":"T863","span":{"begin":209,"end":212},"obj":"Protein"},{"id":"T862","span":{"begin":113,"end":121},"obj":"Protein"},{"id":"T861","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T860","span":{"begin":78,"end":83},"obj":"Protein"}],"relations":[{"id":"R576","pred":"themeOf","subj":"T866","obj":"T868"},{"id":"R577","pred":"themeOf","subj":"T867","obj":"T869"},{"id":"R578","pred":"Cause","subj":"T868","obj":"T865"},{"id":"R579","pred":"Cause","subj":"T869","obj":"T865"},{"id":"R573","pred":"themeOf","subj":"T860","obj":"T865"},{"id":"R574","pred":"themeOf","subj":"T863","obj":"T866"},{"id":"R575","pred":"themeOf","subj":"T864","obj":"T867"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    testone

    {"project":"testone","denotations":[{"id":"T26","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T27","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T28","span":{"begin":114,"end":121},"obj":"Protein"},{"id":"T29","span":{"begin":209,"end":212},"obj":"Protein"},{"id":"T43","span":{"begin":15,"end":25},"obj":"Gene_expression"},{"id":"T44","span":{"begin":60,"end":74},"obj":"Negative_regulation"},{"id":"T45","span":{"begin":195,"end":205},"obj":"Negative_regulation"},{"id":"T46","span":{"begin":220,"end":235},"obj":"Phosphorylation"}],"relations":[{"id":"R6","pred":"themeOf","subj":"T26","obj":"T44"},{"id":"R7","pred":"causeOf","subj":"T27","obj":"T44"},{"id":"R8","pred":"themeOf","subj":"T29","obj":"T46"},{"id":"R14","pred":"themeOf","subj":"T46","obj":"T45"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}

    test3

    {"project":"test3","denotations":[{"id":"T88","span":{"begin":220,"end":235},"obj":"Phosphorylation"},{"id":"T87","span":{"begin":209,"end":212},"obj":"Protein"},{"id":"T86","span":{"begin":195,"end":205},"obj":"Negative_regulation"},{"id":"T85","span":{"begin":113,"end":121},"obj":"Protein"},{"id":"T84","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T83","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T82","span":{"begin":60,"end":74},"obj":"Negative_regulation"},{"id":"T81","span":{"begin":15,"end":25},"obj":"Gene_expression"},{"id":"T58","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T59","span":{"begin":95,"end":111},"obj":"Protein"},{"id":"T60","span":{"begin":114,"end":121},"obj":"Protein"},{"id":"T61","span":{"begin":209,"end":212},"obj":"Protein"}],"relations":[{"id":"R27","pred":"causeOf","subj":"T84","obj":"T82"},{"id":"R28","pred":"equivalentTo","subj":"T85","obj":"T84"},{"id":"R29","pred":"themeOf","subj":"T87","obj":"T88"},{"id":"R30","pred":"themeOf","subj":"T88","obj":"T86"},{"id":"R26","pred":"themeOf","subj":"T83","obj":"T82"}],"text":"nied by SMI-71 expression (an endothelial barrier antigen). Neutralization of TNF-α by soluble TNF p55 receptor (sTNFp55R) infusion attenuated SE-induced vasogenic edema and neuronal damages via inhibition of p65-Thr435 phosphorylation "}