PMC:3279418 / 5678-5800
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T2686","span":{"begin":70,"end":79},"obj":"Anaphor"},{"id":"T2687","span":{"begin":17,"end":24},"obj":"Antecedent"}],"relations":[{"id":"R2262","pred":"boundBy","subj":"T2686","obj":"T2687"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2391","span":{"begin":0,"end":7},"obj":"NNP"},{"id":"T2392","span":{"begin":8,"end":12},"obj":"NNP"},{"id":"T2393","span":{"begin":13,"end":16},"obj":"VBD"},{"id":"T2394","span":{"begin":17,"end":24},"obj":"JJ"},{"id":"T2395","span":{"begin":25,"end":27},"obj":"IN"},{"id":"T2396","span":{"begin":28,"end":32},"obj":"NNP"},{"id":"T2397","span":{"begin":33,"end":42},"obj":"VBD"},{"id":"T2398","span":{"begin":43,"end":47},"obj":"IN"},{"id":"T2399","span":{"begin":48,"end":50},"obj":"NNP"},{"id":"T2400","span":{"begin":51,"end":55},"obj":"NNS"},{"id":"T2401","span":{"begin":56,"end":57},"obj":"-LRB-"},{"id":"T2402","span":{"begin":57,"end":61},"obj":"NNP"},{"id":"T2403","span":{"begin":62,"end":64},"obj":"NNP"},{"id":"T2404","span":{"begin":64,"end":65},"obj":"-RRB-"},{"id":"T2405","span":{"begin":66,"end":69},"obj":"CC"},{"id":"T2406","span":{"begin":70,"end":73},"obj":"PRP$"},{"id":"T2407","span":{"begin":74,"end":79},"obj":"NN"},{"id":"T2408","span":{"begin":80,"end":83},"obj":"VBD"},{"id":"T2409","span":{"begin":84,"end":92},"obj":"RB"},{"id":"T2410","span":{"begin":93,"end":102},"obj":"VBN"},{"id":"T2411","span":{"begin":103,"end":105},"obj":"IN"},{"id":"T2412","span":{"begin":106,"end":109},"obj":"NNP"},{"id":"T2413","span":{"begin":110,"end":121},"obj":"NN"},{"id":"T2414","span":{"begin":121,"end":122},"obj":"."}],"relations":[{"id":"R1971","pred":"compound","subj":"T2391","obj":"T2392"},{"id":"R1972","pred":"nsubj","subj":"T2392","obj":"T2393"},{"id":"R1973","pred":"ROOT","subj":"T2393","obj":"T2393"},{"id":"R1974","pred":"acomp","subj":"T2394","obj":"T2393"},{"id":"R1975","pred":"prep","subj":"T2395","obj":"T2394"},{"id":"R1976","pred":"pobj","subj":"T2396","obj":"T2395"},{"id":"R1977","pred":"conj","subj":"T2397","obj":"T2393"},{"id":"R1978","pred":"prep","subj":"T2398","obj":"T2397"},{"id":"R1979","pred":"compound","subj":"T2399","obj":"T2400"},{"id":"R1980","pred":"pobj","subj":"T2400","obj":"T2398"},{"id":"R1981","pred":"punct","subj":"T2401","obj":"T2403"},{"id":"R1982","pred":"compound","subj":"T2402","obj":"T2403"},{"id":"R1983","pred":"appos","subj":"T2403","obj":"T2400"},{"id":"R1984","pred":"punct","subj":"T2404","obj":"T2403"},{"id":"R1985","pred":"cc","subj":"T2405","obj":"T2400"},{"id":"R1986","pred":"poss","subj":"T2406","obj":"T2407"},{"id":"R1987","pred":"nsubjpass","subj":"T2407","obj":"T2410"},{"id":"R1988","pred":"auxpass","subj":"T2408","obj":"T2410"},{"id":"R1989","pred":"advmod","subj":"T2409","obj":"T2410"},{"id":"R1990","pred":"conj","subj":"T2410","obj":"T2393"},{"id":"R1991","pred":"agent","subj":"T2411","obj":"T2410"},{"id":"R1992","pred":"compound","subj":"T2412","obj":"T2413"},{"id":"R1993","pred":"pobj","subj":"T2413","obj":"T2411"},{"id":"R1994","pred":"punct","subj":"T2414","obj":"T2410"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}
sentences
{"project":"sentences","denotations":[{"id":"T2223","span":{"begin":0,"end":122},"obj":"Sentence"},{"id":"T38","span":{"begin":0,"end":122},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T2762","span":{"begin":0,"end":7},"obj":"Protein"},{"id":"T2763","span":{"begin":17,"end":24},"obj":"Transcription"},{"id":"T2764","span":{"begin":93,"end":102},"obj":"Negative_regulation"}],"relations":[{"id":"R2279","pred":"themeOf","subj":"T2762","obj":"T2763"},{"id":"R2280","pred":"themeOf","subj":"T2763","obj":"T2764"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2783","span":{"begin":0,"end":12},"obj":"Protein"},{"id":"T2784","span":{"begin":93,"end":102},"obj":"Negative_regulation"}],"relations":[{"id":"R2289","pred":"themeOf","subj":"T2783","obj":"T2784"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2208","span":{"begin":0,"end":7},"obj":"Protein"},{"id":"T2209","span":{"begin":17,"end":24},"obj":"Transcription"},{"id":"T2210","span":{"begin":93,"end":102},"obj":"Negative_regulation"}],"relations":[{"id":"R1801","pred":"themeOf","subj":"T2208","obj":"T2209"},{"id":"R1802","pred":"themeOf","subj":"T2209","obj":"T2210"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2695","span":{"begin":0,"end":7},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}
test2
{"project":"test2","denotations":[{"id":"T2192","span":{"begin":0,"end":7},"obj":"Protein"}],"text":"Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation."}