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PMC:3279418 / 8214-8558 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3463 1-4 DT denotes the
T3464 5-13 VB denotes examined
T3465 14-16 NN denotes DC
T3466 17-24 NN denotes subsets
T3467 25-27 IN denotes in
T3468 28-31 DT denotes the
T3469 32-38 NN denotes spleen
T13537 84-90 NN denotes Effect
T13538 91-93 IN denotes of
T13539 94-101 NNP denotes Sharpin
T13540 102-110 NN denotes mutation
T13541 111-113 IN denotes on
T13542 114-116 NN denotes DC
T13543 117-131 NN denotes subpopulations
T13544 132-135 CC denotes and
T13545 136-146 NN denotes maturation
T13546 148-149 -LRB- denotes (
T13547 149-150 NN denotes A
T13548 150-151 -RRB- denotes )
T13549 152-159 NN denotes Spleens
T13550 160-164 IN denotes from
T13551 165-167 NN denotes WT
T13552 168-171 CC denotes and
T13553 172-176 NN denotes cpdm
T13554 177-181 NN denotes mice
T13555 182-186 VB denotes were
T13556 187-195 VB denotes isolated
T13557 196-199 CC denotes and
T13558 200-207 JJ denotes subject
T13559 208-210 TO denotes to
T13560 211-222 NN denotes collagenase
T13561 223-226 CC denotes and
T13562 227-232 NN denotes DNase
T13563 233-242 NN denotes digestion
T13564 244-247 DT denotes The
T13565 248-256 VB denotes obtained
T13566 257-264 JJ denotes splenic
T13567 265-276 NN denotes homogenates
T13568 277-281 VB denotes were
T13569 282-293 VB denotes centrifuged
T13570 294-298 IN denotes over
T13571 299-300 DT denotes a
T13572 301-308 NN denotes Percoll
T13573 309-317 NN denotes gradient
T13574 318-319 -LRB- denotes (
T13575 319-321 CD denotes 35
T13576 321-322 NN denotes %
T13577 323-326 CC denotes and
T13578 327-329 CD denotes 55
T13579 329-330 NN denotes %
T13580 331-338 NN denotes density
T13581 338-339 -RRB- denotes )
T13582 340-343 IN denotes for
R2898 T3466 T3463 arg1Of subsets,the
R2899 T3466 T3464 arg2Of subsets,examined
R2900 T3466 T3465 arg1Of subsets,DC
R2901 T3466 T3467 arg1Of subsets,in
R2902 T3469 T3467 arg2Of spleen,in
R2903 T3469 T3468 arg1Of spleen,the
R11269 T13537 T13538 arg1Of Effect,of
R11270 T13537 T13541 arg1Of Effect,on
R11271 T13540 T13538 arg2Of mutation,of
R11272 T13540 T13539 arg1Of mutation,Sharpin
R11273 T13543 T13542 arg1Of subpopulations,DC
R11274 T13543 T13544 arg1Of subpopulations,and
R11275 T13544 T13541 arg2Of and,on
R11276 T13545 T13544 arg2Of maturation,and
R11277 T13547 T13546 arg2Of A,(
R11278 T13548 T13546 arg3Of ),(
R11279 T13549 T13546 arg1Of Spleens,(
R11280 T13549 T13550 arg1Of Spleens,from
R11281 T13549 T13555 arg1Of Spleens,were
R11282 T13549 T13556 arg2Of Spleens,isolated
R11283 T13549 T13558 arg1Of Spleens,subject
R11284 T13551 T13552 arg1Of WT,and
R11285 T13553 T13552 arg2Of cpdm,and
R11286 T13554 T13550 arg2Of mice,from
R11287 T13554 T13551 arg1Of mice,WT
R11288 T13554 T13553 arg1Of mice,cpdm
R11289 T13556 T13557 arg1Of isolated,and
R11290 T13557 T13555 arg2Of and,were
R11291 T13558 T13557 arg2Of subject,and
R11292 T13558 T13559 arg1Of subject,to
R11293 T13560 T13561 arg1Of collagenase,and
R11294 T13561 T13559 arg2Of and,to
R11295 T13563 T13561 arg2Of digestion,and
R11296 T13563 T13562 arg1Of digestion,DNase
R11297 T13567 T13564 arg1Of homogenates,The
R11298 T13567 T13565 arg2Of homogenates,obtained
R11299 T13567 T13566 arg1Of homogenates,splenic
R11300 T13567 T13568 arg1Of homogenates,were
R11301 T13567 T13569 arg2Of homogenates,centrifuged
R11302 T13569 T13568 arg2Of centrifuged,were
R11303 T13569 T13570 arg1Of centrifuged,over
R11304 T13573 T13570 arg2Of gradient,over
R11305 T13573 T13571 arg1Of gradient,a
R11306 T13573 T13572 arg1Of gradient,Percoll
R11307 T13573 T13574 arg1Of gradient,(
R11308 T13573 T13582 arg1Of gradient,for
R11309 T13576 T13575 arg1Of %,35
R11310 T13576 T13577 arg1Of %,and
R11311 T13577 T13579 arg1Of and,%
R11312 T13578 T13577 arg2Of 55,and
R11313 T13580 T13574 arg2Of density,(
R11314 T13580 T13576 arg1Of density,%
R11315 T13580 T13578 arg1Of density,55
R11316 T13581 T13574 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3084 1-4 DT denotes the
T3085 5-13 VBN denotes examined
T3086 14-16 NNP denotes DC
T3087 17-24 NNS denotes subsets
T3088 25-27 IN denotes in
T3089 28-31 DT denotes the
T3090 32-38 NN denotes spleen
T3091 38-39 . denotes .
T13275 84-90 NN denotes Effect
T13276 91-93 IN denotes of
T13277 94-101 NNP denotes Sharpin
T13278 102-110 NN denotes mutation
T13279 111-113 IN denotes on
T13280 114-116 NNP denotes DC
T13281 117-131 NNS denotes subpopulations
T13282 132-135 CC denotes and
T13283 136-146 NN denotes maturation
T13284 146-147 . denotes .
T13285 148-149 -LRB- denotes (
T13286 149-150 NNP denotes A
T13287 150-151 -RRB- denotes )
T13288 152-159 NNP denotes Spleens
T13289 160-164 IN denotes from
T13290 165-167 NNP denotes WT
T13291 168-171 CC denotes and
T13292 172-176 NN denotes cpdm
T13293 177-181 NNS denotes mice
T13294 182-186 VBD denotes were
T13295 187-195 VBN denotes isolated
T13296 196-199 CC denotes and
T13297 200-207 JJ denotes subject
T13298 208-210 TO denotes to
T13299 211-222 VB denotes collagenase
T13300 223-226 CC denotes and
T13301 227-232 VB denotes DNase
T13302 233-242 NN denotes digestion
T13303 242-243 . denotes .
T13304 244-247 DT denotes The
T13305 248-256 VBN denotes obtained
T13306 257-264 JJ denotes splenic
T13307 265-276 NNS denotes homogenates
T13308 277-281 VBD denotes were
T13309 282-293 VBN denotes centrifuged
T13310 294-298 IN denotes over
T13311 299-300 DT denotes a
T13312 301-308 NNP denotes Percoll
T13313 309-317 NN denotes gradient
T13314 318-319 -LRB- denotes (
T13315 319-321 CD denotes 35
T13316 321-322 NN denotes %
T13317 323-326 CC denotes and
T13318 327-329 CD denotes 55
T13319 329-330 NN denotes %
T13320 331-338 NN denotes density
T13321 338-339 -RRB- denotes )
T13322 340-343 IN denotes for
R2529 T3084 T3087 det the,subsets
R2530 T3085 T3087 amod examined,subsets
R2531 T3086 T3087 compound DC,subsets
R2533 T3088 T3087 prep in,subsets
R2534 T3089 T3090 det the,spleen
R2535 T3090 T3088 pobj spleen,in
R11007 T13275 T13275 ROOT Effect,Effect
R11008 T13276 T13275 prep of,Effect
R11009 T13277 T13278 compound Sharpin,mutation
R11010 T13278 T13276 pobj mutation,of
R11011 T13279 T13278 prep on,mutation
R11012 T13280 T13281 compound DC,subpopulations
R11013 T13281 T13279 pobj subpopulations,on
R11014 T13282 T13281 cc and,subpopulations
R11015 T13283 T13281 conj maturation,subpopulations
R11016 T13284 T13275 punct .,Effect
R11017 T13285 T13288 punct (,Spleens
R11018 T13286 T13288 nmod A,Spleens
R11019 T13287 T13288 punct ),Spleens
R11020 T13288 T13293 nmod Spleens,mice
R11021 T13289 T13288 prep from,Spleens
R11022 T13290 T13289 pobj WT,from
R11023 T13291 T13290 cc and,WT
R11024 T13292 T13293 compound cpdm,mice
R11025 T13293 T13293 ROOT mice,mice
R11026 T13294 T13293 aux were,mice
R11027 T13295 T13294 acomp isolated,were
R11028 T13296 T13295 cc and,isolated
R11029 T13297 T13295 conj subject,isolated
R11030 T13298 T13297 prep to,subject
R11031 T13299 T13298 pobj collagenase,to
R11032 T13300 T13299 cc and,collagenase
R11033 T13301 T13299 conj DNase,collagenase
R11034 T13302 T13301 dobj digestion,DNase
R11035 T13303 T13294 punct .,were
R11036 T13304 T13307 det The,homogenates
R11037 T13305 T13307 amod obtained,homogenates
R11038 T13306 T13307 amod splenic,homogenates
R11039 T13307 T13309 nsubjpass homogenates,centrifuged
R11040 T13308 T13309 auxpass were,centrifuged
R11041 T13309 T13309 ROOT centrifuged,centrifuged
R11042 T13310 T13309 prep over,centrifuged
R11043 T13311 T13313 det a,gradient
R11044 T13312 T13313 compound Percoll,gradient
R11045 T13313 T13310 pobj gradient,over
R11046 T13314 T13313 punct (,gradient
R11047 T13315 T13316 nummod 35,%
R11048 T13316 T13313 appos %,gradient
R11049 T13317 T13316 cc and,%
R11050 T13318 T13319 nummod 55,%
R11051 T13319 T13320 compound %,density
R11052 T13320 T13316 conj density,%
R11053 T13321 T13313 punct ),gradient
R11054 T13322 T13309 prep for,centrifuged

UBERON-AE

Id Subject Object Predicate Lexical cue
T2871 32-38 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleen
T13262 152-159 http://purl.obolibrary.org/obo/UBERON_0002106 denotes Spleens

GO-BP

Id Subject Object Predicate Lexical cue
T13777 233-242 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

sentences

Id Subject Object Predicate Lexical cue
T13265 84-147 Sentence denotes Effect of Sharpin mutation on DC subpopulations and maturation.
T13266 148-243 Sentence denotes (A) Spleens from WT and cpdm mice were isolated and subject to collagenase and DNase digestion.
T56 40-147 Sentence denotes 10.1371/journal.pone.0031809.g002 Figure 2 Effect of Sharpin mutation on DC subpopulations and maturation.
T57 148-243 Sentence denotes (A) Spleens from WT and cpdm mice were isolated and subject to collagenase and DNase digestion.

events-check-again

Id Subject Object Predicate Lexical cue
T13792 94-101 Protein denotes Sharpin
T13793 102-110 Negative_regulation denotes mutation
R11497 T13792 T13793 themeOf Sharpin,mutation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T13263 94-101 Protein denotes Sharpin
T13264 102-110 Negative_regulation denotes mutation
R11006 T13263 T13264 themeOf Sharpin,mutation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13754 94-101 Q9H0F6 denotes Sharpin

test2

Id Subject Object Predicate Lexical cue
T13259 84-90 Regulation denotes Effect
T13260 94-101 Protein denotes Sharpin
T13261 102-110 Negative_regulation denotes mutation
R11005 T13260 T13261 themeOf Sharpin,mutation