PMC:329117 / 17402-17629 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/329117","sourcedb":"PMC","sourceid":"329117","source_url":"http://www.ncbi.nlm.nih.gov/pmc/329117","text":" In these assays, we measure transcript level per genomic copy of the gene by comparing how well a gene-specific primer pair amplifies reverse-transcribed RNA, relative to a standard curve of amplification of mouse genomic DNA.","tracks":[{"project":"craft-sa-dev","denotations":[{"id":"T4947","span":{"begin":0,"end":227},"obj":"sentence"},{"id":"T4948","span":{"begin":1,"end":3},"obj":"IN"},{"id":"T4949","span":{"begin":21,"end":28},"obj":"VBP"},{"id":"T4950","span":{"begin":4,"end":9},"obj":"DT"},{"id":"T4951","span":{"begin":10,"end":16},"obj":"NNS"},{"id":"T4952","span":{"begin":16,"end":18},"obj":","},{"id":"T4953","span":{"begin":18,"end":20},"obj":"PRP"},{"id":"T4954","span":{"begin":29,"end":39},"obj":"NN"},{"id":"T4955","span":{"begin":40,"end":45},"obj":"NN"},{"id":"T4956","span":{"begin":46,"end":49},"obj":"IN"},{"id":"T4957","span":{"begin":50,"end":57},"obj":"JJ"},{"id":"T4958","span":{"begin":58,"end":62},"obj":"NN"},{"id":"T4959","span":{"begin":63,"end":65},"obj":"IN"},{"id":"T4960","span":{"begin":66,"end":69},"obj":"DT"},{"id":"T4961","span":{"begin":70,"end":74},"obj":"NN"},{"id":"T4962","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T4963","span":{"begin":78,"end":87},"obj":"VBG"},{"id":"T4964","span":{"begin":88,"end":91},"obj":"WRB"},{"id":"T4965","span":{"begin":92,"end":96},"obj":"RB"},{"id":"T4966","span":{"begin":125,"end":134},"obj":"VBZ"},{"id":"T4967","span":{"begin":97,"end":98},"obj":"DT"},{"id":"T4968","span":{"begin":120,"end":124},"obj":"NN"},{"id":"T4969","span":{"begin":99,"end":103},"obj":"NN"},{"id":"T4970","span":{"begin":104,"end":112},"obj":"JJ"},{"id":"T4971","span":{"begin":103,"end":104},"obj":"HYPH"},{"id":"T4972","span":{"begin":113,"end":119},"obj":"NN"},{"id":"T4973","span":{"begin":135,"end":142},"obj":"JJ"},{"id":"T4974","span":{"begin":143,"end":154},"obj":"VBN"},{"id":"T4975","span":{"begin":142,"end":143},"obj":"HYPH"},{"id":"T4976","span":{"begin":155,"end":158},"obj":"NN"},{"id":"T4977","span":{"begin":158,"end":160},"obj":","},{"id":"T4978","span":{"begin":160,"end":168},"obj":"JJ"},{"id":"T4979","span":{"begin":169,"end":171},"obj":"IN"},{"id":"T4980","span":{"begin":172,"end":173},"obj":"DT"},{"id":"T4981","span":{"begin":183,"end":188},"obj":"NN"},{"id":"T4982","span":{"begin":174,"end":182},"obj":"JJ"},{"id":"T4983","span":{"begin":189,"end":191},"obj":"IN"},{"id":"T4984","span":{"begin":192,"end":205},"obj":"NN"},{"id":"T4985","span":{"begin":206,"end":208},"obj":"IN"},{"id":"T4986","span":{"begin":209,"end":214},"obj":"NN"},{"id":"T4987","span":{"begin":223,"end":226},"obj":"NN"},{"id":"T4988","span":{"begin":215,"end":222},"obj":"JJ"},{"id":"T4989","span":{"begin":226,"end":227},"obj":"."}],"relations":[{"id":"R2898","pred":"prep","subj":"T4948","obj":"T4949"},{"id":"R2899","pred":"det","subj":"T4950","obj":"T4951"},{"id":"R2900","pred":"pobj","subj":"T4951","obj":"T4948"},{"id":"R2901","pred":"punct","subj":"T4952","obj":"T4949"},{"id":"R2902","pred":"nsubj","subj":"T4953","obj":"T4949"},{"id":"R2903","pred":"compound","subj":"T4954","obj":"T4955"},{"id":"R2904","pred":"dobj","subj":"T4955","obj":"T4949"},{"id":"R2905","pred":"prep","subj":"T4956","obj":"T4955"},{"id":"R2906","pred":"amod","subj":"T4957","obj":"T4958"},{"id":"R2907","pred":"pobj","subj":"T4958","obj":"T4956"},{"id":"R2908","pred":"prep","subj":"T4959","obj":"T4958"},{"id":"R2909","pred":"det","subj":"T4960","obj":"T4961"},{"id":"R2910","pred":"pobj","subj":"T4961","obj":"T4959"},{"id":"R2911","pred":"prep","subj":"T4962","obj":"T4949"},{"id":"R2912","pred":"pcomp","subj":"T4963","obj":"T4962"},{"id":"R2913","pred":"advmod","subj":"T4964","obj":"T4965"},{"id":"R2914","pred":"advmod","subj":"T4965","obj":"T4966"},{"id":"R2915","pred":"ccomp","subj":"T4966","obj":"T4963"},{"id":"R2916","pred":"det","subj":"T4967","obj":"T4968"},{"id":"R2917","pred":"nsubj","subj":"T4968","obj":"T4966"},{"id":"R2918","pred":"npadvmod","subj":"T4969","obj":"T4970"},{"id":"R2919","pred":"amod","subj":"T4970","obj":"T4968"},{"id":"R2920","pred":"punct","subj":"T4971","obj":"T4970"},{"id":"R2921","pred":"compound","subj":"T4972","obj":"T4968"},{"id":"R2922","pred":"amod","subj":"T4973","obj":"T4974"},{"id":"R2923","pred":"amod","subj":"T4974","obj":"T4976"},{"id":"R2924","pred":"punct","subj":"T4975","obj":"T4974"},{"id":"R2925","pred":"dobj","subj":"T4976","obj":"T4966"},{"id":"R2926","pred":"punct","subj":"T4977","obj":"T4963"},{"id":"R2927","pred":"advcl","subj":"T4978","obj":"T4963"},{"id":"R2928","pred":"prep","subj":"T4979","obj":"T4978"},{"id":"R2929","pred":"det","subj":"T4980","obj":"T4981"},{"id":"R2930","pred":"pobj","subj":"T4981","obj":"T4979"},{"id":"R2931","pred":"amod","subj":"T4982","obj":"T4981"},{"id":"R2932","pred":"prep","subj":"T4983","obj":"T4981"},{"id":"R2933","pred":"pobj","subj":"T4984","obj":"T4983"},{"id":"R2934","pred":"prep","subj":"T4985","obj":"T4984"},{"id":"R2935","pred":"nmod","subj":"T4986","obj":"T4987"},{"id":"R2936","pred":"pobj","subj":"T4987","obj":"T4985"},{"id":"R2937","pred":"amod","subj":"T4988","obj":"T4987"},{"id":"R2938","pred":"punct","subj":"T4989","obj":"T4949"}],"attributes":[{"subj":"T4947","pred":"source","obj":"craft-sa-dev"},{"subj":"T4948","pred":"source","obj":"craft-sa-dev"},{"subj":"T4949","pred":"source","obj":"craft-sa-dev"},{"subj":"T4950","pred":"source","obj":"craft-sa-dev"},{"subj":"T4951","pred":"source","obj":"craft-sa-dev"},{"subj":"T4952","pred":"source","obj":"craft-sa-dev"},{"subj":"T4953","pred":"source","obj":"craft-sa-dev"},{"subj":"T4954","pred":"source","obj":"craft-sa-dev"},{"subj":"T4955","pred":"source","obj":"craft-sa-dev"},{"subj":"T4956","pred":"source","obj":"craft-sa-dev"},{"subj":"T4957","pred":"source","obj":"craft-sa-dev"},{"subj":"T4958","pred":"source","obj":"craft-sa-dev"},{"subj":"T4959","pred":"source","obj":"craft-sa-dev"},{"subj":"T4960","pred":"source","obj":"craft-sa-dev"},{"subj":"T4961","pred":"source","obj":"craft-sa-dev"},{"subj":"T4962","pred":"source","obj":"craft-sa-dev"},{"subj":"T4963","pred":"source","obj":"craft-sa-dev"},{"subj":"T4964","pred":"source","obj":"craft-sa-dev"},{"subj":"T4965","pred":"source","obj":"craft-sa-dev"},{"subj":"T4966","pred":"source","obj":"craft-sa-dev"},{"subj":"T4967","pred":"source","obj":"craft-sa-dev"},{"subj":"T4968","pred":"source","obj":"craft-sa-dev"},{"subj":"T4969","pred":"source","obj":"craft-sa-dev"},{"subj":"T4970","pred":"source","obj":"craft-sa-dev"},{"subj":"T4971","pred":"source","obj":"craft-sa-dev"},{"subj":"T4972","pred":"source","obj":"craft-sa-dev"},{"subj":"T4973","pred":"source","obj":"craft-sa-dev"},{"subj":"T4974","pred":"source","obj":"craft-sa-dev"},{"subj":"T4975","pred":"source","obj":"craft-sa-dev"},{"subj":"T4976","pred":"source","obj":"craft-sa-dev"},{"subj":"T4977","pred":"source","obj":"craft-sa-dev"},{"subj":"T4978","pred":"source","obj":"craft-sa-dev"},{"subj":"T4979","pred":"source","obj":"craft-sa-dev"},{"subj":"T4980","pred":"source","obj":"craft-sa-dev"},{"subj":"T4981","pred":"source","obj":"craft-sa-dev"},{"subj":"T4982","pred":"source","obj":"craft-sa-dev"},{"subj":"T4983","pred":"source","obj":"craft-sa-dev"},{"subj":"T4984","pred":"source","obj":"craft-sa-dev"},{"subj":"T4985","pred":"source","obj":"craft-sa-dev"},{"subj":"T4986","pred":"source","obj":"craft-sa-dev"},{"subj":"T4987","pred":"source","obj":"craft-sa-dev"},{"subj":"T4988","pred":"source","obj":"craft-sa-dev"},{"subj":"T4989","pred":"source","obj":"craft-sa-dev"}]},{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T4512","span":{"begin":29,"end":39},"obj":"SO_EXT:0000673"},{"id":"T4513","span":{"begin":50,"end":57},"obj":"SO_EXT:0001026"},{"id":"T4514","span":{"begin":58,"end":62},"obj":"SO_EXT:sequence_copy_entity"},{"id":"T4515","span":{"begin":70,"end":74},"obj":"SO_EXT:0000704"},{"id":"T4516","span":{"begin":99,"end":103},"obj":"SO_EXT:0000704"},{"id":"T4517","span":{"begin":113,"end":119},"obj":"SO_EXT:0000112"},{"id":"T4518","span":{"begin":135,"end":154},"obj":"GO:0001171"},{"id":"T4519","span":{"begin":155,"end":158},"obj":"CHEBI_SO_EXT:RNA"},{"id":"T4520","span":{"begin":192,"end":208},"obj":"_FRAGMENT"},{"id":"T4521","span":{"begin":223,"end":226},"obj":"GO:0006277"},{"id":"T4522","span":{"begin":209,"end":214},"obj":"NCBITaxon:10088"},{"id":"T4523","span":{"begin":215,"end":226},"obj":"SO_EXT:genomic_DNA"},{"id":"T4524","span":{"begin":223,"end":226},"obj":"CHEBI_SO_EXT:DNA"}],"relations":[{"id":"R2587","pred":"_lexicallyChainedTo","subj":"T4521","obj":"T4520"}],"attributes":[{"subj":"T4512","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4513","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4514","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4515","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4516","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4517","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4518","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4519","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4520","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4521","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4522","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4523","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T4524","pred":"source","obj":"craft-ca-core-ex-dev"}]},{"project":"craft-ca-core-dev","denotations":[{"id":"T4364","span":{"begin":29,"end":39},"obj":"SO:0000673"},{"id":"T4365","span":{"begin":50,"end":57},"obj":"SO:0001026"},{"id":"T4366","span":{"begin":70,"end":74},"obj":"SO:0000704"},{"id":"T4367","span":{"begin":99,"end":103},"obj":"SO:0000704"},{"id":"T4368","span":{"begin":113,"end":119},"obj":"SO:0000112"},{"id":"T4369","span":{"begin":135,"end":154},"obj":"GO:0001171"},{"id":"T4370","span":{"begin":192,"end":208},"obj":"_FRAGMENT"},{"id":"T4371","span":{"begin":223,"end":226},"obj":"GO:0006277"},{"id":"T4372","span":{"begin":209,"end":214},"obj":"NCBITaxon:10088"},{"id":"T4373","span":{"begin":215,"end":222},"obj":"SO:0001026"}],"relations":[{"id":"R2586","pred":"_lexicallyChainedTo","subj":"T4371","obj":"T4370"}],"attributes":[{"subj":"T4364","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4365","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4366","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4367","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4368","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4369","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4370","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4371","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4372","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T4373","pred":"source","obj":"craft-ca-core-dev"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"craft-sa-dev","color":"#9eec93","default":true},{"id":"craft-ca-core-ex-dev","color":"#ec93b8"},{"id":"craft-ca-core-dev","color":"#93d2ec"}]}]}}