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PMC:3279418 / 947-1140 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T539 5-6 -LRB- denotes (
T540 6-10 NN denotes BMDC
T541 10-11 -RRB- denotes )
T542 12-16 IN denotes from
T543 17-19 NN denotes WT
T544 20-23 CC denotes and
T545 24-30 JJ denotes mutant
T546 31-35 NN denotes mice
T547 36-45 VB denotes exhibited
T548 46-53 JJ denotes similar
T549 54-63 NN denotes increases
T550 64-66 IN denotes in
T551 67-77 NN denotes expression
T552 78-80 IN denotes of
T553 81-95 JJ denotes co-stimulatory
T554 96-105 NN denotes molecules
T555 106-110 NN denotes CD40
T556 110-111 -COMMA- denotes ,
T557 112-116 NN denotes CD80
T558 116-117 -COMMA- denotes ,
T559 118-121 CC denotes and
T560 122-126 NN denotes CD86
T561 128-135 RB denotes However
T562 135-136 -COMMA- denotes ,
T563 137-147 VB denotes stimulated
T564 148-165 JJ denotes SHARPIN-deficient
T565 166-170 NN denotes BMDC
T566 171-174 VB denotes had
T567 175-182 VB denotes reduced
R457 T540 T539 arg2Of BMDC,(
R458 T541 T539 arg3Of ),(
R459 T543 T544 arg1Of WT,and
R460 T545 T544 arg2Of mutant,and
R461 T546 T542 arg2Of mice,from
R462 T546 T543 arg1Of mice,WT
R463 T546 T545 arg1Of mice,mutant
R466 T549 T547 arg2Of increases,exhibited
R467 T549 T548 arg1Of increases,similar
R468 T549 T550 arg1Of increases,in
R469 T551 T550 arg2Of expression,in
R470 T551 T552 arg1Of expression,of
R471 T555 T556 arg1Of CD40,","
R472 T556 T559 arg1Of ",",and
R473 T557 T556 arg2Of CD80,","
R474 T559 T552 arg2Of and,of
R475 T559 T553 arg1Of and,co-stimulatory
R476 T559 T554 arg1Of and,molecules
R477 T559 T558 arg1Of and,","
R478 T560 T559 arg2Of CD86,and
R479 T565 T563 arg1Of BMDC,stimulated
R480 T565 T564 arg1Of BMDC,SHARPIN-deficient
R481 T565 T566 arg1Of BMDC,had
R482 T565 T567 arg1Of BMDC,reduced
R483 T567 T561 arg1Of reduced,However
R484 T567 T562 arg1Of reduced,","
R485 T567 T566 arg2Of reduced,had

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T263 5-6 -LRB- denotes (
T264 6-10 NNP denotes BMDC
T265 10-11 -RRB- denotes )
T266 12-16 IN denotes from
T267 17-19 NNP denotes WT
T268 20-23 CC denotes and
T269 24-30 JJ denotes mutant
T270 31-35 NNS denotes mice
T271 36-45 VBD denotes exhibited
T272 46-53 JJ denotes similar
T273 54-63 NNS denotes increases
T274 64-66 IN denotes in
T275 67-77 NN denotes expression
T276 78-80 IN denotes of
T277 81-95 JJ denotes co-stimulatory
T278 96-105 NNS denotes molecules
T279 106-110 NNP denotes CD40
T280 110-111 , denotes ,
T281 112-116 NNP denotes CD80
T282 116-117 , denotes ,
T283 118-121 CC denotes and
T284 122-126 NNP denotes CD86
T285 126-127 . denotes .
T286 128-135 RB denotes However
T287 135-136 , denotes ,
T288 137-147 VBD denotes stimulated
T289 148-165 JJ denotes SHARPIN-deficient
T290 166-170 NNP denotes BMDC
T291 171-174 VBD denotes had
T292 175-182 VBN denotes reduced
R179 T263 T264 punct (,BMDC
R181 T265 T264 punct ),BMDC
R182 T266 T264 prep from,BMDC
R183 T267 T266 pobj WT,from
R184 T268 T264 cc and,BMDC
R185 T269 T270 amod mutant,mice
R186 T270 T264 conj mice,BMDC
R188 T272 T273 amod similar,increases
R189 T273 T271 dobj increases,exhibited
R190 T274 T273 prep in,increases
R191 T275 T274 pobj expression,in
R192 T276 T275 prep of,expression
R193 T277 T278 amod co-stimulatory,molecules
R194 T278 T276 pobj molecules,of
R195 T279 T273 conj CD40,increases
R196 T280 T279 punct ",",CD40
R197 T281 T279 conj CD80,CD40
R198 T282 T281 punct ",",CD80
R199 T283 T281 cc and,CD80
R200 T284 T281 conj CD86,CD80
R202 T286 T288 advmod However,stimulated
R203 T287 T288 punct ",",stimulated
R204 T288 T288 ROOT stimulated,stimulated
R205 T289 T290 compound SHARPIN-deficient,BMDC
R206 T290 T292 nsubj BMDC,reduced
R207 T291 T292 aux had,reduced
R208 T292 T288 ccomp reduced,stimulated

events-check-again

Id Subject Object Predicate Lexical cue
T812 106-110 Protein denotes CD40
T813 112-116 Protein denotes CD80
T814 122-126 Protein denotes CD86
T815 148-155 Protein denotes SHARPIN
T816 156-165 Negative_regulation denotes deficient
T817 175-182 Negative_regulation denotes reduced
T818 175-182 Negative_regulation denotes reduced
T819 175-182 Negative_regulation denotes reduced
T820 175-182 Negative_regulation denotes reduced
R700 T815 T816 themeOf SHARPIN,deficient
R701 T816 T818 causeOf deficient,reduced
R702 T816 T820 causeOf deficient,reduced
R703 T816 T819 causeOf deficient,reduced
R704 T816 T817 causeOf deficient,reduced

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T865 106-110 Protein denotes CD40
T866 112-116 Protein denotes CD80
T867 122-126 Protein denotes CD86
T868 67-77 Gene_expression denotes expression
T869 67-77 Gene_expression denotes expression
T870 67-77 Gene_expression denotes expression
T871 54-63 Positive_regulation denotes increases
T872 54-63 Positive_regulation denotes increases
T873 54-63 Positive_regulation denotes increases
T874 148-155 Protein denotes SHARPIN
T878 156-165 Negative_regulation denotes deficient
T885 175-182 Negative_regulation denotes reduced
T886 175-182 Negative_regulation denotes reduced
T887 175-182 Negative_regulation denotes reduced
R644 T865 T868 themeOf CD40,expression
R645 T866 T869 themeOf CD80,expression
R646 T867 T870 themeOf CD86,expression
R647 T868 T871 themeOf expression,increases
R648 T869 T872 themeOf expression,increases
R649 T870 T873 themeOf expression,increases
R650 T874 T878 themeOf SHARPIN,deficient

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T81 106-110 Protein denotes CD40
T82 112-116 Protein denotes CD80
T83 122-126 Protein denotes CD86
T84 148-155 Protein denotes SHARPIN
T85 156-165 Negative_regulation denotes deficient
T86 175-182 Negative_regulation denotes reduced
T87 175-182 Negative_regulation denotes reduced
T88 175-182 Negative_regulation denotes reduced
T89 175-182 Negative_regulation denotes reduced
R678 T85 T87 causeOf deficient,reduced
R679 T85 T89 causeOf deficient,reduced
R680 T85 T88 causeOf deficient,reduced
R681 T85 T86 causeOf deficient,reduced
R677 T84 T85 themeOf SHARPIN,deficient

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T672 106-110 P25942 denotes CD40
T673 112-116 P33681 denotes CD80
T674 122-126 P42081 denotes CD86
T675 148-155 Q9H0F6 denotes SHARPIN

test2

Id Subject Object Predicate Lexical cue
T50 112-116 Protein denotes CD80
T51 122-126 Protein denotes CD86
T52 148-155 Protein denotes SHARPIN
T53 156-165 Negative_regulation denotes deficient
T54 175-182 Negative_regulation denotes reduced
T47 54-63 Positive_regulation denotes increases
T48 67-77 Gene_expression denotes expression
T49 106-110 Protein denotes CD40
R669 T48 T47 themeOf expression,increases
R670 T49 T48 themeOf CD40,expression
R23 T50 T48 themeOf CD80,expression
R24 T51 T48 themeOf CD86,expression
R25 T52 T53 themeOf SHARPIN,deficient
R26 T53 T54 causeOf deficient,reduced