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PMC:3279418 / 6113-6403 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12996 4-12 NN denotes features
T12997 13-15 IN denotes of
T12998 16-23 NN denotes SHARPIN
T12999 25-26 -LRB- denotes (
T13000 26-27 NN denotes A
T13001 27-28 -RRB- denotes )
T13002 29-34 NN denotes COILS
T13003 35-38 CC denotes and
T13004 39-48 NNP denotes MotifScan
T13005 49-57 NN denotes programs
T13006 58-62 VB denotes were
T13007 63-67 VB denotes used
T13008 68-70 TO denotes to
T13009 71-78 VB denotes predict
T13010 79-82 DT denotes the
T13011 83-91 NN denotes presence
T13012 92-94 IN denotes of
T13013 95-97 NN denotes CC
T13014 98-99 -LRB- denotes (
T13015 99-110 NN denotes coiled-coil
T13016 110-111 -RRB- denotes )
T13017 112-118 NN denotes domain
T13018 118-119 -COMMA- denotes ,
T13019 120-123 NN denotes UBL
T13020 124-125 -LRB- denotes (
T13021 125-139 JJ denotes ubiquitin-like
T13022 139-140 -RRB- denotes )
T13023 141-147 NN denotes domain
T13024 148-151 CC denotes and
T13025 152-157 NN denotes ZFRBP
T13026 158-159 -LRB- denotes (
T13027 159-170 NN denotes zinc-finger
T13028 171-182 NN denotes Ran-Binding
T13029 183-190 NN denotes protein
T13030 191-192 CD denotes 2
T13031 192-193 -RRB- denotes )
T13032 194-200 NN denotes domain
T13033 201-206 WDT denotes which
T13034 207-211 VB denotes form
T13035 212-219 JJ denotes similar
T13036 220-225 NN denotes motif
T13037 226-234 NN denotes patterns
T13038 235-237 IN denotes in
T13039 238-241 DT denotes the
T13040 242-249 NN denotes SHARPIN
T13041 250-257 NN denotes protein
T13042 258-260 IN denotes of
T13043 261-266 JJ denotes human
T13044 266-267 -COMMA- denotes ,
T13045 268-273 NN denotes mouse
T13046 274-277 CC denotes and
T13047 278-281 NN denotes rat
T13048 282-290 NN denotes origins.
R10784 T12996 T12997 arg1Of features,of
R10785 T12998 T12997 arg2Of SHARPIN,of
R10786 T13000 T12999 arg2Of A,(
R10787 T13001 T12999 arg3Of ),(
R10788 T13002 T13003 arg1Of COILS,and
R10789 T13004 T13003 arg2Of MotifScan,and
R10790 T13005 T12999 arg1Of programs,(
R10791 T13005 T13002 arg1Of programs,COILS
R10792 T13005 T13004 arg1Of programs,MotifScan
R10793 T13005 T13006 arg1Of programs,were
R10794 T13005 T13007 arg2Of programs,used
R10795 T13007 T13006 arg2Of used,were
R10796 T13009 T13007 arg3Of predict,used
R10797 T13009 T13008 arg1Of predict,to
R10798 T13011 T13009 arg2Of presence,predict
R10799 T13011 T13010 arg1Of presence,the
R10800 T13011 T13012 arg1Of presence,of
R10801 T13015 T13014 arg2Of coiled-coil,(
R10802 T13016 T13014 arg3Of ),(
R10803 T13017 T13013 arg1Of domain,CC
R10804 T13017 T13014 arg1Of domain,(
R10805 T13017 T13018 arg1Of domain,","
R10806 T13018 T13024 arg1Of ",",and
R10807 T13021 T13020 arg2Of ubiquitin-like,(
R10808 T13022 T13020 arg3Of ),(
R10809 T13023 T13018 arg2Of domain,","
R10810 T13023 T13019 arg1Of domain,UBL
R10811 T13023 T13020 arg1Of domain,(
R10812 T13024 T13012 arg2Of and,of
R10813 T13024 T13033 arg1Of and,which
R10814 T13024 T13034 arg1Of and,form
R10815 T13025 T13026 arg1Of ZFRBP,(
R10816 T13029 T13026 arg2Of protein,(
R10817 T13029 T13027 arg1Of protein,zinc-finger
R10818 T13029 T13028 arg1Of protein,Ran-Binding
R10819 T13029 T13030 arg1Of protein,2
R10820 T13031 T13026 arg3Of ),(
R10821 T13032 T13024 arg2Of domain,and
R10822 T13032 T13025 arg1Of domain,ZFRBP
R10823 T13037 T13034 arg2Of patterns,form
R10824 T13037 T13035 arg1Of patterns,similar
R10825 T13037 T13036 arg1Of patterns,motif
R10826 T13037 T13038 arg1Of patterns,in
R10827 T13037 T13042 arg1Of patterns,of
R10828 T13041 T13038 arg2Of protein,in
R10829 T13041 T13039 arg1Of protein,the
R10830 T13041 T13040 arg1Of protein,SHARPIN
R10831 T13043 T13044 arg1Of human,","
R10832 T13045 T13046 arg1Of mouse,and
R10833 T13046 T13044 arg2Of and,","
R10834 T13048 T13046 arg2Of origins.,and
R10835 T13048 T13047 arg1Of origins.,rat

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12776 4-12 NNS denotes features
T12777 13-15 IN denotes of
T12778 16-23 NNP denotes SHARPIN
T12779 23-24 . denotes .
T12780 25-26 -LRB- denotes (
T12781 26-27 NNP denotes A
T12782 27-28 -RRB- denotes )
T12783 29-34 NNP denotes COILS
T12784 35-38 CC denotes and
T12785 39-48 NNP denotes MotifScan
T12786 49-57 NNS denotes programs
T12787 58-62 VBD denotes were
T12788 63-67 VBN denotes used
T12789 68-70 TO denotes to
T12790 71-78 VB denotes predict
T12791 79-82 DT denotes the
T12792 83-91 NN denotes presence
T12793 92-94 IN denotes of
T12794 95-97 NNP denotes CC
T12795 98-99 -LRB- denotes (
T12796 99-110 NN denotes coiled-coil
T12797 110-111 -RRB- denotes )
T12798 112-118 NN denotes domain
T12799 118-119 , denotes ,
T12800 120-123 NNP denotes UBL
T12801 124-125 -LRB- denotes (
T12802 125-139 JJ denotes ubiquitin-like
T12803 139-140 -RRB- denotes )
T12804 141-147 NN denotes domain
T12805 148-151 CC denotes and
T12806 152-157 NNP denotes ZFRBP
T12807 158-159 -LRB- denotes (
T12808 159-170 NN denotes zinc-finger
T12809 171-182 NNP denotes Ran-Binding
T12810 183-190 NN denotes protein
T12811 191-192 CD denotes 2
T12812 192-193 -RRB- denotes )
T12813 194-200 NN denotes domain
T12814 201-206 WDT denotes which
T12815 207-211 VBP denotes form
T12816 212-219 JJ denotes similar
T12817 220-225 NN denotes motif
T12818 226-234 NNS denotes patterns
T12819 235-237 IN denotes in
T12820 238-241 DT denotes the
T12821 242-249 NNP denotes SHARPIN
T12822 250-257 NN denotes protein
T12823 258-260 IN denotes of
T12824 261-266 JJ denotes human
T12825 266-267 , denotes ,
T12826 268-273 NN denotes mouse
T12827 274-277 CC denotes and
T12828 278-281 NN denotes rat
T12829 282-289 NNS denotes origins
T12830 289-290 . denotes .
R10564 T12777 T12776 prep of,features
R10565 T12778 T12777 pobj SHARPIN,of
R10567 T12780 T12788 punct (,used
R10568 T12781 T12786 nmod A,programs
R10569 T12782 T12781 punct ),A
R10570 T12783 T12786 nmod COILS,programs
R10571 T12784 T12783 cc and,COILS
R10572 T12785 T12783 conj MotifScan,COILS
R10573 T12786 T12788 nsubjpass programs,used
R10574 T12787 T12788 auxpass were,used
R10575 T12788 T12788 ROOT used,used
R10576 T12789 T12790 aux to,predict
R10577 T12790 T12788 xcomp predict,used
R10578 T12791 T12792 det the,presence
R10579 T12792 T12790 dobj presence,predict
R10580 T12793 T12792 prep of,presence
R10581 T12794 T12793 pobj CC,of
R10582 T12795 T12794 punct (,CC
R10583 T12796 T12798 nmod coiled-coil,domain
R10584 T12797 T12798 punct ),domain
R10585 T12798 T12794 appos domain,CC
R10586 T12799 T12794 punct ",",CC
R10587 T12800 T12794 conj UBL,CC
R10588 T12801 T12802 punct (,ubiquitin-like
R10589 T12802 T12800 appos ubiquitin-like,UBL
R10590 T12803 T12802 punct ),ubiquitin-like
R10591 T12804 T12793 pobj domain,of
R10592 T12805 T12804 cc and,domain
R10593 T12806 T12813 compound ZFRBP,domain
R10594 T12807 T12810 punct (,protein
R10595 T12808 T12809 compound zinc-finger,Ran-Binding
R10596 T12809 T12810 compound Ran-Binding,protein
R10597 T12810 T12806 appos protein,ZFRBP
R10598 T12811 T12810 nummod 2,protein
R10599 T12812 T12810 punct ),protein
R10600 T12813 T12792 appos domain,presence
R10601 T12814 T12815 nsubj which,form
R10602 T12815 T12813 relcl form,domain
R10603 T12816 T12818 amod similar,patterns
R10604 T12817 T12818 compound motif,patterns
R10605 T12818 T12815 dobj patterns,form
R10606 T12819 T12818 prep in,patterns
R10607 T12820 T12822 det the,protein
R10608 T12821 T12822 compound SHARPIN,protein
R10609 T12822 T12819 pobj protein,in
R10610 T12823 T12822 prep of,protein
R10611 T12824 T12826 amod human,mouse
R10612 T12825 T12824 punct ",",human
R10613 T12826 T12823 pobj mouse,of
R10614 T12827 T12826 cc and,mouse
R10615 T12828 T12829 compound rat,origins
R10616 T12829 T12826 conj origins,mouse
R10617 T12830 T12788 punct .,used

GO-MF

Id Subject Object Predicate Lexical cue
T13214 125-134 http://purl.obolibrary.org/obo/GO_0031386 denotes ubiquitin

events-check-again

Id Subject Object Predicate Lexical cue
T13238 16-23 Protein denotes SHARPIN
T13239 242-249 Protein denotes SHARPIN

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T13246 16-23 Protein denotes SHARPIN
T13247 120-123 Protein denotes UBL
T13248 125-134 Protein denotes ubiquitin
T13249 152-157 Protein denotes ZFRBP
T13250 159-192 Protein denotes zinc-finger Ran-Binding protein 2
T13251 242-257 Protein denotes SHARPIN protein

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T12755 16-23 Protein denotes SHARPIN
T12756 242-249 Protein denotes SHARPIN

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13197 16-23 Q9H0F6 denotes SHARPIN
T13198 242-249 Q9H0F6 denotes SHARPIN

test2

Id Subject Object Predicate Lexical cue Speculation
T12745 16-23 Protein denotes SHARPIN true
T12746 242-249 Protein denotes SHARPIN