PMC:3279418 / 1947-2253 JSONTXT

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    2_test

    {"project":"2_test","denotations":[{"id":"22348129-17538631-89575659","span":{"begin":303,"end":304},"obj":"17538631"},{"id":"T64062","span":{"begin":303,"end":304},"obj":"17538631"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    pmc-enju-pas

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allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    bionlp-st-ge-2016-coref

    {"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T1961","span":{"begin":243,"end":247},"obj":"Anaphor"},{"id":"T1962","span":{"begin":50,"end":57},"obj":"Antecedent"},{"id":"T1963","span":{"begin":273,"end":301},"obj":"Anaphor"}],"relations":[{"id":"R1725","pred":"boundBy","subj":"T1963","obj":"T1962"},{"id":"R1724","pred":"boundBy","subj":"T1961","obj":"T1962"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1151","span":{"begin":0,"end":3},"obj":"CD"},{"id":"T1152","span":{"begin":4,"end":11},"obj":"JJ"},{"id":"T1153","span":{"begin":11,"end":12},"obj":","},{"id":"T1154","span":{"begin":13,"end":22},"obj":"JJ"},{"id":"T1155","span":{"begin":23,"end":32},"obj":"JJ"},{"id":"T1156","span":{"begin":33,"end":42},"obj":"NNS"},{"id":"T1157","span":{"begin":43,"end":45},"obj":"IN"},{"id":"T1158","span":{"begin":46,"end":49},"obj":"DT"},{"id":"T1159","span":{"begin":50,"end":57},"obj":"NNP"},{"id":"T1160","span":{"begin":58,"end":62},"obj":"NN"},{"id":"T1161","span":{"begin":63,"end":71},"obj":"VBD"},{"id":"T1162","span":{"begin":72,"end":85},"obj":"RB"},{"id":"T1163","span":{"begin":86,"end":88},"obj":"IN"},{"id":"T1164","span":{"begin":89,"end":92},"obj":"CD"},{"id":"T1165","span":{"begin":93,"end":99},"obj":"JJ"},{"id":"T1166","span":{"begin":100,"end":107},"obj":"NNS"},{"id":"T1167","span":{"begin":108,"end":110},"obj":"IN"},{"id":"T1168","span":{"begin":111,"end":115},"obj":"NNS"},{"id":"T1169","span":{"begin":115,"end":116},"obj":","},{"id":"T1170","span":{"begin":117,"end":154},"obj":"NN"},{"id":"T1171","span":{"begin":155,"end":158},"obj":"CC"},{"id":"T1172","span":{"begin":159,"end":167},"obj":"JJ"},{"id":"T1173","span":{"begin":167,"end":168},"obj":"NN"},{"id":"T1174","span":{"begin":168,"end":203},"obj":"NN"},{"id":"T1175","span":{"begin":203,"end":204},"obj":","},{"id":"T1176","span":{"begin":205,"end":214},"obj":"VBG"},{"id":"T1177","span":{"begin":215,"end":217},"obj":"IN"},{"id":"T1178","span":{"begin":218,"end":227},"obj":"JJ"},{"id":"T1179","span":{"begin":228,"end":239},"obj":"NN"},{"id":"T1180","span":{"begin":240,"end":242},"obj":"IN"},{"id":"T1181","span":{"begin":243,"end":247},"obj":"NNP"},{"id":"T1182","span":{"begin":248,"end":257},"obj":"NN"},{"id":"T1183","span":{"begin":258,"end":261},"obj":"CC"},{"id":"T1184","span":{"begin":262,"end":269},"obj":"NN"},{"id":"T1185","span":{"begin":270,"end":272},"obj":"IN"},{"id":"T1186","span":{"begin":273,"end":274},"obj":"DT"},{"id":"T1187","span":{"begin":275,"end":285},"obj":"JJ"},{"id":"T1188","span":{"begin":286,"end":293},"obj":"NN"},{"id":"T1189","span":{"begin":294,"end":301},"obj":"NN"},{"id":"T1190","span":{"begin":302,"end":303},"obj":"NNP"},{"id":"T1191","span":{"begin":303,"end":304},"obj":"CD"},{"id":"T1192","span":{"begin":304,"end":305},"obj":"NNP"},{"id":"T1193","span":{"begin":305,"end":306},"obj":"."}],"relations":[{"id":"R913","pred":"nummod","subj":"T1151","obj":"T1156"},{"id":"R914","pred":"amod","subj":"T1152","obj":"T1156"},{"id":"R915","pred":"punct","subj":"T1153","obj":"T1156"},{"id":"R916","pred":"amod","subj":"T1154","obj":"T1156"},{"id":"R917","pred":"amod","subj":"T1155","obj":"T1156"},{"id":"R918","pred":"nsubj","subj":"T1156","obj":"T1161"},{"id":"R919","pred":"prep","subj":"T1157","obj":"T1156"},{"id":"R920","pred":"det","subj":"T1158","obj":"T1160"},{"id":"R921","pred":"compound","subj":"T1159","obj":"T1160"},{"id":"R922","pred":"pobj","subj":"T1160","obj":"T1157"},{"id":"R923","pred":"ROOT","subj":"T1161","obj":"T1161"},{"id":"R924","pred":"advmod","subj":"T1162","obj":"T1161"},{"id":"R925","pred":"prep","subj":"T1163","obj":"T1161"},{"id":"R926","pred":"nummod","subj":"T1164","obj":"T1166"},{"id":"R927","pred":"amod","subj":"T1165","obj":"T1166"},{"id":"R928","pred":"pobj","subj":"T1166","obj":"T1163"},{"id":"R929","pred":"prep","subj":"T1167","obj":"T1166"},{"id":"R930","pred":"pobj","subj":"T1168","obj":"T1167"},{"id":"R931","pred":"punct","subj":"T1169","obj":"T1166"},{"id":"R932","pred":"appos","subj":"T1170","obj":"T1166"},{"id":"R933","pred":"cc","subj":"T1171","obj":"T1170"},{"id":"R934","pred":"amod","subj":"T1172","obj":"T1174"},{"id":"R935","pred":"compound","subj":"T1173","obj":"T1174"},{"id":"R936","pred":"conj","subj":"T1174","obj":"T1170"},{"id":"R937","pred":"punct","subj":"T1175","obj":"T1166"},{"id":"R938","pred":"advcl","subj":"T1176","obj":"T1161"},{"id":"R939","pred":"prep","subj":"T1177","obj":"T1176"},{"id":"R940","pred":"amod","subj":"T1178","obj":"T1179"},{"id":"R941","pred":"pobj","subj":"T1179","obj":"T1177"},{"id":"R942","pred":"prep","subj":"T1180","obj":"T1179"},{"id":"R943","pred":"compound","subj":"T1181","obj":"T1182"},{"id":"R944","pred":"pobj","subj":"T1182","obj":"T1180"},{"id":"R945","pred":"cc","subj":"T1183","obj":"T1182"},{"id":"R946","pred":"conj","subj":"T1184","obj":"T1182"},{"id":"R947","pred":"prep","subj":"T1185","obj":"T1184"},{"id":"R948","pred":"det","subj":"T1186","obj":"T1189"},{"id":"R949","pred":"amod","subj":"T1187","obj":"T1188"},{"id":"R950","pred":"compound","subj":"T1188","obj":"T1189"},{"id":"R951","pred":"pobj","subj":"T1189","obj":"T1185"},{"id":"R952","pred":"nmod","subj":"T1190","obj":"T1192"},{"id":"R953","pred":"nummod","subj":"T1191","obj":"T1192"},{"id":"R954","pred":"dobj","subj":"T1192","obj":"T1176"},{"id":"R955","pred":"punct","subj":"T1193","obj":"T1161"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1993","span":{"begin":243,"end":257},"obj":"http://purl.obolibrary.org/obo/GO_0009299"},{"id":"T1994","span":{"begin":248,"end":257},"obj":"http://purl.obolibrary.org/obo/GO_0009058"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    sentences

    {"project":"sentences","denotations":[{"id":"T979","span":{"begin":0,"end":306},"obj":"Sentence"},{"id":"T15","span":{"begin":0,"end":306},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T2109","span":{"begin":23,"end":42},"obj":"Negative_regulation"},{"id":"T2110","span":{"begin":50,"end":57},"obj":"Protein"},{"id":"T2111","span":{"begin":205,"end":214},"obj":"Positive_regulation"},{"id":"T2112","span":{"begin":205,"end":214},"obj":"Positive_regulation"},{"id":"T2113","span":{"begin":228,"end":239},"obj":"Negative_regulation"},{"id":"T2114","span":{"begin":248,"end":257},"obj":"Transcription"},{"id":"T2115","span":{"begin":262,"end":269},"obj":"Negative_regulation"}],"relations":[{"id":"R1758","pred":"causeOf","subj":"T2109","obj":"T2112"},{"id":"R1762","pred":"themeOf","subj":"T2110","obj":"T2115"},{"id":"R1763","pred":"themeOf","subj":"T2110","obj":"T2114"},{"id":"R1767","pred":"themeOf","subj":"T2115","obj":"T2112"},{"id":"R1761","pred":"causeOf","subj":"T2109","obj":"T2111"},{"id":"R1764","pred":"themeOf","subj":"T2110","obj":"T2109"},{"id":"R1765","pred":"themeOf","subj":"T2113","obj":"T2111"},{"id":"R1766","pred":"themeOf","subj":"T2114","obj":"T2113"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2137","span":{"begin":50,"end":62},"obj":"Protein"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T952","span":{"begin":23,"end":42},"obj":"Negative_regulation"},{"id":"T953","span":{"begin":50,"end":57},"obj":"Protein"},{"id":"T954","span":{"begin":205,"end":214},"obj":"Positive_regulation"},{"id":"T955","span":{"begin":205,"end":214},"obj":"Positive_regulation"},{"id":"T956","span":{"begin":228,"end":239},"obj":"Negative_regulation"},{"id":"T957","span":{"begin":248,"end":257},"obj":"Transcription"},{"id":"T958","span":{"begin":262,"end":269},"obj":"Negative_regulation"}],"relations":[{"id":"R746","pred":"themeOf","subj":"T956","obj":"T954"},{"id":"R747","pred":"themeOf","subj":"T957","obj":"T956"},{"id":"R748","pred":"themeOf","subj":"T958","obj":"T955"},{"id":"R741","pred":"causeOf","subj":"T952","obj":"T955"},{"id":"R742","pred":"causeOf","subj":"T952","obj":"T954"},{"id":"R743","pred":"themeOf","subj":"T953","obj":"T958"},{"id":"R744","pred":"themeOf","subj":"T953","obj":"T957"},{"id":"R745","pred":"themeOf","subj":"T953","obj":"T952"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1965","span":{"begin":50,"end":57},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}

    test2

    {"project":"test2","denotations":[{"id":"T926","span":{"begin":50,"end":57},"obj":"Protein"}],"text":"Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]."}