> top > docs > PMC:3291650 > spans > 15270-15831 > annotations

PMC:3291650 / 15270-15831 JSONTXT

Annnotations TAB JSON ListView MergeView

test3

Id Subject Object Predicate Lexical cue
T7681 544-548 Protein denotes IFNβ
T7680 536-539 Protein denotes TNF
T7679 357-361 Protein denotes IFNβ
T7678 348-352 Protein denotes IL-6
T7677 334-344 Gene_expression denotes expression
T7676 325-333 Positive_regulation denotes enhanced
T7675 241-250 Negative_regulation denotes deficient
T7674 121-130 Negative_regulation denotes deficient
T7663 544-548 Protein denotes IFNβ
T7662 536-539 Protein denotes TNF
T7661 357-361 Protein denotes IFNβ
T7660 348-352 Protein denotes IL-6
R5394 T7677 T7676 themeOf expression,enhanced
R5395 T7678 T7677 themeOf IL-6,expression
R5396 T7679 T7677 themeOf IFNβ,expression

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7918 559-560 -RRB- denotes )
T7917 557-559 NN denotes 2B
T7916 550-556 NN denotes figure
T7915 549-550 -LRB- denotes (
T7914 544-548 NN denotes IFNβ
T7913 540-543 CC denotes and
T7912 536-539 NN denotes TNF
T7911 533-535 IN denotes of
T7910 526-532 NN denotes levels
T7909 519-525 JJ denotes higher
T7908 509-518 VB denotes contained
T7907 503-508 NN denotes cells
T7906 497-502 DT denotes these
T7905 492-496 IN denotes from
T7904 482-491 VB denotes collected
T7903 470-481 NN denotes supernatant
T7902 462-469 NN denotes culture
T7901 457-461 NN denotes cell
T7900 455-456 -COMMA- denotes ,
T7899 451-455 NN denotes data
T7898 445-450 DT denotes these
T7897 440-444 IN denotes with
T7896 429-439 NN denotes accordance
T7895 426-428 IN denotes In
T7894 423-424 -RRB- denotes )
T7893 421-423 NN denotes 2A
T7892 414-420 NN denotes figure
T7891 413-414 -LRB- denotes (
T7890 407-412 NN denotes cells
T7889 399-406 NN denotes control
T7888 396-398 TO denotes to
T7887 387-395 VB denotes compared
T7886 377-386 NN denotes infection
T7885 373-376 NN denotes IAV
T7884 367-372 IN denotes after
T7883 362-366 NN denotes mRNA
T7882 357-361 NN denotes IFNβ
T7881 353-356 CC denotes and
T7880 348-352 NN denotes IL-6
T7879 345-347 IN denotes of
T7878 334-344 NN denotes expression
T7877 325-333 VB denotes enhanced
T7876 320-324 VB denotes show
T7875 315-319 NN denotes BMDM
T7874 304-314 NN denotes A20myel-KO
T7873 302-303 -COMMA- denotes ,
T7872 291-302 RB denotes Furthermore
T7871 288-289 -RRB- denotes )
T7870 286-288 NN denotes 2A
T7869 279-285 NN denotes figure
T7868 278-279 -LRB- denotes (
T7867 268-277 NN denotes infection
T7866 262-267 JJ denotes viral
T7865 257-261 IN denotes upon
T7864 255-256 -COMMA- denotes ,
T7863 251-255 NN denotes BMDM
T7862 241-250 JJ denotes deficient
T7861 237-240 NN denotes A20
T7860 234-236 IN denotes in
T7859 230-233 RB denotes not
T7858 226-229 CC denotes but
T7857 224-225 -COMMA- denotes ,
T7856 220-224 NN denotes BMDM
T7855 215-219 NN denotes type
T7854 210-214 JJ denotes wild
T7853 207-209 IN denotes in
T7852 199-206 VB denotes induced
T7851 191-198 RB denotes rapidly
T7850 186-190 VB denotes were
T7849 179-185 NN denotes levels
T7848 174-178 NN denotes mRNA
T7847 170-173 NN denotes A20
T7846 167-168 -RRB- denotes )
T7845 163-167 NN denotes H3N2
T7844 162-163 -LRB- denotes (
T7843 157-161 NN denotes X-47
T7842 153-156 NN denotes IAV
T7841 148-152 IN denotes with
T7840 143-147 NN denotes BMDM
T7839 135-142 NN denotes control
T7838 131-134 CC denotes and
T7837 121-130 JJ denotes deficient
T7836 117-120 NN denotes A20
T7835 108-116 VB denotes infected
T7834 105-107 PRP denotes we
T7833 103-104 -COMMA- denotes ,
T7832 94-103 NN denotes responses
T7831 87-93 JJ denotes immune
T7830 80-86 JJ denotes innate
T7829 70-79 JJ denotes antiviral
T7828 66-69 CC denotes and
T7827 50-65 JJ denotes proinflammatory
T7826 38-49 JJ denotes IAV-induced
T7825 34-37 DT denotes the
T7824 31-33 IN denotes in
T7823 27-30 NN denotes A20
T7822 24-26 IN denotes of
T7821 19-23 NN denotes role
T7820 15-18 DT denotes the
T7819 3-14 VB denotes investigate
T7818 0-2 TO denotes To
R5456 T7819 T7818 arg1Of investigate,To
R5457 T7821 T7819 arg2Of role,investigate
R5458 T7821 T7820 arg1Of role,the
R5459 T7821 T7822 arg1Of role,of
R5460 T7821 T7824 arg1Of role,in
R5461 T7823 T7822 arg2Of A20,of
R5462 T7827 T7826 arg1Of proinflammatory,IAV-induced
R5463 T7827 T7828 arg1Of proinflammatory,and
R5464 T7831 T7828 arg2Of immune,and
R5465 T7831 T7829 arg1Of immune,antiviral
R5466 T7831 T7830 arg1Of immune,innate
R5467 T7832 T7824 arg2Of responses,in
R5468 T7832 T7825 arg1Of responses,the
R5469 T7832 T7827 arg1Of responses,proinflammatory
R5470 T7832 T7831 arg1Of responses,immune
R5471 T7834 T7819 arg1Of we,investigate
R5472 T7834 T7835 arg1Of we,infected
R5473 T7835 T7818 modOf infected,To
R5474 T7835 T7833 arg1Of infected,","
R5475 T7836 T7837 arg1Of A20,deficient
R5476 T7836 T7838 arg1Of A20,and
R5477 T7838 T7835 arg2Of and,infected
R5478 T7838 T7841 arg1Of and,with
R5479 T7840 T7838 arg2Of BMDM,and
R5480 T7840 T7839 arg1Of BMDM,control
R5481 T7843 T7841 arg2Of X-47,with
R5482 T7843 T7842 arg1Of X-47,IAV
R5483 T7843 T7844 arg1Of X-47,(
R5484 T7845 T7844 arg2Of H3N2,(
R5485 T7846 T7844 arg3Of ),(
R5486 T7849 T7847 arg1Of levels,A20
R5487 T7849 T7848 arg1Of levels,mRNA
R5488 T7849 T7850 arg1Of levels,were
R5489 T7849 T7852 arg2Of levels,induced
R5490 T7852 T7850 arg2Of induced,were
R5491 T7852 T7851 arg1Of induced,rapidly
R5492 T7852 T7853 arg1Of induced,in
R5493 T7852 T7860 arg1Of induced,in
R5494 T7852 T7864 arg1Of induced,","
R5495 T7852 T7865 arg1Of induced,upon
R5496 T7853 T7858 arg1Of in,but
R5497 T7856 T7853 arg2Of BMDM,in
R5498 T7856 T7854 arg1Of BMDM,wild
R5499 T7856 T7855 arg1Of BMDM,type
R5500 T7858 T7857 arg1Of but,","
R5501 T7860 T7858 arg2Of in,but
R5502 T7860 T7859 arg1Of in,not
R5503 T7863 T7860 arg2Of BMDM,in
R5504 T7863 T7861 arg1Of BMDM,A20
R5505 T7863 T7862 arg1Of BMDM,deficient
R5506 T7867 T7865 arg2Of infection,upon
R5507 T7867 T7866 arg1Of infection,viral
R5508 T7867 T7868 arg1Of infection,(
R5509 T7870 T7868 arg2Of 2A,(
R5510 T7870 T7869 arg1Of 2A,figure
R5511 T7871 T7868 arg3Of ),(
R5512 T7875 T7874 arg1Of BMDM,A20myel-KO
R5513 T7875 T7876 arg1Of BMDM,show
R5514 T7876 T7872 arg1Of show,Furthermore
R5515 T7876 T7873 arg1Of show,","
R5516 T7876 T7887 arg1Of show,compared
R5517 T7878 T7876 arg2Of expression,show
R5518 T7878 T7877 arg2Of expression,enhanced
R5519 T7878 T7879 arg1Of expression,of
R5520 T7878 T7884 arg1Of expression,after
R5521 T7880 T7881 arg1Of IL-6,and
R5522 T7882 T7881 arg2Of IFNβ,and
R5523 T7883 T7879 arg2Of mRNA,of
R5524 T7883 T7880 arg1Of mRNA,IL-6
R5525 T7883 T7882 arg1Of mRNA,IFNβ
R5526 T7886 T7884 arg2Of infection,after
R5527 T7886 T7885 arg1Of infection,IAV
R5528 T7888 T7887 arg2Of to,compared
R5529 T7890 T7888 arg2Of cells,to
R5530 T7890 T7889 arg1Of cells,control
R5531 T7890 T7891 arg1Of cells,(
R5532 T7893 T7891 arg2Of 2A,(
R5533 T7893 T7892 arg1Of 2A,figure
R5534 T7894 T7891 arg3Of ),(
R5535 T7896 T7895 arg2Of accordance,In
R5536 T7896 T7897 arg1Of accordance,with
R5537 T7899 T7897 arg2Of data,with
R5538 T7899 T7898 arg1Of data,these
R5539 T7903 T7901 arg1Of supernatant,cell
R5540 T7903 T7902 arg1Of supernatant,culture
R5541 T7903 T7904 arg2Of supernatant,collected
R5542 T7903 T7908 arg1Of supernatant,contained
R5543 T7904 T7905 arg1Of collected,from
R5544 T7907 T7905 arg2Of cells,from
R5545 T7907 T7906 arg1Of cells,these
R5546 T7908 T7895 arg1Of contained,In
R5547 T7908 T7900 arg1Of contained,","
R5548 T7910 T7908 arg2Of levels,contained
R5549 T7910 T7909 arg1Of levels,higher
R5550 T7910 T7911 arg1Of levels,of
R5551 T7912 T7913 arg1Of TNF,and
R5552 T7913 T7911 arg2Of and,of
R5553 T7913 T7915 arg1Of and,(
R5554 T7914 T7913 arg2Of IFNβ,and
R5555 T7917 T7915 arg2Of 2B,(
R5556 T7917 T7916 arg1Of 2B,figure
R5557 T7918 T7915 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7757 544-548 Protein denotes IFNβ
T7756 536-539 Protein denotes TNF
T7755 357-361 Protein denotes IFNβ
T7754 348-352 Protein denotes IL-6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8353 536-539 http://www.uniprot.org/uniprot/P01375 denotes TNF
T8351 348-352 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T8346 237-240 http://www.uniprot.org/uniprot/P21580 denotes A20
T8345 170-173 http://www.uniprot.org/uniprot/P21580 denotes A20
T8344 117-120 http://www.uniprot.org/uniprot/P21580 denotes A20
T8343 27-30 http://www.uniprot.org/uniprot/P21580 denotes A20

GO-BP

Id Subject Object Predicate Lexical cue
T7779 262-277 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T7778 87-103 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T7777 80-103 http://purl.obolibrary.org/obo/GO_0045824 denotes innate immune responses
T7776 80-103 http://purl.obolibrary.org/obo/GO_0045089 denotes innate immune responses
T7775 80-103 http://purl.obolibrary.org/obo/GO_0002218 denotes innate immune responses
T7774 80-103 http://purl.obolibrary.org/obo/GO_0045088 denotes innate immune responses
T7773 80-103 http://purl.obolibrary.org/obo/GO_0002227 denotes innate immune responses
T7772 80-103 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune responses
T7771 80-93 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune

GO-MF

Id Subject Object Predicate Lexical cue
T7786 348-352 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

GO-CC

Id Subject Object Predicate Lexical cue
T7790 503-508 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T7789 407-412 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T7702 426-561 Sentence denotes In accordance with these data, cell culture supernatant collected from these cells contained higher levels of TNF and IFNβ (figure 2B).
T7701 291-425 Sentence denotes Furthermore, A20myel-KO BMDM show enhanced expression of IL-6 and IFNβ mRNA after IAV infection compared to control cells (figure 2A).
T7700 170-290 Sentence denotes A20 mRNA levels were rapidly induced in wild type BMDM, but not in A20 deficient BMDM, upon viral infection (figure 2A).
T7699 0-169 Sentence denotes To investigate the role of A20 in the IAV-induced proinflammatory and antiviral innate immune responses, we infected A20 deficient and control BMDM with IAV X-47 (H3N2).
T94 0-169 Sentence denotes To investigate the role of A20 in the IAV-induced proinflammatory and antiviral innate immune responses, we infected A20 deficient and control BMDM with IAV X-47 (H3N2).
T95 170-290 Sentence denotes A20 mRNA levels were rapidly induced in wild type BMDM, but not in A20 deficient BMDM, upon viral infection (figure 2A).
T96 291-425 Sentence denotes Furthermore, A20myel-KO BMDM show enhanced expression of IL-6 and IFNβ mRNA after IAV infection compared to control cells (figure 2A).
T97 426-561 Sentence denotes In accordance with these data, cell culture supernatant collected from these cells contained higher levels of TNF and IFNβ (figure 2B).

ICD10

Id Subject Object Predicate Lexical cue
T7785 262-277 http://purl.bioontology.org/ontology/ICD10/B34.9 denotes viral infection

simple1

Id Subject Object Predicate Lexical cue
T7799 544-548 Protein denotes IFNβ
T7798 536-539 Protein denotes TNF
T7797 357-361 Protein denotes IFNβ
T7796 348-352 Protein denotes IL-6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T8505 526-532 Positive_regulation denotes levels
T8504 325-333 Positive_regulation denotes enhanced
T8503 334-344 Gene_expression denotes expression
T8492 544-548 Protein denotes IFNβ
T8491 536-539 Protein denotes TNF
T8490 357-361 Protein denotes IFNβ
T8489 348-352 Protein denotes IL-6
R6052 T8489 T8503 themeOf IL-6,expression
R6053 T8490 T8503 themeOf IFNβ,expression
R6054 T8491 T8505 themeOf TNF,levels
R6073 T8503 T8504 themeOf expression,enhanced
R6074 T8503 T8504 themeOf expression,enhanced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8371 325-333 Positive_regulation denotes enhanced
T8370 334-344 Gene_expression denotes expression
T8359 544-548 Protein denotes IFNβ
T8358 536-539 Protein denotes TNF
T8357 357-361 Protein denotes IFNβ
T8356 348-352 Protein denotes IL-6
R5969 T8356 T8370 themeOf IL-6,expression
R5970 T8357 T8370 themeOf IFNβ,expression
R5984 T8370 T8371 themeOf expression,enhanced
R5985 T8370 T8371 themeOf expression,enhanced

DLUT931

Id Subject Object Predicate Lexical cue
T8391 519-525 Positive_regulation denotes higher
T8390 325-333 Positive_regulation denotes enhanced
T8389 334-344 Gene_expression denotes expression
T8378 544-548 Protein denotes IFNβ
T8377 536-539 Protein denotes TNF
T8376 357-361 Protein denotes IFNβ
T8375 348-352 Protein denotes IL-6
R5986 T8375 T8389 themeOf IL-6,expression
R5987 T8376 T8389 themeOf IFNβ,expression
R5988 T8377 T8391 themeOf TNF,higher
R5989 T8378 T8391 themeOf IFNβ,higher
R6005 T8389 T8390 themeOf expression,enhanced
R6006 T8389 T8390 themeOf expression,enhanced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8527 70-104 Entity denotes antiviral innate immune responses,
T8520 237-250 Protein denotes A20 deficient
T8519 396-424 Entity denotes to control cells (figure 2A)
T8516 117-130 Protein denotes A20 deficient
T8510 536-539 Protein denotes TNF
T8557 334-366 Gene_expression denotes expression of IL-6 and IFNβ mRNA
T8556 334-366 Gene_expression denotes expression of IL-6 and IFNβ mRNA
T8550 357-361 Protein denotes IFNβ
T8545 170-173 Protein denotes A20
T8543 544-560 Protein denotes IFNβ (figure 2B)
T8539 24-49 Protein denotes of A20 in the IAV-induced
T8538 497-508 Entity denotes these cells
T8536 357-366 Protein denotes IFNβ mRNA
T8532 348-352 Protein denotes IL-6
T8530 163-167 Entity denotes H3N2
R6080 T8532 T8557 themeOf IL-6,expression of IL-6 and IFNβ mRNA
R6082 T8536 T8556 themeOf IFNβ mRNA,expression of IL-6 and IFNβ mRNA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8191 560-561 . denotes .
T8190 559-560 -RRB- denotes )
T8189 557-559 NN denotes 2B
T8188 550-556 NN denotes figure
T8187 549-550 -LRB- denotes (
T8186 544-548 NNP denotes IFNβ
T8185 540-543 CC denotes and
T8184 536-539 NNP denotes TNF
T8183 533-535 IN denotes of
T8182 526-532 NNS denotes levels
T8181 519-525 JJR denotes higher
T8180 509-518 VBD denotes contained
T8179 503-508 NNS denotes cells
T8178 497-502 DT denotes these
T8177 492-496 IN denotes from
T8176 482-491 VBN denotes collected
T8175 470-481 JJ denotes supernatant
T8174 462-469 NN denotes culture
T8173 457-461 NN denotes cell
T8172 455-456 , denotes ,
T8171 451-455 NNS denotes data
T8170 445-450 DT denotes these
T8169 440-444 IN denotes with
T8168 429-439 NN denotes accordance
T8167 426-428 IN denotes In
T8166 424-425 . denotes .
T8165 423-424 -RRB- denotes )
T8164 421-423 NN denotes 2A
T8163 414-420 NN denotes figure
T8162 413-414 -LRB- denotes (
T8161 407-412 NNS denotes cells
T8160 399-406 VB denotes control
T8159 396-398 TO denotes to
T8158 387-395 VBN denotes compared
T8157 377-386 NN denotes infection
T8156 373-376 NNP denotes IAV
T8155 367-372 IN denotes after
T8154 362-366 NNP denotes mRNA
T8153 357-361 NNP denotes IFNβ
T8152 353-356 CC denotes and
T8151 348-352 NNP denotes IL-6
T8150 345-347 IN denotes of
T8149 334-344 NN denotes expression
T8148 325-333 JJ denotes enhanced
T8147 320-324 NN denotes show
T8146 315-319 NNP denotes BMDM
T8145 304-314 JJ denotes A20myel-KO
T8144 302-303 , denotes ,
T8143 291-302 RB denotes Furthermore
T8142 289-290 . denotes .
T8141 288-289 -RRB- denotes )
T8140 286-288 NN denotes 2A
T8139 279-285 NN denotes figure
T8138 278-279 -LRB- denotes (
T8137 268-277 NN denotes infection
T8136 262-267 JJ denotes viral
T8135 257-261 IN denotes upon
T8134 255-256 , denotes ,
T8133 251-255 NNP denotes BMDM
T8132 241-250 JJ denotes deficient
T8131 237-240 CD denotes A20
T8130 234-236 IN denotes in
T8129 230-233 RB denotes not
T8128 226-229 CC denotes but
T8127 224-225 , denotes ,
T8126 220-224 NNP denotes BMDM
T8125 215-219 NN denotes type
T8124 210-214 JJ denotes wild
T8123 207-209 IN denotes in
T8122 199-206 VBN denotes induced
T8121 191-198 RB denotes rapidly
T8120 186-190 VBD denotes were
T8119 179-185 NNS denotes levels
T8118 174-178 NNP denotes mRNA
T8117 170-173 CD denotes A20
T8116 168-169 . denotes .
T8115 167-168 -RRB- denotes )
T8114 163-167 NNP denotes H3N2
T8113 162-163 -LRB- denotes (
T8112 157-161 NNP denotes X-47
T8111 153-156 NNP denotes IAV
T8110 148-152 IN denotes with
T8109 143-147 NNP denotes BMDM
T8108 135-142 NN denotes control
T8107 131-134 CC denotes and
T8106 121-130 NN denotes deficient
T8105 117-120 NNP denotes A20
T8104 108-116 VBD denotes infected
T8103 105-107 PRP denotes we
T8102 103-104 , denotes ,
T8101 94-103 NNS denotes responses
T8100 87-93 JJ denotes immune
T8099 80-86 NN denotes innate
T8098 70-79 JJ denotes antiviral
T8097 66-69 CC denotes and
T8096 50-65 JJ denotes proinflammatory
T8095 38-49 JJ denotes IAV-induced
T8094 34-37 DT denotes the
T8093 31-33 IN denotes in
T8092 27-30 NNP denotes A20
T8091 24-26 IN denotes of
T8090 19-23 NN denotes role
T8089 15-18 DT denotes the
T8088 3-14 VB denotes investigate
T8087 0-2 TO denotes To
R5714 T8087 T8088 aux To,investigate
R5716 T8089 T8090 det the,role
R5717 T8090 T8088 dobj role,investigate
R5718 T8091 T8090 prep of,role
R5719 T8092 T8091 pobj A20,of
R5720 T8093 T8090 prep in,role
R5721 T8094 T8101 det the,responses
R5722 T8095 T8101 amod IAV-induced,responses
R5723 T8096 T8095 conj proinflammatory,IAV-induced
R5724 T8097 T8096 cc and,proinflammatory
R5725 T8098 T8096 conj antiviral,proinflammatory
R5726 T8099 T8101 amod innate,responses
R5727 T8100 T8101 amod immune,responses
R5728 T8101 T8093 pobj responses,in
R5729 T8102 T8104 punct ",",infected
R5730 T8103 T8104 nsubj we,infected
R5731 T8104 T8104 ROOT infected,infected
R5732 T8105 T8106 compound A20,deficient
R5733 T8106 T8109 nmod deficient,BMDM
R5734 T8107 T8106 cc and,deficient
R5735 T8108 T8106 conj control,deficient
R5736 T8109 T8104 dobj BMDM,infected
R5737 T8110 T8104 prep with,infected
R5738 T8111 T8112 compound IAV,X-47
R5739 T8112 T8110 pobj X-47,with
R5740 T8113 T8112 punct (,X-47
R5741 T8114 T8112 appos H3N2,X-47
R5742 T8115 T8112 punct ),X-47
R5743 T8116 T8104 punct .,infected
R5744 T8117 T8119 nummod A20,levels
R5745 T8118 T8119 compound mRNA,levels
R5746 T8119 T8122 nsubjpass levels,induced
R5747 T8120 T8122 auxpass were,induced
R5748 T8121 T8122 advmod rapidly,induced
R5749 T8122 T8122 ROOT induced,induced
R5750 T8123 T8122 prep in,induced
R5751 T8124 T8125 amod wild,type
R5752 T8125 T8126 compound type,BMDM
R5753 T8126 T8123 pobj BMDM,in
R5754 T8127 T8122 punct ",",induced
R5755 T8128 T8122 cc but,induced
R5756 T8129 T8130 neg not,in
R5757 T8130 T8122 conj in,induced
R5758 T8131 T8130 pobj A20,in
R5759 T8132 T8133 amod deficient,BMDM
R5760 T8133 T8130 conj BMDM,in
R5761 T8134 T8135 punct ",",upon
R5762 T8135 T8133 prep upon,BMDM
R5763 T8136 T8137 amod viral,infection
R5764 T8137 T8135 pobj infection,upon
R5765 T8138 T8140 punct (,2A
R5766 T8139 T8140 compound figure,2A
R5767 T8140 T8137 appos 2A,infection
R5768 T8141 T8140 punct ),2A
R5769 T8142 T8122 punct .,induced
R5770 T8143 T8147 advmod Furthermore,show
R5771 T8144 T8147 punct ",",show
R5772 T8145 T8147 compound A20myel-KO,show
R5773 T8146 T8147 compound BMDM,show
R5774 T8147 T8147 ROOT show,show
R5775 T8148 T8149 amod enhanced,expression
R5776 T8149 T8147 dobj expression,show
R5777 T8150 T8149 prep of,expression
R5778 T8151 T8150 pobj IL-6,of
R5779 T8152 T8151 cc and,IL-6
R5780 T8153 T8154 compound IFNβ,mRNA
R5781 T8154 T8147 appos mRNA,show
R5782 T8155 T8158 mark after,compared
R5783 T8156 T8157 compound IAV,infection
R5784 T8157 T8158 nsubj infection,compared
R5785 T8158 T8147 advcl compared,show
R5786 T8159 T8160 aux to,control
R5787 T8160 T8158 xcomp control,compared
R5788 T8161 T8160 dobj cells,control
R5789 T8162 T8161 punct (,cells
R5790 T8163 T8164 compound figure,2A
R5791 T8164 T8161 appos 2A,cells
R5792 T8165 T8161 punct ),cells
R5793 T8166 T8147 punct .,show
R5794 T8167 T8180 prep In,contained
R5795 T8168 T8167 pobj accordance,In
R5796 T8169 T8168 prep with,accordance
R5797 T8170 T8171 det these,data
R5798 T8171 T8169 pobj data,with
R5799 T8172 T8180 punct ",",contained
R5800 T8173 T8174 compound cell,culture
R5801 T8174 T8175 compound culture,supernatant
R5802 T8175 T8180 nsubj supernatant,contained
R5803 T8176 T8175 acl collected,supernatant
R5804 T8177 T8176 prep from,collected
R5805 T8178 T8179 det these,cells
R5806 T8179 T8177 pobj cells,from
R5807 T8180 T8180 ROOT contained,contained
R5808 T8181 T8182 amod higher,levels
R5809 T8182 T8180 dobj levels,contained
R5810 T8183 T8182 prep of,levels
R5811 T8184 T8183 pobj TNF,of
R5812 T8185 T8184 cc and,TNF
R5813 T8186 T8184 conj IFNβ,TNF
R5814 T8187 T8189 punct (,2B
R5815 T8188 T8189 compound figure,2B
R5816 T8189 T8186 appos 2B,IFNβ
R5817 T8190 T8186 punct ),IFNβ
R5818 T8191 T8180 punct .,contained

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8427 544-548 Protein denotes IFNβ
T8426 536-539 Protein denotes TNF
T8425 325-333 Positive_regulation denotes enhanced
T8424 325-333 Positive_regulation denotes enhanced
T8423 334-344 Gene_expression denotes expression
T8422 334-344 Gene_expression denotes expression
T8421 357-361 Protein denotes IFNβ
T8420 348-352 Protein denotes IL-6
T8419 199-206 Positive_regulation denotes induced
T8418 170-178 Protein denotes A20 mRNA
T8417 27-30 Protein denotes A20
R6015 T8418 T8419 themeOf A20 mRNA,induced
R6016 T8420 T8422 themeOf IL-6,expression
R6017 T8421 T8423 themeOf IFNβ,expression
R6018 T8422 T8424 themeOf expression,enhanced
R6019 T8423 T8425 themeOf expression,enhanced

testone

Id Subject Object Predicate Lexical cue
T7656 334-344 Gene_expression denotes expression
T7655 325-333 Positive_regulation denotes enhanced
T7654 241-250 Negative_regulation denotes deficient
T7653 199-206 Positive_regulation denotes induced
T7652 121-130 Negative_regulation denotes deficient
T7641 544-548 Protein denotes IFNβ
T7640 536-539 Protein denotes TNF
T7639 357-361 Protein denotes IFNβ
T7638 348-352 Protein denotes IL-6
R5381 T7638 T7656 themeOf IL-6,expression
R5382 T7639 T7656 themeOf IFNβ,expression
R5393 T7656 T7655 themeOf expression,enhanced