PMC:3279418 / 5668-5896 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T2619","span":{"begin":0,"end":4},"obj":"IN"},{"id":"T2620","span":{"begin":5,"end":8},"obj":"NN"},{"id":"T2621","span":{"begin":10,"end":17},"obj":"NN"},{"id":"T2622","span":{"begin":18,"end":22},"obj":"NN"},{"id":"T2623","span":{"begin":23,"end":26},"obj":"VB"},{"id":"T2624","span":{"begin":27,"end":34},"obj":"JJ"},{"id":"T2625","span":{"begin":35,"end":37},"obj":"IN"},{"id":"T2626","span":{"begin":38,"end":42},"obj":"NN"},{"id":"T2627","span":{"begin":43,"end":52},"obj":"VB"},{"id":"T2628","span":{"begin":53,"end":57},"obj":"IN"},{"id":"T2629","span":{"begin":58,"end":60},"obj":"JJ"},{"id":"T2630","span":{"begin":61,"end":65},"obj":"NN"},{"id":"T2631","span":{"begin":66,"end":67},"obj":"-LRB-"},{"id":"T2632","span":{"begin":67,"end":71},"obj":"NNP"},{"id":"T2633","span":{"begin":72,"end":74},"obj":"NN"},{"id":"T2634","span":{"begin":74,"end":75},"obj":"-RRB-"},{"id":"T2635","span":{"begin":76,"end":79},"obj":"CC"},{"id":"T2636","span":{"begin":80,"end":83},"obj":"PRP-DOLLAR-"},{"id":"T2637","span":{"begin":84,"end":89},"obj":"NN"},{"id":"T2638","span":{"begin":90,"end":93},"obj":"VB"},{"id":"T2639","span":{"begin":94,"end":102},"obj":"RB"},{"id":"T2640","span":{"begin":103,"end":112},"obj":"VB"},{"id":"T2641","span":{"begin":113,"end":115},"obj":"IN"},{"id":"T2642","span":{"begin":116,"end":119},"obj":"NN"},{"id":"T2643","span":{"begin":120,"end":131},"obj":"NN"},{"id":"T2644","span":{"begin":133,"end":138},"obj":"EX"},{"id":"T2645","span":{"begin":139,"end":142},"obj":"VB"},{"id":"T2646","span":{"begin":143,"end":144},"obj":"DT"},{"id":"T2647","span":{"begin":145,"end":156},"obj":"JJ"},{"id":"T2648","span":{"begin":157,"end":166},"obj":"NN"},{"id":"T2649","span":{"begin":167,"end":169},"obj":"IN"},{"id":"T2650","span":{"begin":170,"end":177},"obj":"NN"},{"id":"T2651","span":{"begin":178,"end":182},"obj":"NN"},{"id":"T2652","span":{"begin":183,"end":184},"obj":"-LRB-"},{"id":"T2653","span":{"begin":184,"end":192},"obj":"JJ"},{"id":"T2654","span":{"begin":192,"end":193},"obj":"-RRB-"},{"id":"T2655","span":{"begin":194,"end":196},"obj":"IN"},{"id":"T2656","span":{"begin":197,"end":201},"obj":"NN"},{"id":"T2657","span":{"begin":202,"end":211},"obj":"VB"},{"id":"T2658","span":{"begin":212,"end":216},"obj":"IN"},{"id":"T2659","span":{"begin":217,"end":221},"obj":"NN"},{"id":"T2660","span":{"begin":222,"end":226},"obj":"NN"}],"relations":[{"id":"R2197","pred":"arg2Of","subj":"T2620","obj":"T2619"},{"id":"R2198","pred":"arg1Of","subj":"T2622","obj":"T2621"},{"id":"R2199","pred":"arg1Of","subj":"T2622","obj":"T2623"},{"id":"R2200","pred":"arg1Of","subj":"T2622","obj":"T2624"},{"id":"R2201","pred":"arg1Of","subj":"T2623","obj":"T2635"},{"id":"R2202","pred":"arg2Of","subj":"T2624","obj":"T2623"},{"id":"R2203","pred":"arg1Of","subj":"T2624","obj":"T2625"},{"id":"R2204","pred":"arg2Of","subj":"T2626","obj":"T2625"},{"id":"R2205","pred":"arg2Of","subj":"T2626","obj":"T2627"},{"id":"R2206","pred":"arg1Of","subj":"T2627","obj":"T2628"},{"id":"R2207","pred":"arg1Of","subj":"T2627","obj":"T2631"},{"id":"R2208","pred":"arg2Of","subj":"T2630","obj":"T2628"},{"id":"R2209","pred":"arg1Of","subj":"T2630","obj":"T2629"},{"id":"R2210","pred":"arg2Of","subj":"T2633","obj":"T2631"},{"id":"R2211","pred":"arg1Of","subj":"T2633","obj":"T2632"},{"id":"R2212","pred":"arg3Of","subj":"T2634","obj":"T2631"},{"id":"R2213","pred":"arg1Of","subj":"T2637","obj":"T2636"},{"id":"R2214","pred":"arg1Of","subj":"T2637","obj":"T2638"},{"id":"R2215","pred":"arg2Of","subj":"T2637","obj":"T2640"},{"id":"R2216","pred":"arg2Of","subj":"T2640","obj":"T2635"},{"id":"R2217","pred":"arg2Of","subj":"T2640","obj":"T2638"},{"id":"R2218","pred":"arg1Of","subj":"T2640","obj":"T2639"},{"id":"R2219","pred":"arg1Of","subj":"T2640","obj":"T2641"},{"id":"R2220","pred":"arg2Of","subj":"T2643","obj":"T2641"},{"id":"R2221","pred":"arg1Of","subj":"T2643","obj":"T2642"},{"id":"R2222","pred":"arg1Of","subj":"T2644","obj":"T2645"},{"id":"R2223","pred":"arg1Of","subj":"T2645","obj":"T2655"},{"id":"R2224","pred":"arg2Of","subj":"T2648","obj":"T2645"},{"id":"R2225","pred":"arg1Of","subj":"T2648","obj":"T2646"},{"id":"R2226","pred":"arg1Of","subj":"T2648","obj":"T2647"},{"id":"R2227","pred":"arg1Of","subj":"T2648","obj":"T2649"},{"id":"R2228","pred":"arg2Of","subj":"T2651","obj":"T2649"},{"id":"R2229","pred":"arg1Of","subj":"T2651","obj":"T2650"},{"id":"R2230","pred":"arg1Of","subj":"T2651","obj":"T2652"},{"id":"R2231","pred":"arg2Of","subj":"T2653","obj":"T2652"},{"id":"R2232","pred":"arg3Of","subj":"T2654","obj":"T2652"},{"id":"R2233","pred":"arg2Of","subj":"T2656","obj":"T2655"},{"id":"R2234","pred":"arg2Of","subj":"T2656","obj":"T2657"},{"id":"R2235","pred":"arg1Of","subj":"T2657","obj":"T2658"},{"id":"R2236","pred":"arg2Of","subj":"T2660","obj":"T2658"},{"id":"R2237","pred":"arg1Of","subj":"T2660","obj":"T2659"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    bionlp-st-ge-2016-coref

    {"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T2686","span":{"begin":80,"end":89},"obj":"Anaphor"},{"id":"T2687","span":{"begin":27,"end":34},"obj":"Antecedent"}],"relations":[{"id":"R2262","pred":"boundBy","subj":"T2686","obj":"T2687"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2388","span":{"begin":0,"end":4},"obj":"IN"},{"id":"T2389","span":{"begin":5,"end":8},"obj":"NNP"},{"id":"T2390","span":{"begin":8,"end":9},"obj":"."},{"id":"T2391","span":{"begin":10,"end":17},"obj":"NNP"},{"id":"T2392","span":{"begin":18,"end":22},"obj":"NNP"},{"id":"T2393","span":{"begin":23,"end":26},"obj":"VBD"},{"id":"T2394","span":{"begin":27,"end":34},"obj":"JJ"},{"id":"T2395","span":{"begin":35,"end":37},"obj":"IN"},{"id":"T2396","span":{"begin":38,"end":42},"obj":"NNP"},{"id":"T2397","span":{"begin":43,"end":52},"obj":"VBD"},{"id":"T2398","span":{"begin":53,"end":57},"obj":"IN"},{"id":"T2399","span":{"begin":58,"end":60},"obj":"NNP"},{"id":"T2400","span":{"begin":61,"end":65},"obj":"NNS"},{"id":"T2401","span":{"begin":66,"end":67},"obj":"-LRB-"},{"id":"T2402","span":{"begin":67,"end":71},"obj":"NNP"},{"id":"T2403","span":{"begin":72,"end":74},"obj":"NNP"},{"id":"T2404","span":{"begin":74,"end":75},"obj":"-RRB-"},{"id":"T2405","span":{"begin":76,"end":79},"obj":"CC"},{"id":"T2406","span":{"begin":80,"end":83},"obj":"PRP$"},{"id":"T2407","span":{"begin":84,"end":89},"obj":"NN"},{"id":"T2408","span":{"begin":90,"end":93},"obj":"VBD"},{"id":"T2409","span":{"begin":94,"end":102},"obj":"RB"},{"id":"T2410","span":{"begin":103,"end":112},"obj":"VBN"},{"id":"T2411","span":{"begin":113,"end":115},"obj":"IN"},{"id":"T2412","span":{"begin":116,"end":119},"obj":"NNP"},{"id":"T2413","span":{"begin":120,"end":131},"obj":"NN"},{"id":"T2414","span":{"begin":131,"end":132},"obj":"."},{"id":"T2415","span":{"begin":133,"end":138},"obj":"EX"},{"id":"T2416","span":{"begin":139,"end":142},"obj":"VBD"},{"id":"T2417","span":{"begin":143,"end":144},"obj":"DT"},{"id":"T2418","span":{"begin":145,"end":156},"obj":"JJ"},{"id":"T2419","span":{"begin":157,"end":166},"obj":"NN"},{"id":"T2420","span":{"begin":167,"end":169},"obj":"IN"},{"id":"T2421","span":{"begin":170,"end":177},"obj":"NNP"},{"id":"T2422","span":{"begin":178,"end":182},"obj":"NNP"},{"id":"T2423","span":{"begin":183,"end":184},"obj":"-LRB-"},{"id":"T2424","span":{"begin":184,"end":185},"obj":"CD"},{"id":"T2425","span":{"begin":186,"end":192},"obj":"JJ"},{"id":"T2426","span":{"begin":192,"end":193},"obj":"-RRB-"},{"id":"T2427","span":{"begin":194,"end":196},"obj":"IN"},{"id":"T2428","span":{"begin":197,"end":201},"obj":"NNP"},{"id":"T2429","span":{"begin":202,"end":211},"obj":"VBD"},{"id":"T2430","span":{"begin":212,"end":216},"obj":"IN"},{"id":"T2431","span":{"begin":217,"end":221},"obj":"NN"},{"id":"T2432","span":{"begin":222,"end":226},"obj":"NNS"},{"id":"T2433","span":{"begin":226,"end":227},"obj":"."}],"relations":[{"id":"R1969","pred":"pobj","subj":"T2389","obj":"T2388"},{"id":"R1971","pred":"compound","subj":"T2391","obj":"T2392"},{"id":"R1972","pred":"nsubj","subj":"T2392","obj":"T2393"},{"id":"R1973","pred":"ROOT","subj":"T2393","obj":"T2393"},{"id":"R1974","pred":"acomp","subj":"T2394","obj":"T2393"},{"id":"R1975","pred":"prep","subj":"T2395","obj":"T2394"},{"id":"R1976","pred":"pobj","subj":"T2396","obj":"T2395"},{"id":"R1977","pred":"conj","subj":"T2397","obj":"T2393"},{"id":"R1978","pred":"prep","subj":"T2398","obj":"T2397"},{"id":"R1979","pred":"compound","subj":"T2399","obj":"T2400"},{"id":"R1980","pred":"pobj","subj":"T2400","obj":"T2398"},{"id":"R1981","pred":"punct","subj":"T2401","obj":"T2403"},{"id":"R1982","pred":"compound","subj":"T2402","obj":"T2403"},{"id":"R1983","pred":"appos","subj":"T2403","obj":"T2400"},{"id":"R1984","pred":"punct","subj":"T2404","obj":"T2403"},{"id":"R1985","pred":"cc","subj":"T2405","obj":"T2400"},{"id":"R1986","pred":"poss","subj":"T2406","obj":"T2407"},{"id":"R1987","pred":"nsubjpass","subj":"T2407","obj":"T2410"},{"id":"R1988","pred":"auxpass","subj":"T2408","obj":"T2410"},{"id":"R1989","pred":"advmod","subj":"T2409","obj":"T2410"},{"id":"R1990","pred":"conj","subj":"T2410","obj":"T2393"},{"id":"R1991","pred":"agent","subj":"T2411","obj":"T2410"},{"id":"R1992","pred":"compound","subj":"T2412","obj":"T2413"},{"id":"R1993","pred":"pobj","subj":"T2413","obj":"T2411"},{"id":"R1994","pred":"punct","subj":"T2414","obj":"T2410"},{"id":"R1995","pred":"expl","subj":"T2415","obj":"T2416"},{"id":"R1996","pred":"ROOT","subj":"T2416","obj":"T2416"},{"id":"R1997","pred":"det","subj":"T2417","obj":"T2419"},{"id":"R1998","pred":"amod","subj":"T2418","obj":"T2419"},{"id":"R1999","pred":"attr","subj":"T2419","obj":"T2416"},{"id":"R2000","pred":"prep","subj":"T2420","obj":"T2419"},{"id":"R2001","pred":"compound","subj":"T2421","obj":"T2422"},{"id":"R2002","pred":"pobj","subj":"T2422","obj":"T2420"},{"id":"R2003","pred":"punct","subj":"T2423","obj":"T2422"},{"id":"R2004","pred":"appos","subj":"T2424","obj":"T2422"},{"id":"R2005","pred":"appos","subj":"T2425","obj":"T2422"},{"id":"R2006","pred":"punct","subj":"T2426","obj":"T2425"},{"id":"R2007","pred":"prep","subj":"T2427","obj":"T2425"},{"id":"R2008","pred":"pobj","subj":"T2428","obj":"T2427"},{"id":"R2009","pred":"acl","subj":"T2429","obj":"T2419"},{"id":"R2010","pred":"prep","subj":"T2430","obj":"T2429"},{"id":"R2011","pred":"amod","subj":"T2431","obj":"T2432"},{"id":"R2012","pred":"pobj","subj":"T2432","obj":"T2430"},{"id":"R2013","pred":"punct","subj":"T2433","obj":"T2416"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    sentences

    {"project":"sentences","denotations":[{"id":"T2223","span":{"begin":10,"end":132},"obj":"Sentence"},{"id":"T2224","span":{"begin":133,"end":227},"obj":"Sentence"},{"id":"T38","span":{"begin":10,"end":132},"obj":"Sentence"},{"id":"T39","span":{"begin":133,"end":227},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T2762","span":{"begin":10,"end":17},"obj":"Protein"},{"id":"T2763","span":{"begin":27,"end":34},"obj":"Transcription"},{"id":"T2764","span":{"begin":103,"end":112},"obj":"Negative_regulation"},{"id":"T2765","span":{"begin":157,"end":166},"obj":"Negative_regulation"},{"id":"T2766","span":{"begin":170,"end":177},"obj":"Protein"}],"relations":[{"id":"R2279","pred":"themeOf","subj":"T2762","obj":"T2763"},{"id":"R2280","pred":"themeOf","subj":"T2763","obj":"T2764"},{"id":"R2281","pred":"themeOf","subj":"T2766","obj":"T2765"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2783","span":{"begin":10,"end":22},"obj":"Protein"},{"id":"T2784","span":{"begin":103,"end":112},"obj":"Negative_regulation"},{"id":"T2785","span":{"begin":170,"end":182},"obj":"Protein"},{"id":"T2786","span":{"begin":157,"end":166},"obj":"Negative_regulation"}],"relations":[{"id":"R2289","pred":"themeOf","subj":"T2783","obj":"T2784"},{"id":"R2290","pred":"themeOf","subj":"T2785","obj":"T2786"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2208","span":{"begin":10,"end":17},"obj":"Protein"},{"id":"T2209","span":{"begin":27,"end":34},"obj":"Transcription"},{"id":"T2210","span":{"begin":103,"end":112},"obj":"Negative_regulation"},{"id":"T2211","span":{"begin":157,"end":166},"obj":"Negative_regulation"},{"id":"T2212","span":{"begin":170,"end":177},"obj":"Protein"}],"relations":[{"id":"R1801","pred":"themeOf","subj":"T2208","obj":"T2209"},{"id":"R1802","pred":"themeOf","subj":"T2209","obj":"T2210"},{"id":"R1803","pred":"themeOf","subj":"T2212","obj":"T2211"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2695","span":{"begin":10,"end":17},"obj":"Q9H0F6"},{"id":"T2696","span":{"begin":170,"end":177},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}

    test2

    {"project":"test2","denotations":[{"id":"T2192","span":{"begin":10,"end":17},"obj":"Protein"},{"id":"T2193","span":{"begin":157,"end":166},"obj":"Negative_regulation"},{"id":"T2194","span":{"begin":170,"end":177},"obj":"Protein"}],"relations":[{"id":"R1797","pred":"themeOf","subj":"T2194","obj":"T2193"}],"text":"with LPS. Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation. There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice. "}