PMC:3279418 / 947-1140 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

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    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T812","span":{"begin":106,"end":110},"obj":"Protein"},{"id":"T813","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T814","span":{"begin":122,"end":126},"obj":"Protein"},{"id":"T815","span":{"begin":148,"end":155},"obj":"Protein"},{"id":"T816","span":{"begin":156,"end":165},"obj":"Negative_regulation"},{"id":"T817","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T818","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T819","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T820","span":{"begin":175,"end":182},"obj":"Negative_regulation"}],"relations":[{"id":"R700","pred":"themeOf","subj":"T815","obj":"T816"},{"id":"R701","pred":"causeOf","subj":"T816","obj":"T818"},{"id":"R702","pred":"causeOf","subj":"T816","obj":"T820"},{"id":"R703","pred":"causeOf","subj":"T816","obj":"T819"},{"id":"R704","pred":"causeOf","subj":"T816","obj":"T817"}],"text":"ells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcript"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T865","span":{"begin":106,"end":110},"obj":"Protein"},{"id":"T866","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T867","span":{"begin":122,"end":126},"obj":"Protein"},{"id":"T868","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T869","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T870","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T871","span":{"begin":54,"end":63},"obj":"Positive_regulation"},{"id":"T872","span":{"begin":54,"end":63},"obj":"Positive_regulation"},{"id":"T873","span":{"begin":54,"end":63},"obj":"Positive_regulation"},{"id":"T874","span":{"begin":148,"end":155},"obj":"Protein"},{"id":"T878","span":{"begin":156,"end":165},"obj":"Negative_regulation"},{"id":"T885","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T886","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T887","span":{"begin":175,"end":182},"obj":"Negative_regulation"}],"relations":[{"id":"R644","pred":"themeOf","subj":"T865","obj":"T868"},{"id":"R645","pred":"themeOf","subj":"T866","obj":"T869"},{"id":"R646","pred":"themeOf","subj":"T867","obj":"T870"},{"id":"R647","pred":"themeOf","subj":"T868","obj":"T871"},{"id":"R648","pred":"themeOf","subj":"T869","obj":"T872"},{"id":"R649","pred":"themeOf","subj":"T870","obj":"T873"},{"id":"R650","pred":"themeOf","subj":"T874","obj":"T878"}],"text":"ells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcript"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T81","span":{"begin":106,"end":110},"obj":"Protein"},{"id":"T82","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T83","span":{"begin":122,"end":126},"obj":"Protein"},{"id":"T84","span":{"begin":148,"end":155},"obj":"Protein"},{"id":"T85","span":{"begin":156,"end":165},"obj":"Negative_regulation"},{"id":"T86","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T87","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T88","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T89","span":{"begin":175,"end":182},"obj":"Negative_regulation"}],"relations":[{"id":"R678","pred":"causeOf","subj":"T85","obj":"T87"},{"id":"R679","pred":"causeOf","subj":"T85","obj":"T89"},{"id":"R680","pred":"causeOf","subj":"T85","obj":"T88"},{"id":"R681","pred":"causeOf","subj":"T85","obj":"T86"},{"id":"R677","pred":"themeOf","subj":"T84","obj":"T85"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"ells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcript"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T672","span":{"begin":106,"end":110},"obj":"P25942"},{"id":"T673","span":{"begin":112,"end":116},"obj":"P33681"},{"id":"T674","span":{"begin":122,"end":126},"obj":"P42081"},{"id":"T675","span":{"begin":148,"end":155},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"ells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcript"}

    test2

    {"project":"test2","denotations":[{"id":"T50","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T51","span":{"begin":122,"end":126},"obj":"Protein"},{"id":"T52","span":{"begin":148,"end":155},"obj":"Protein"},{"id":"T53","span":{"begin":156,"end":165},"obj":"Negative_regulation"},{"id":"T54","span":{"begin":175,"end":182},"obj":"Negative_regulation"},{"id":"T47","span":{"begin":54,"end":63},"obj":"Positive_regulation"},{"id":"T48","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T49","span":{"begin":106,"end":110},"obj":"Protein"}],"relations":[{"id":"R669","pred":"themeOf","subj":"T48","obj":"T47"},{"id":"R670","pred":"themeOf","subj":"T49","obj":"T48"},{"id":"R23","pred":"themeOf","subj":"T50","obj":"T48"},{"id":"R24","pred":"themeOf","subj":"T51","obj":"T48"},{"id":"R25","pred":"themeOf","subj":"T52","obj":"T53"},{"id":"R26","pred":"causeOf","subj":"T53","obj":"T54"}],"text":"ells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcript"}