PMC:3291650 / 36929-37501
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16818 | 560-571 | NN | denotes | antibiotics |
| T16817 | 556-559 | CC | denotes | and |
| T16816 | 547-555 | NN | denotes | pyruvate |
| T16815 | 540-546 | NN | denotes | sodium |
| T16814 | 537-539 | NN | denotes | mM |
| T16813 | 533-536 | CD | denotes | 0.4 |
| T16812 | 531-532 | -COMMA- | denotes | , |
| T16811 | 520-531 | NN | denotes | L-glutamine |
| T16810 | 517-519 | NN | denotes | mM |
| T16809 | 515-516 | CD | denotes | 2 |
| T16808 | 513-514 | -COMMA- | denotes | , |
| T16807 | 510-513 | NN | denotes | FCS |
| T16806 | 508-509 | NN | denotes | % |
| T16805 | 507-508 | CD | denotes | 1 |
| T16804 | 502-506 | IN | denotes | with |
| T16803 | 489-501 | VB | denotes | supplemented |
| T16802 | 487-488 | -RRB- | denotes | ) |
| T16801 | 482-487 | NNP | denotes | Gibco |
| T16800 | 481-482 | -LRB- | denotes | ( |
| T16799 | 476-480 | CD | denotes | 1640 |
| T16798 | 471-475 | NN | denotes | RPMI |
| T16797 | 468-470 | IN | denotes | in |
| T16796 | 459-467 | VB | denotes | cultured |
| T16795 | 454-458 | VB | denotes | were |
| T16794 | 442-453 | NN | denotes | macrophages |
| T16793 | 433-441 | JJ | denotes | Alveolar |
| T16792 | 427-431 | NN | denotes | EDTA |
| T16791 | 424-426 | NN | denotes | mM |
| T16790 | 422-423 | CD | denotes | 1 |
| T16789 | 411-421 | VB | denotes | containing |
| T16788 | 406-410 | NN | denotes | HBSS |
| T16787 | 401-405 | IN | denotes | with |
| T16786 | 395-400 | NN | denotes | times |
| T16785 | 393-394 | CD | denotes | 4 |
| T16784 | 385-392 | VB | denotes | flushed |
| T16783 | 381-384 | VB | denotes | was |
| T16782 | 376-380 | NN | denotes | lung |
| T16781 | 372-375 | DT | denotes | the |
| T16780 | 368-371 | CC | denotes | and |
| T16779 | 358-367 | VB | denotes | canulated |
| T16778 | 354-357 | VB | denotes | was |
| T16777 | 346-353 | NN | denotes | trachea |
| T16776 | 342-345 | DT | denotes | the |
| T16775 | 340-341 | -COMMA- | denotes | , |
| T16774 | 329-340 | NN | denotes | macrophages |
| T16773 | 320-328 | JJ | denotes | alveolar |
| T16772 | 317-319 | IN | denotes | of |
| T16771 | 307-316 | NN | denotes | isolation |
| T16770 | 303-306 | DT | denotes | the |
| T16769 | 299-302 | IN | denotes | For |
| T16768 | 287-297 | NN | denotes | antibodies |
| T16767 | 278-286 | JJ | denotes | specific |
| T16766 | 272-277 | NN | denotes | CD11b |
| T16765 | 268-271 | CC | denotes | and |
| T16764 | 262-267 | NN | denotes | F4/80 |
| T16763 | 256-261 | VB | denotes | using |
| T16762 | 246-255 | NN | denotes | cytometry |
| T16761 | 241-245 | NN | denotes | flow |
| T16760 | 238-240 | IN | denotes | by |
| T16759 | 229-237 | VB | denotes | measured |
| T16758 | 226-228 | IN | denotes | as |
| T16757 | 219-225 | NN | denotes | purity |
| T16756 | 217-218 | NN | denotes | % |
| T16755 | 214-217 | CD | denotes | ≥95 |
| T16754 | 211-213 | IN | denotes | of |
| T16753 | 206-210 | VB | denotes | were |
| T16752 | 201-205 | NN | denotes | BMDM |
| T16751 | 194-199 | NN | denotes | M-CSF |
| T16750 | 182-193 | JJ | denotes | recombinant |
| T16749 | 176-181 | NN | denotes | ng/ml |
| T16748 | 173-175 | CD | denotes | 40 |
| T16747 | 169-172 | CC | denotes | and |
| T16746 | 157-168 | NN | denotes | antibiotics |
| T16745 | 155-156 | -COMMA- | denotes | , |
| T16744 | 147-155 | NN | denotes | pyruvate |
| T16743 | 140-146 | NN | denotes | sodium |
| T16742 | 137-139 | NN | denotes | mM |
| T16741 | 133-136 | CD | denotes | 0.4 |
| T16740 | 131-132 | -COMMA- | denotes | , |
| T16739 | 120-131 | NN | denotes | L-glutamine |
| T16738 | 117-119 | NN | denotes | mM |
| T16737 | 115-116 | CD | denotes | 2 |
| T16736 | 113-114 | -COMMA- | denotes | , |
| T16735 | 110-113 | NN | denotes | FCS |
| T16734 | 108-109 | NN | denotes | % |
| T16733 | 106-108 | CD | denotes | 10 |
| T16732 | 101-105 | IN | denotes | with |
| T16731 | 88-100 | VB | denotes | supplemented |
| T16730 | 86-87 | -RRB- | denotes | ) |
| T16729 | 81-86 | NNP | denotes | Gibco |
| T16728 | 80-81 | -LRB- | denotes | ( |
| T16727 | 75-79 | CD | denotes | 1640 |
| T16726 | 70-74 | NN | denotes | RPMI |
| T16725 | 67-69 | IN | denotes | in |
| T16724 | 62-66 | NN | denotes | days |
| T16723 | 60-61 | CD | denotes | 7 |
| T16722 | 51-59 | VB | denotes | cultured |
| T16721 | 46-50 | VB | denotes | were |
| T16720 | 40-45 | NN | denotes | cells |
| T16719 | 33-39 | NN | denotes | marrow |
| T16718 | 28-32 | NN | denotes | bone |
| T16717 | 26-27 | -COMMA- | denotes | , |
| T16716 | 22-26 | NN | denotes | BMDM |
| T16715 | 19-21 | IN | denotes | of |
| T16714 | 8-18 | NN | denotes | generation |
| T16713 | 4-7 | DT | denotes | the |
| T16712 | 0-3 | IN | denotes | For |
| R12558 | T16714 | T16712 | arg2Of | generation,For |
| R12559 | T16714 | T16713 | arg1Of | generation,the |
| R12560 | T16714 | T16715 | arg1Of | generation,of |
| R12561 | T16716 | T16715 | arg2Of | BMDM,of |
| R12562 | T16720 | T16718 | arg1Of | cells,bone |
| R12563 | T16720 | T16719 | arg1Of | cells,marrow |
| R12564 | T16720 | T16721 | arg1Of | cells,were |
| R12565 | T16720 | T16722 | arg2Of | cells,cultured |
| R12566 | T16722 | T16712 | arg1Of | cultured,For |
| R12567 | T16722 | T16717 | arg1Of | cultured,"," |
| R12568 | T16722 | T16721 | arg2Of | cultured,were |
| R12569 | T16722 | T16724 | arg1Of | cultured,days |
| R12570 | T16724 | T16723 | arg1Of | days,7 |
| R12571 | T16724 | T16725 | arg1Of | days,in |
| R12572 | T16724 | T16731 | arg2Of | days,supplemented |
| R12573 | T16726 | T16725 | arg2Of | RPMI,in |
| R12574 | T16726 | T16727 | arg1Of | RPMI,1640 |
| R12575 | T16726 | T16728 | arg1Of | RPMI,( |
| R12576 | T16729 | T16728 | arg2Of | Gibco,( |
| R12577 | T16730 | T16728 | arg3Of | ),( |
| R12578 | T16731 | T16732 | arg1Of | supplemented,with |
| R12579 | T16733 | T16734 | arg1Of | 10,% |
| R12580 | T16735 | T16733 | arg1Of | FCS,10 |
| R12581 | T16735 | T16736 | arg1Of | FCS,"," |
| R12582 | T16736 | T16740 | arg1Of | ",","," |
| R12583 | T16737 | T16738 | arg1Of | 2,mM |
| R12584 | T16739 | T16736 | arg2Of | L-glutamine,"," |
| R12585 | T16739 | T16737 | arg1Of | L-glutamine,2 |
| R12586 | T16740 | T16745 | arg1Of | ",","," |
| R12587 | T16741 | T16742 | arg1Of | 0.4,mM |
| R12588 | T16744 | T16740 | arg2Of | pyruvate,"," |
| R12589 | T16744 | T16741 | arg1Of | pyruvate,0.4 |
| R12590 | T16744 | T16743 | arg1Of | pyruvate,sodium |
| R12591 | T16745 | T16747 | arg1Of | ",",and |
| R12592 | T16746 | T16745 | arg2Of | antibiotics,"," |
| R12593 | T16747 | T16732 | arg2Of | and,with |
| R12594 | T16751 | T16747 | arg2Of | M-CSF,and |
| R12595 | T16751 | T16748 | arg1Of | M-CSF,40 |
| R12596 | T16751 | T16749 | arg1Of | M-CSF,ng/ml |
| R12597 | T16751 | T16750 | arg1Of | M-CSF,recombinant |
| R12598 | T16752 | T16753 | arg1Of | BMDM,were |
| R12599 | T16752 | T16754 | arg1Of | BMDM,of |
| R12600 | T16753 | T16758 | arg1Of | were,as |
| R12601 | T16754 | T16753 | arg2Of | of,were |
| R12602 | T16755 | T16756 | arg1Of | ≥95,% |
| R12603 | T16757 | T16754 | arg2Of | purity,of |
| R12604 | T16757 | T16755 | arg1Of | purity,≥95 |
| R12605 | T16759 | T16758 | arg2Of | measured,as |
| R12606 | T16762 | T16759 | arg1Of | cytometry,measured |
| R12607 | T16762 | T16760 | arg2Of | cytometry,by |
| R12608 | T16762 | T16761 | arg1Of | cytometry,flow |
| R12609 | T16762 | T16763 | arg1Of | cytometry,using |
| R12610 | T16764 | T16765 | arg1Of | F4/80,and |
| R12611 | T16766 | T16765 | arg2Of | CD11b,and |
| R12612 | T16768 | T16763 | arg2Of | antibodies,using |
| R12613 | T16768 | T16764 | arg1Of | antibodies,F4/80 |
| R12614 | T16768 | T16766 | arg1Of | antibodies,CD11b |
| R12615 | T16768 | T16767 | arg1Of | antibodies,specific |
| R12616 | T16771 | T16769 | arg2Of | isolation,For |
| R12617 | T16771 | T16770 | arg1Of | isolation,the |
| R12618 | T16771 | T16772 | arg1Of | isolation,of |
| R12619 | T16774 | T16772 | arg2Of | macrophages,of |
| R12620 | T16774 | T16773 | arg1Of | macrophages,alveolar |
| R12621 | T16777 | T16776 | arg1Of | trachea,the |
| R12622 | T16777 | T16778 | arg1Of | trachea,was |
| R12623 | T16777 | T16779 | arg2Of | trachea,canulated |
| R12624 | T16779 | T16778 | arg2Of | canulated,was |
| R12625 | T16779 | T16780 | arg1Of | canulated,and |
| R12626 | T16780 | T16769 | arg1Of | and,For |
| R12627 | T16780 | T16775 | arg1Of | and,"," |
| R12628 | T16782 | T16781 | arg1Of | lung,the |
| R12629 | T16782 | T16783 | arg1Of | lung,was |
| R12630 | T16782 | T16784 | arg2Of | lung,flushed |
| R12631 | T16784 | T16780 | arg2Of | flushed,and |
| R12632 | T16784 | T16783 | arg2Of | flushed,was |
| R12633 | T16784 | T16786 | arg1Of | flushed,times |
| R12634 | T16786 | T16785 | arg1Of | times,4 |
| R12635 | T16786 | T16787 | arg1Of | times,with |
| R12636 | T16786 | T16789 | arg1Of | times,containing |
| R12637 | T16788 | T16787 | arg2Of | HBSS,with |
| R12638 | T16790 | T16791 | arg1Of | 1,mM |
| R12639 | T16792 | T16789 | arg2Of | EDTA,containing |
| R12640 | T16792 | T16790 | arg1Of | EDTA,1 |
| R12641 | T16794 | T16793 | arg1Of | macrophages,Alveolar |
| R12642 | T16794 | T16795 | arg1Of | macrophages,were |
| R12643 | T16794 | T16796 | arg2Of | macrophages,cultured |
| R12644 | T16796 | T16795 | arg2Of | cultured,were |
| R12645 | T16796 | T16797 | arg1Of | cultured,in |
| R12646 | T16798 | T16797 | arg2Of | RPMI,in |
| R12647 | T16798 | T16799 | arg1Of | RPMI,1640 |
| R12648 | T16798 | T16800 | arg1Of | RPMI,( |
| R12649 | T16798 | T16803 | arg2Of | RPMI,supplemented |
| R12650 | T16801 | T16800 | arg2Of | Gibco,( |
| R12651 | T16802 | T16800 | arg3Of | ),( |
| R12652 | T16803 | T16804 | arg1Of | supplemented,with |
| R12653 | T16805 | T16806 | arg1Of | 1,% |
| R12654 | T16807 | T16805 | arg1Of | FCS,1 |
| R12655 | T16807 | T16808 | arg1Of | FCS,"," |
| R12656 | T16808 | T16812 | arg1Of | ",","," |
| R12657 | T16809 | T16810 | arg1Of | 2,mM |
| R12658 | T16811 | T16808 | arg2Of | L-glutamine,"," |
| R12659 | T16811 | T16809 | arg1Of | L-glutamine,2 |
| R12660 | T16812 | T16817 | arg1Of | ",",and |
| R12661 | T16813 | T16814 | arg1Of | 0.4,mM |
| R12662 | T16816 | T16812 | arg2Of | pyruvate,"," |
| R12663 | T16816 | T16813 | arg1Of | pyruvate,0.4 |
| R12664 | T16816 | T16815 | arg1Of | pyruvate,sodium |
| R12665 | T16817 | T16804 | arg2Of | and,with |
| R12666 | T16818 | T16817 | arg2Of | antibiotics,and |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17081 | 196-199 | http://www.uniprot.org/uniprot/P04141 | denotes | CSF |
| T17080 | 194-199 | http://www.uniprot.org/uniprot/P09603 | denotes | M-CSF |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16542 | 376-380 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T16541 | 346-353 | http://purl.obolibrary.org/obo/UBERON_0003126 | denotes | trachea |
| T16540 | 28-39 | http://purl.obolibrary.org/obo/UBERON_0002371 | denotes | bone marrow |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16558 | 433-441 | http://purl.obolibrary.org/obo/GO_0048286 | denotes | Alveolar |
| T16557 | 320-328 | http://purl.obolibrary.org/obo/GO_0048286 | denotes | alveolar |
| T16556 | 28-45 | http://purl.obolibrary.org/obo/GO_0071838 | denotes | bone marrow cells |
| T16555 | 28-45 | http://purl.obolibrary.org/obo/GO_0071839 | denotes | bone marrow cells |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16559 | 287-297 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16564 | 287-297 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
| T16563 | 287-297 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
| T16562 | 40-45 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16550 | 433-572 | Sentence | denotes | Alveolar macrophages were cultured in RPMI 1640 (Gibco) supplemented with 1% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate and antibiotics. |
| T16549 | 299-432 | Sentence | denotes | For the isolation of alveolar macrophages, the trachea was canulated and the lung was flushed 4 times with HBSS containing 1 mM EDTA. |
| T16548 | 201-298 | Sentence | denotes | BMDM were of ≥95% purity as measured by flow cytometry using F4/80 and CD11b specific antibodies. |
| T16547 | 0-200 | Sentence | denotes | For the generation of BMDM, bone marrow cells were cultured 7 days in RPMI 1640 (Gibco) supplemented with 10% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate, antibiotics and 40 ng/ml recombinant M-CSF. |
| T236 | 0-200 | Sentence | denotes | For the generation of BMDM, bone marrow cells were cultured 7 days in RPMI 1640 (Gibco) supplemented with 10% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate, antibiotics and 40 ng/ml recombinant M-CSF. |
| T237 | 201-298 | Sentence | denotes | BMDM were of ≥95% purity as measured by flow cytometry using F4/80 and CD11b specific antibodies. |
| T238 | 299-432 | Sentence | denotes | For the isolation of alveolar macrophages, the trachea was canulated and the lung was flushed 4 times with HBSS containing 1 mM EDTA. |
| T239 | 433-572 | Sentence | denotes | Alveolar macrophages were cultured in RPMI 1640 (Gibco) supplemented with 1% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate and antibiotics. |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17139 | 272-297 | Entity | denotes | CD11b specific antibodies |
| T17137 | 106-155 | Entity | denotes | 10% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate |
| T17135 | 317-340 | Entity | denotes | of alveolar macrophages |
| T17157 | 342-367 | Binding | denotes | the trachea was canulated |
| T17156 | 176-199 | Protein | denotes | ng/ml recombinant M-CSF |
| T17155 | 115-131 | Entity | denotes | 2 mM L-glutamine |
| T17154 | 515-531 | Entity | denotes | 2 mM L-glutamine |
| T17152 | 422-431 | Entity | denotes | 1 mM EDTA |
| T17150 | 433-453 | Entity | denotes | Alveolar macrophages |
| T17145 | 533-555 | Entity | denotes | 0.4 mM sodium pyruvate |
| T17143 | 28-45 | Entity | denotes | bone marrow cells |
| T17142 | 560-571 | Entity | denotes | antibiotics |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17076 | 571-572 | . | denotes | . |
| T17075 | 560-571 | NNS | denotes | antibiotics |
| T17074 | 556-559 | CC | denotes | and |
| T17073 | 547-555 | NN | denotes | pyruvate |
| T17072 | 540-546 | NN | denotes | sodium |
| T17071 | 537-539 | NNP | denotes | mM |
| T17070 | 533-536 | CD | denotes | 0.4 |
| T17069 | 531-532 | , | denotes | , |
| T17068 | 520-531 | NNP | denotes | L-glutamine |
| T17067 | 517-519 | NNP | denotes | mM |
| T17066 | 515-516 | CD | denotes | 2 |
| T17065 | 513-514 | , | denotes | , |
| T17064 | 510-513 | NNP | denotes | FCS |
| T17063 | 508-509 | NN | denotes | % |
| T17062 | 507-508 | CD | denotes | 1 |
| T17061 | 502-506 | IN | denotes | with |
| T17060 | 489-501 | VBN | denotes | supplemented |
| T17059 | 487-488 | -RRB- | denotes | ) |
| T17058 | 482-487 | NNP | denotes | Gibco |
| T17057 | 481-482 | -LRB- | denotes | ( |
| T17056 | 476-480 | CD | denotes | 1640 |
| T17055 | 471-475 | NNP | denotes | RPMI |
| T17054 | 468-470 | IN | denotes | in |
| T17053 | 459-467 | VBN | denotes | cultured |
| T17052 | 454-458 | VBD | denotes | were |
| T17051 | 442-453 | NNS | denotes | macrophages |
| T17050 | 433-441 | NNP | denotes | Alveolar |
| T17049 | 431-432 | . | denotes | . |
| T17048 | 427-431 | NNP | denotes | EDTA |
| T17047 | 424-426 | NNP | denotes | mM |
| T17046 | 422-423 | CD | denotes | 1 |
| T17045 | 411-421 | VBG | denotes | containing |
| T17044 | 406-410 | NNP | denotes | HBSS |
| T17043 | 401-405 | IN | denotes | with |
| T17042 | 395-400 | NNS | denotes | times |
| T17041 | 393-394 | CD | denotes | 4 |
| T17040 | 385-392 | VBN | denotes | flushed |
| T17039 | 381-384 | VBD | denotes | was |
| T17038 | 376-380 | NN | denotes | lung |
| T17037 | 372-375 | DT | denotes | the |
| T17036 | 368-371 | CC | denotes | and |
| T17035 | 358-367 | VBN | denotes | canulated |
| T17034 | 354-357 | VBD | denotes | was |
| T17033 | 346-353 | NN | denotes | trachea |
| T17032 | 342-345 | DT | denotes | the |
| T17031 | 340-341 | , | denotes | , |
| T17030 | 329-340 | NNS | denotes | macrophages |
| T17029 | 320-328 | JJ | denotes | alveolar |
| T17028 | 317-319 | IN | denotes | of |
| T17027 | 307-316 | NN | denotes | isolation |
| T17026 | 303-306 | DT | denotes | the |
| T17025 | 299-302 | IN | denotes | For |
| T17024 | 297-298 | . | denotes | . |
| T17023 | 287-297 | NNS | denotes | antibodies |
| T17022 | 278-286 | JJ | denotes | specific |
| T17021 | 272-277 | NNP | denotes | CD11b |
| T17020 | 268-271 | CC | denotes | and |
| T17019 | 262-267 | NNP | denotes | F4/80 |
| T17018 | 256-261 | VBG | denotes | using |
| T17017 | 246-255 | NN | denotes | cytometry |
| T17016 | 241-245 | NN | denotes | flow |
| T17015 | 238-240 | IN | denotes | by |
| T17014 | 229-237 | VBN | denotes | measured |
| T17013 | 226-228 | IN | denotes | as |
| T17012 | 219-225 | NN | denotes | purity |
| T17011 | 217-218 | NN | denotes | % |
| T17010 | 215-217 | CD | denotes | 95 |
| T17009 | 214-215 | CD | denotes | ≥ |
| T17008 | 211-213 | IN | denotes | of |
| T17007 | 206-210 | VBD | denotes | were |
| T17006 | 201-205 | NNP | denotes | BMDM |
| T17005 | 199-200 | . | denotes | . |
| T17004 | 194-199 | NNP | denotes | M-CSF |
| T17003 | 182-193 | JJ | denotes | recombinant |
| T17002 | 176-181 | JJ | denotes | ng/ml |
| T17001 | 173-175 | CD | denotes | 40 |
| T17000 | 169-172 | CC | denotes | and |
| T16999 | 157-168 | NNS | denotes | antibiotics |
| T16998 | 155-156 | , | denotes | , |
| T16997 | 147-155 | NN | denotes | pyruvate |
| T16996 | 140-146 | NN | denotes | sodium |
| T16995 | 137-139 | NNP | denotes | mM |
| T16994 | 133-136 | CD | denotes | 0.4 |
| T16993 | 131-132 | , | denotes | , |
| T16992 | 120-131 | NNP | denotes | L-glutamine |
| T16991 | 117-119 | NNP | denotes | mM |
| T16990 | 115-116 | CD | denotes | 2 |
| T16989 | 113-114 | , | denotes | , |
| T16988 | 110-113 | NNP | denotes | FCS |
| T16987 | 108-109 | NN | denotes | % |
| T16986 | 106-108 | CD | denotes | 10 |
| T16985 | 101-105 | IN | denotes | with |
| T16984 | 88-100 | VBN | denotes | supplemented |
| T16983 | 86-87 | -RRB- | denotes | ) |
| T16982 | 81-86 | NNP | denotes | Gibco |
| T16981 | 80-81 | -LRB- | denotes | ( |
| T16980 | 75-79 | CD | denotes | 1640 |
| T16979 | 70-74 | NNP | denotes | RPMI |
| T16978 | 67-69 | IN | denotes | in |
| T16977 | 62-66 | NNS | denotes | days |
| T16976 | 60-61 | CD | denotes | 7 |
| T16975 | 51-59 | VBN | denotes | cultured |
| T16974 | 46-50 | VBD | denotes | were |
| T16973 | 40-45 | NNS | denotes | cells |
| T16972 | 33-39 | NN | denotes | marrow |
| T16971 | 28-32 | NN | denotes | bone |
| T16970 | 26-27 | , | denotes | , |
| T16969 | 22-26 | NNP | denotes | BMDM |
| T16968 | 19-21 | IN | denotes | of |
| T16967 | 8-18 | NN | denotes | generation |
| T16966 | 4-7 | DT | denotes | the |
| T16965 | 0-3 | IN | denotes | For |
| R12813 | T16965 | T16975 | prep | For,cultured |
| R12814 | T16966 | T16967 | det | the,generation |
| R12815 | T16967 | T16965 | pobj | generation,For |
| R12816 | T16968 | T16967 | prep | of,generation |
| R12817 | T16969 | T16968 | pobj | BMDM,of |
| R12818 | T16970 | T16969 | punct | ",",BMDM |
| R12819 | T16971 | T16972 | compound | bone,marrow |
| R12820 | T16972 | T16973 | compound | marrow,cells |
| R12821 | T16973 | T16975 | nsubjpass | cells,cultured |
| R12822 | T16974 | T16975 | auxpass | were,cultured |
| R12823 | T16975 | T16975 | ROOT | cultured,cultured |
| R12824 | T16976 | T16977 | nummod | 7,days |
| R12825 | T16977 | T16975 | npadvmod | days,cultured |
| R12826 | T16978 | T16975 | prep | in,cultured |
| R12827 | T16979 | T16984 | nsubj | RPMI,supplemented |
| R12828 | T16980 | T16979 | nummod | 1640,RPMI |
| R12829 | T16981 | T16982 | punct | (,Gibco |
| R12830 | T16982 | T16979 | appos | Gibco,RPMI |
| R12831 | T16983 | T16979 | punct | ),RPMI |
| R12832 | T16984 | T16975 | conj | supplemented,cultured |
| R12833 | T16985 | T16984 | prep | with,supplemented |
| R12834 | T16986 | T16987 | nummod | 10,% |
| R12835 | T16987 | T16988 | compound | %,FCS |
| R12836 | T16988 | T16985 | pobj | FCS,with |
| R12837 | T16989 | T16988 | punct | ",",FCS |
| R12838 | T16990 | T16992 | nummod | 2,L-glutamine |
| R12839 | T16991 | T16992 | compound | mM,L-glutamine |
| R12840 | T16992 | T16988 | conj | L-glutamine,FCS |
| R12841 | T16993 | T16992 | punct | ",",L-glutamine |
| R12842 | T16994 | T16997 | nummod | 0.4,pyruvate |
| R12843 | T16995 | T16997 | compound | mM,pyruvate |
| R12844 | T16996 | T16997 | compound | sodium,pyruvate |
| R12845 | T16997 | T16992 | appos | pyruvate,L-glutamine |
| R12846 | T16998 | T16997 | punct | ",",pyruvate |
| R12847 | T16999 | T16997 | conj | antibiotics,pyruvate |
| R12848 | T17000 | T16999 | cc | and,antibiotics |
| R12849 | T17001 | T17004 | nummod | 40,M-CSF |
| R12850 | T17002 | T17003 | advmod | ng/ml,recombinant |
| R12851 | T17003 | T17004 | amod | recombinant,M-CSF |
| R12852 | T17004 | T16999 | conj | M-CSF,antibiotics |
| R12853 | T17005 | T16984 | punct | .,supplemented |
| R12854 | T17006 | T17007 | nsubj | BMDM,were |
| R12855 | T17007 | T17007 | ROOT | were,were |
| R12856 | T17008 | T17007 | prep | of,were |
| R12857 | T17009 | T17012 | nummod | ≥,purity |
| R12858 | T17010 | T17011 | nummod | 95,% |
| R12859 | T17011 | T17012 | compound | %,purity |
| R12860 | T17012 | T17008 | pobj | purity,of |
| R12861 | T17013 | T17014 | mark | as,measured |
| R12862 | T17014 | T17007 | advcl | measured,were |
| R12863 | T17015 | T17014 | agent | by,measured |
| R12864 | T17016 | T17017 | compound | flow,cytometry |
| R12865 | T17017 | T17015 | pobj | cytometry,by |
| R12866 | T17018 | T17014 | advcl | using,measured |
| R12867 | T17019 | T17023 | nmod | F4/80,antibodies |
| R12868 | T17020 | T17019 | cc | and,F4/80 |
| R12869 | T17021 | T17019 | conj | CD11b,F4/80 |
| R12870 | T17022 | T17023 | amod | specific,antibodies |
| R12871 | T17023 | T17018 | dobj | antibodies,using |
| R12872 | T17024 | T17007 | punct | .,were |
| R12873 | T17025 | T17034 | prep | For,was |
| R12874 | T17026 | T17027 | det | the,isolation |
| R12875 | T17027 | T17025 | pobj | isolation,For |
| R12876 | T17028 | T17027 | prep | of,isolation |
| R12877 | T17029 | T17030 | amod | alveolar,macrophages |
| R12878 | T17030 | T17028 | pobj | macrophages,of |
| R12879 | T17031 | T17034 | punct | ",",was |
| R12880 | T17032 | T17033 | det | the,trachea |
| R12881 | T17033 | T17034 | nsubj | trachea,was |
| R12882 | T17034 | T17034 | ROOT | was,was |
| R12883 | T17035 | T17034 | attr | canulated,was |
| R12884 | T17036 | T17035 | cc | and,canulated |
| R12885 | T17037 | T17038 | det | the,lung |
| R12886 | T17038 | T17040 | nsubjpass | lung,flushed |
| R12887 | T17039 | T17040 | auxpass | was,flushed |
| R12888 | T17040 | T17035 | conj | flushed,canulated |
| R12889 | T17041 | T17042 | nummod | 4,times |
| R12890 | T17042 | T17040 | npadvmod | times,flushed |
| R12891 | T17043 | T17040 | prep | with,flushed |
| R12892 | T17044 | T17043 | pobj | HBSS,with |
| R12893 | T17045 | T17040 | advcl | containing,flushed |
| R12894 | T17046 | T17048 | nummod | 1,EDTA |
| R12895 | T17047 | T17048 | compound | mM,EDTA |
| R12896 | T17048 | T17045 | dobj | EDTA,containing |
| R12897 | T17049 | T17034 | punct | .,was |
| R12898 | T17050 | T17051 | compound | Alveolar,macrophages |
| R12899 | T17051 | T17060 | nsubjpass | macrophages,supplemented |
| R12900 | T17052 | T17060 | ccomp | were,supplemented |
| R12901 | T17053 | T17052 | acomp | cultured,were |
| R12902 | T17054 | T17053 | prep | in,cultured |
| R12903 | T17055 | T17060 | nsubj | RPMI,supplemented |
| R12904 | T17056 | T17055 | nummod | 1640,RPMI |
| R12905 | T17057 | T17058 | punct | (,Gibco |
| R12906 | T17058 | T17055 | appos | Gibco,RPMI |
| R12907 | T17059 | T17060 | punct | ),supplemented |
| R12908 | T17060 | T17060 | ROOT | supplemented,supplemented |
| R12909 | T17061 | T17060 | prep | with,supplemented |
| R12910 | T17062 | T17063 | nummod | 1,% |
| R12911 | T17063 | T17064 | compound | %,FCS |
| R12914 | T17066 | T17068 | nummod | 2,L-glutamine |
| R12915 | T17067 | T17068 | compound | mM,L-glutamine |
| R12916 | T17068 | T17064 | conj | L-glutamine,FCS |
| R12917 | T17069 | T17068 | punct | ",",L-glutamine |
| R12918 | T17070 | T17073 | nummod | 0.4,pyruvate |
| R12919 | T17071 | T17073 | compound | mM,pyruvate |
| R12920 | T17072 | T17073 | compound | sodium,pyruvate |
| R12921 | T17073 | T17068 | appos | pyruvate,L-glutamine |
| R12922 | T17074 | T17073 | cc | and,pyruvate |
| R12923 | T17075 | T17073 | conj | antibiotics,pyruvate |
| R12924 | T17076 | T17060 | punct | .,supplemented |
| R12912 | T17064 | T17061 | pobj | FCS,with |
| R12913 | T17065 | T17064 | punct | ",",FCS |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17111 | 272-277 | Protein | denotes | CD11b |