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PMC:3279418 / 21157-21397 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22348129-19720113-89575698 183-185 19720113 denotes 32
22348129-17979840-89575699 189-191 17979840 denotes 35
22348129-16267105-89575700 230-232 16267105 denotes 36
22348129-16878026-89575701 236-238 16878026 denotes 37
T91786 183-185 19720113 denotes 32
T32556 189-191 17979840 denotes 35
T39324 230-232 16267105 denotes 36
T67123 236-238 16878026 denotes 37

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8223 0-5 DT denotes These
T8224 6-13 VB denotes induced
T8225 14-20 CC denotes and/or
T8226 21-30 JJ denotes intrinsic
T8227 31-40 JJ denotes apoptotic
T8228 41-46 NN denotes cells
T8229 47-50 MD denotes can
T8230 51-58 VB denotes release
T8231 59-66 JJ denotes various
T8232 67-72 NN denotes types
T8233 73-75 IN denotes of
T8234 76-81 NN denotes DAMPs
T8235 82-86 WDT denotes that
T8236 87-92 VB denotes exert
T8237 93-98 PRP-DOLLAR- denotes their
T8238 99-115 JJ denotes pro-inflammatory
T8239 116-126 NN denotes properties
T8240 127-129 IN denotes by
T8241 130-140 VB denotes activating
T8242 141-143 NN denotes DC
T8243 144-151 IN denotes through
T8244 152-159 NN denotes pattern
T8245 160-171 NN denotes recognition
T8246 172-181 NN denotes receptors
T8247 182-183 -LRB- denotes [
T8248 183-185 CD denotes 32
T8249 185-186 -RRB- denotes ]
T8250 186-187 -COMMA- denotes ,
T8251 188-189 -LRB- denotes [
T8252 189-191 CD denotes 35
T8253 191-192 -RRB- denotes ]
T8254 192-193 -COMMA- denotes ,
T8255 194-198 JJ denotes such
T8256 199-201 IN denotes as
T8257 202-207 NN denotes HMGB1
T8258 208-218 VB denotes recognized
T8259 219-221 IN denotes by
T8260 222-228 NN denotes TLR2/4
T8261 229-230 -LRB- denotes [
T8262 230-232 CD denotes 36
T8263 232-233 -RRB- denotes ]
T8264 233-234 -COMMA- denotes ,
T8265 235-236 -LRB- denotes [
T8266 236-238 CD denotes 37
T8267 238-239 -RRB- denotes ]
R6841 T8224 T8225 arg1Of induced,and/or
R6842 T8226 T8225 arg2Of intrinsic,and/or
R6843 T8228 T8223 arg1Of cells,These
R6844 T8228 T8224 arg1Of cells,induced
R6845 T8228 T8226 arg1Of cells,intrinsic
R6846 T8228 T8227 arg1Of cells,apoptotic
R6847 T8228 T8229 arg1Of cells,can
R6848 T8228 T8230 arg1Of cells,release
R6849 T8230 T8229 arg2Of release,can
R6850 T8230 T8264 arg1Of release,","
R6851 T8230 T8265 arg1Of release,[
R6853 T8232 T8230 arg2Of types,release
R6854 T8232 T8231 arg1Of types,various
R6855 T8232 T8233 arg1Of types,of
R6857 T8234 T8233 arg2Of DAMPs,of
R6858 T8234 T8235 arg1Of DAMPs,that
R6859 T8234 T8236 arg1Of DAMPs,exert
R6860 T8234 T8241 arg1Of DAMPs,activating
R6861 T8234 T8254 arg1Of DAMPs,","
R6862 T8234 T8256 arg1Of DAMPs,as
R6864 T8236 T8240 arg1Of exert,by
R6865 T8236 T8250 arg1Of exert,","
R6866 T8236 T8251 arg1Of exert,[
R6869 T8239 T8236 arg2Of properties,exert
R6870 T8239 T8237 arg1Of properties,their
R6871 T8239 T8238 arg1Of properties,pro-inflammatory
R6873 T8241 T8240 arg2Of activating,by
R6874 T8241 T8243 arg1Of activating,through
R6875 T8242 T8241 arg2Of DC,activating
R6877 T8246 T8243 arg2Of receptors,through
R6878 T8246 T8244 arg1Of receptors,pattern
R6879 T8246 T8245 arg1Of receptors,recognition
R6880 T8246 T8247 arg1Of receptors,[
R6881 T8248 T8247 arg2Of 32,[
R6883 T8249 T8247 arg3Of ],[
R6884 T8252 T8251 arg2Of 35,[
R6886 T8253 T8251 arg3Of ],[
R6889 T8256 T8255 arg1Of as,such
R6890 T8257 T8256 arg2Of HMGB1,as
R6891 T8257 T8258 arg2Of HMGB1,recognized
R6892 T8260 T8258 arg1Of TLR2/4,recognized
R6893 T8260 T8259 arg2Of TLR2/4,by
R6894 T8260 T8261 arg1Of TLR2/4,[
R6895 T8262 T8261 arg2Of 36,[
R6897 T8263 T8261 arg3Of ],[
R6898 T8266 T8265 arg2Of 37,[
R6900 T8267 T8265 arg3Of ],[

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7097 0-5 DT denotes These
T7098 6-13 JJ denotes induced
T7099 14-20 CC denotes and/or
T7100 21-30 JJ denotes intrinsic
T7101 31-40 JJ denotes apoptotic
T7102 41-46 NNS denotes cells
T7103 47-50 MD denotes can
T7104 51-58 VB denotes release
T7105 59-66 JJ denotes various
T7106 67-72 NNS denotes types
T7107 73-75 IN denotes of
T7108 76-81 NNS denotes DAMPs
T7109 82-86 WDT denotes that
T7110 87-92 VBP denotes exert
T7111 93-98 PRP$ denotes their
T7112 99-115 JJ denotes pro-inflammatory
T7113 116-126 NNS denotes properties
T7114 127-129 IN denotes by
T7115 130-140 VBG denotes activating
T7116 141-143 NNP denotes DC
T7117 144-151 IN denotes through
T7118 152-159 NN denotes pattern
T7119 160-171 NN denotes recognition
T7120 172-181 NNS denotes receptors
T7121 182-183 NNP denotes [
T7122 183-185 CD denotes 32
T7123 185-186 NNP denotes ]
T7124 186-187 , denotes ,
T7125 188-189 NNP denotes [
T7126 189-191 CD denotes 35
T7127 191-192 NNP denotes ]
T7128 192-193 , denotes ,
T7129 194-198 JJ denotes such
T7130 199-201 IN denotes as
T7131 202-207 CD denotes HMGB1
T7132 208-218 VBN denotes recognized
T7133 219-221 IN denotes by
T7134 222-228 CD denotes TLR2/4
T7135 229-230 NNP denotes [
T7136 230-232 CD denotes 36
T7137 232-233 NNP denotes ]
T7138 233-234 , denotes ,
T7139 235-236 NNP denotes [
T7140 236-238 CD denotes 37
T7141 238-239 NNP denotes ]
T7142 239-240 . denotes .
R5703 T7097 T7098 nsubj These,induced
R5704 T7098 T7104 advmod induced,release
R5705 T7099 T7098 cc and/or,induced
R5706 T7100 T7098 conj intrinsic,induced
R5707 T7101 T7102 amod apoptotic,cells
R5708 T7102 T7104 nsubj cells,release
R5709 T7103 T7104 aux can,release
R5710 T7104 T7104 ROOT release,release
R5711 T7105 T7106 amod various,types
R5712 T7106 T7104 dobj types,release
R5713 T7107 T7106 prep of,types
R5714 T7108 T7107 pobj DAMPs,of
R5715 T7109 T7110 nsubj that,exert
R5716 T7110 T7108 relcl exert,DAMPs
R5717 T7111 T7113 poss their,properties
R5718 T7112 T7113 compound pro-inflammatory,properties
R5719 T7113 T7110 dobj properties,exert
R5727 T7121 T7123 nmod [,]
R5720 T7114 T7104 prep by,release
R5721 T7115 T7114 pcomp activating,by
R5722 T7116 T7115 dobj DC,activating
R5723 T7117 T7115 prep through,activating
R5724 T7118 T7119 compound pattern,recognition
R5725 T7119 T7120 compound recognition,receptors
R5726 T7120 T7117 pobj receptors,through
R5728 T7122 T7123 nummod 32,]
R5729 T7123 T7120 appos ],receptors
R5730 T7124 T7123 punct ",",]
R5731 T7125 T7127 nmod [,]
R5732 T7126 T7127 nummod 35,]
R5733 T7127 T7123 conj ],]
R5734 T7128 T7127 punct ",",]
R5735 T7129 T7130 amod such,as
R5736 T7130 T7127 prep as,]
R5737 T7131 T7130 pobj HMGB1,as
R5738 T7132 T7104 advcl recognized,release
R5739 T7133 T7132 agent by,recognized
R5740 T7134 T7137 nummod TLR2/4,]
R5741 T7135 T7137 nmod [,]
R5742 T7136 T7137 nummod 36,]
R5743 T7137 T7133 pobj ],by
R5744 T7138 T7137 punct ",",]
R5745 T7139 T7141 nmod [,]
R5746 T7140 T7141 nummod 37,]
R5747 T7141 T7137 appos ],]
R5748 T7142 T7104 punct .,release

GO-MF

Id Subject Object Predicate Lexical cue
T9188 152-181 http://purl.obolibrary.org/obo/GO_0038187 denotes pattern recognition receptors

sentences

Id Subject Object Predicate Lexical cue
T6777 0-240 Sentence denotes These induced and/or intrinsic apoptotic cells can release various types of DAMPs that exert their pro-inflammatory properties by activating DC through pattern recognition receptors [32], [35], such as HMGB1 recognized by TLR2/4 [36], [37].
T142 0-240 Sentence denotes These induced and/or intrinsic apoptotic cells can release various types of DAMPs that exert their pro-inflammatory properties by activating DC through pattern recognition receptors [32], [35], such as HMGB1 recognized by TLR2/4 [36], [37].

events-check-again

Id Subject Object Predicate Lexical cue
T9382 202-207 Protein denotes HMGB1
T9383 208-218 Binding denotes recognized
T9384 222-226 Protein denotes TLR2
T9385 227-228 Protein denotes 4
R7741 T9382 T9383 themeOf HMGB1,recognized
R7743 T9384 T9383 themeOf TLR2,recognized

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T9464 76-81 Protein denotes DAMPs
T9465 202-207 Protein denotes HMGB1
T9466 51-58 Localization denotes release
T9467 208-218 Binding denotes recognized
R7806 T9464 T9466 themeOf DAMPs,release
R7807 T9465 T9467 themeOf HMGB1,recognized

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6694 202-207 Protein denotes HMGB1
T6695 208-218 Binding denotes recognized
T6696 222-226 Protein denotes TLR2
T6697 227-228 Protein denotes 4
R5375 T6694 T6695 themeOf HMGB1,recognized
R5376 T6696 T6695 themeOf TLR2,recognized

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9048 222-226 O60603 denotes TLR2