> top > docs > PMC:3279418 > spans > 5668-5896 > annotations

PMC:3279418 / 5668-5896 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2619 0-4 IN denotes with
T2620 5-8 NN denotes LPS
T2621 10-17 NN denotes Sharpin
T2622 18-22 NN denotes mRNA
T2623 23-26 VB denotes was
T2624 27-34 JJ denotes present
T2625 35-37 IN denotes in
T2626 38-42 NN denotes BMDC
T2627 43-52 VB denotes generated
T2628 53-57 IN denotes from
T2629 58-60 JJ denotes WT
T2630 61-65 NN denotes mice
T2631 66-67 -LRB- denotes (
T2632 67-71 NNP denotes Fig.
T2633 72-74 NN denotes 1D
T2634 74-75 -RRB- denotes )
T2635 76-79 CC denotes and
T2636 80-83 PRP-DOLLAR- denotes its
T2637 84-89 NN denotes level
T2638 90-93 VB denotes was
T2639 94-102 RB denotes modestly
T2640 103-112 VB denotes decreased
T2641 113-115 IN denotes by
T2642 116-119 NN denotes LPS
T2643 120-131 NN denotes stimulation
T2644 133-138 EX denotes There
T2645 139-142 VB denotes was
T2646 143-144 DT denotes a
T2647 145-156 JJ denotes significant
T2648 157-166 NN denotes reduction
T2649 167-169 IN denotes of
T2650 170-177 NN denotes Sharpin
T2651 178-182 NN denotes mRNA
T2652 183-184 -LRB- denotes (
T2653 184-192 JJ denotes 6–7-fold
T2654 192-193 -RRB- denotes )
T2655 194-196 IN denotes in
T2656 197-201 NN denotes BMDC
T2657 202-211 VB denotes generated
T2658 212-216 IN denotes from
T2659 217-221 NN denotes cpdm
T2660 222-226 NN denotes mice
R2197 T2620 T2619 arg2Of LPS,with
R2198 T2622 T2621 arg1Of mRNA,Sharpin
R2199 T2622 T2623 arg1Of mRNA,was
R2200 T2622 T2624 arg1Of mRNA,present
R2201 T2623 T2635 arg1Of was,and
R2202 T2624 T2623 arg2Of present,was
R2203 T2624 T2625 arg1Of present,in
R2204 T2626 T2625 arg2Of BMDC,in
R2205 T2626 T2627 arg2Of BMDC,generated
R2206 T2627 T2628 arg1Of generated,from
R2207 T2627 T2631 arg1Of generated,(
R2208 T2630 T2628 arg2Of mice,from
R2209 T2630 T2629 arg1Of mice,WT
R2210 T2633 T2631 arg2Of 1D,(
R2211 T2633 T2632 arg1Of 1D,Fig.
R2212 T2634 T2631 arg3Of ),(
R2213 T2637 T2636 arg1Of level,its
R2214 T2637 T2638 arg1Of level,was
R2215 T2637 T2640 arg2Of level,decreased
R2216 T2640 T2635 arg2Of decreased,and
R2217 T2640 T2638 arg2Of decreased,was
R2218 T2640 T2639 arg1Of decreased,modestly
R2219 T2640 T2641 arg1Of decreased,by
R2220 T2643 T2641 arg2Of stimulation,by
R2221 T2643 T2642 arg1Of stimulation,LPS
R2222 T2644 T2645 arg1Of There,was
R2223 T2645 T2655 arg1Of was,in
R2224 T2648 T2645 arg2Of reduction,was
R2225 T2648 T2646 arg1Of reduction,a
R2226 T2648 T2647 arg1Of reduction,significant
R2227 T2648 T2649 arg1Of reduction,of
R2228 T2651 T2649 arg2Of mRNA,of
R2229 T2651 T2650 arg1Of mRNA,Sharpin
R2230 T2651 T2652 arg1Of mRNA,(
R2231 T2653 T2652 arg2Of 6–7-fold,(
R2232 T2654 T2652 arg3Of ),(
R2233 T2656 T2655 arg2Of BMDC,in
R2234 T2656 T2657 arg2Of BMDC,generated
R2235 T2657 T2658 arg1Of generated,from
R2236 T2660 T2658 arg2Of mice,from
R2237 T2660 T2659 arg1Of mice,cpdm

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T2686 80-89 Anaphor denotes its level
T2687 27-34 Antecedent denotes present
R2262 T2686 T2687 boundBy its level,present

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2388 0-4 IN denotes with
T2389 5-8 NNP denotes LPS
T2390 8-9 . denotes .
T2391 10-17 NNP denotes Sharpin
T2392 18-22 NNP denotes mRNA
T2393 23-26 VBD denotes was
T2394 27-34 JJ denotes present
T2395 35-37 IN denotes in
T2396 38-42 NNP denotes BMDC
T2397 43-52 VBD denotes generated
T2398 53-57 IN denotes from
T2399 58-60 NNP denotes WT
T2400 61-65 NNS denotes mice
T2401 66-67 -LRB- denotes (
T2402 67-71 NNP denotes Fig.
T2403 72-74 NNP denotes 1D
T2404 74-75 -RRB- denotes )
T2405 76-79 CC denotes and
T2406 80-83 PRP$ denotes its
T2407 84-89 NN denotes level
T2408 90-93 VBD denotes was
T2409 94-102 RB denotes modestly
T2410 103-112 VBN denotes decreased
T2411 113-115 IN denotes by
T2412 116-119 NNP denotes LPS
T2413 120-131 NN denotes stimulation
T2414 131-132 . denotes .
T2415 133-138 EX denotes There
T2416 139-142 VBD denotes was
T2417 143-144 DT denotes a
T2418 145-156 JJ denotes significant
T2419 157-166 NN denotes reduction
T2420 167-169 IN denotes of
T2421 170-177 NNP denotes Sharpin
T2422 178-182 NNP denotes mRNA
T2423 183-184 -LRB- denotes (
T2424 184-185 CD denotes 6
T2425 186-192 JJ denotes 7-fold
T2426 192-193 -RRB- denotes )
T2427 194-196 IN denotes in
T2428 197-201 NNP denotes BMDC
T2429 202-211 VBD denotes generated
T2430 212-216 IN denotes from
T2431 217-221 NN denotes cpdm
T2432 222-226 NNS denotes mice
T2433 226-227 . denotes .
R1969 T2389 T2388 pobj LPS,with
R1971 T2391 T2392 compound Sharpin,mRNA
R1972 T2392 T2393 nsubj mRNA,was
R1973 T2393 T2393 ROOT was,was
R1974 T2394 T2393 acomp present,was
R1975 T2395 T2394 prep in,present
R1976 T2396 T2395 pobj BMDC,in
R1977 T2397 T2393 conj generated,was
R1978 T2398 T2397 prep from,generated
R1979 T2399 T2400 compound WT,mice
R1980 T2400 T2398 pobj mice,from
R1981 T2401 T2403 punct (,1D
R1982 T2402 T2403 compound Fig.,1D
R1983 T2403 T2400 appos 1D,mice
R1984 T2404 T2403 punct ),1D
R1985 T2405 T2400 cc and,mice
R1986 T2406 T2407 poss its,level
R1987 T2407 T2410 nsubjpass level,decreased
R1988 T2408 T2410 auxpass was,decreased
R1989 T2409 T2410 advmod modestly,decreased
R1990 T2410 T2393 conj decreased,was
R1991 T2411 T2410 agent by,decreased
R1992 T2412 T2413 compound LPS,stimulation
R1993 T2413 T2411 pobj stimulation,by
R1994 T2414 T2410 punct .,decreased
R1995 T2415 T2416 expl There,was
R1996 T2416 T2416 ROOT was,was
R1997 T2417 T2419 det a,reduction
R1998 T2418 T2419 amod significant,reduction
R1999 T2419 T2416 attr reduction,was
R2000 T2420 T2419 prep of,reduction
R2001 T2421 T2422 compound Sharpin,mRNA
R2002 T2422 T2420 pobj mRNA,of
R2003 T2423 T2422 punct (,mRNA
R2004 T2424 T2422 appos 6,mRNA
R2005 T2425 T2422 appos 7-fold,mRNA
R2006 T2426 T2425 punct ),7-fold
R2007 T2427 T2425 prep in,7-fold
R2008 T2428 T2427 pobj BMDC,in
R2009 T2429 T2419 acl generated,reduction
R2010 T2430 T2429 prep from,generated
R2011 T2431 T2432 amod cpdm,mice
R2012 T2432 T2430 pobj mice,from
R2013 T2433 T2416 punct .,was

sentences

Id Subject Object Predicate Lexical cue
T2223 10-132 Sentence denotes Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation.
T2224 133-227 Sentence denotes There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice.
T38 10-132 Sentence denotes Sharpin mRNA was present in BMDC generated from WT mice (Fig. 1D) and its level was modestly decreased by LPS stimulation.
T39 133-227 Sentence denotes There was a significant reduction of Sharpin mRNA (6–7-fold) in BMDC generated from cpdm mice.

events-check-again

Id Subject Object Predicate Lexical cue
T2762 10-17 Protein denotes Sharpin
T2763 27-34 Transcription denotes present
T2764 103-112 Negative_regulation denotes decreased
T2765 157-166 Negative_regulation denotes reduction
T2766 170-177 Protein denotes Sharpin
R2279 T2762 T2763 themeOf Sharpin,present
R2280 T2763 T2764 themeOf present,decreased
R2281 T2766 T2765 themeOf Sharpin,reduction

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2783 10-22 Protein denotes Sharpin mRNA
T2784 103-112 Negative_regulation denotes decreased
T2785 170-182 Protein denotes Sharpin mRNA
T2786 157-166 Negative_regulation denotes reduction
R2289 T2783 T2784 themeOf Sharpin mRNA,decreased
R2290 T2785 T2786 themeOf Sharpin mRNA,reduction

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T2208 10-17 Protein denotes Sharpin
T2209 27-34 Transcription denotes present
T2210 103-112 Negative_regulation denotes decreased
T2211 157-166 Negative_regulation denotes reduction
T2212 170-177 Protein denotes Sharpin
R1801 T2208 T2209 themeOf Sharpin,present
R1802 T2209 T2210 themeOf present,decreased
R1803 T2212 T2211 themeOf Sharpin,reduction

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2695 10-17 Q9H0F6 denotes Sharpin
T2696 170-177 Q9H0F6 denotes Sharpin

test2

Id Subject Object Predicate Lexical cue
T2192 10-17 Protein denotes Sharpin
T2193 157-166 Negative_regulation denotes reduction
T2194 170-177 Protein denotes Sharpin
R1797 T2194 T2193 themeOf Sharpin,reduction