PMC:3291650 / 6459-6706
Annnotations
test3
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2_test
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pmc-enju-pas
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the other hand, deubiquitinating enzymes (DUBs), such as DUBA [28], CYLD [29], [30] and OTUB1/2 [31] have been shown to negatively regulate RLR signaling by specifically removing K63-linked polyubiquitin chains from several signaling molecules."}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1070","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T1069","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T1068","span":{"begin":60,"end":64},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"On the other hand, deubiquitinating enzymes (DUBs), such as DUBA [28], CYLD [29], [30] and OTUB1/2 [31] have been shown to negatively regulate RLR signaling by specifically removing K63-linked polyubiquitin chains from several signaling molecules."}
GO-BP
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GO-MF
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sentences
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simple1
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BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T4134","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T4133","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T4132","span":{"begin":60,"end":64},"obj":"Protein"}],"text":"On the other hand, deubiquitinating enzymes (DUBs), such as DUBA [28], CYLD [29], [30] and OTUB1/2 [31] have been shown to negatively regulate RLR signaling by specifically removing K63-linked polyubiquitin chains from several signaling molecules."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T3723","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T3722","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T3721","span":{"begin":60,"end":64},"obj":"Protein"}],"text":"On the other hand, deubiquitinating enzymes (DUBs), such as DUBA [28], CYLD [29], [30] and OTUB1/2 [31] have been shown to negatively regulate RLR signaling by specifically removing K63-linked polyubiquitin chains from several signaling molecules."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T3818","span":{"begin":134,"end":142},"obj":"Negative_regulation"},{"id":"T3791","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T3790","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T3789","span":{"begin":60,"end":64},"obj":"Protein"}],"relations":[{"id":"R2962","pred":"causeOf","subj":"T3789","obj":"T3818"},{"id":"R2963","pred":"themeOf","subj":"T3791","obj":"T3818"}],"text":"On the other hand, deubiquitinating enzymes (DUBs), such as DUBA [28], CYLD [29], [30] and OTUB1/2 [31] have been shown to negatively regulate RLR signaling by specifically removing K63-linked polyubiquitin chains from several signaling molecules."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T4358","span":{"begin":143,"end":156},"obj":"Positive_regulation"},{"id":"T4357","span":{"begin":60,"end":218},"obj":"Regulation"},{"id":"T4340","span":{"begin":71,"end":86},"obj":"Protein"},{"id":"T4332","span":{"begin":60,"end":69},"obj":"Protein"},{"id":"T4313","span":{"begin":237,"end":246},"obj":"Entity"},{"id":"T4299","span":{"begin":45,"end":49},"obj":"Protein"},{"id":"T4285","span":{"begin":182,"end":192},"obj":"Entity"},{"id":"T4283","span":{"begin":193,"end":206},"obj":"Protein"},{"id":"T4263","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T4205","span":{"begin":91,"end":103},"obj":"Protein"}],"relations":[{"id":"R3111","pred":"causeOf","subj":"T4263","obj":"T4358"},{"id":"R3112","pred":"themeOf","subj":"T4358","obj":"T4357"}],"text":"On the other hand, deubiquitinating enzymes (DUBs), such as DUBA [28], CYLD [29], [30] and OTUB1/2 [31] have been shown to negatively regulate RLR signaling by specifically removing K63-linked polyubiquitin chains from several signaling molecules."}
bionlp-st-ge-2016-spacy-parsed
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bionlp-st-ge-2016-test-tees
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testone
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