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PMC:3279418 / 1947-2253 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22348129-17538631-89575659 303-304 17538631 denotes 2
T64062 303-304 17538631 denotes 2

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1519 0-3 CD denotes Two
T1520 4-11 JJ denotes allelic
T1521 11-12 -COMMA- denotes ,
T1522 13-22 JJ denotes autosomal
T1523 23-32 JJ denotes recessive
T1524 33-42 NN denotes mutations
T1525 43-45 IN denotes in
T1526 46-49 DT denotes the
T1527 50-57 NN denotes Sharpin
T1528 58-62 NN denotes gene
T1529 63-71 VB denotes occurred
T1530 72-85 RB denotes spontaneously
T1531 86-88 IN denotes in
T1532 89-92 CD denotes two
T1533 93-99 JJ denotes inbred
T1534 100-107 NN denotes strains
T1535 108-110 IN denotes of
T1536 111-115 NN denotes mice
T1537 115-116 -COMMA- denotes ,
T1538 117-154 NN denotes C57B/KaLawRij-Sharpincpdm/Sharpincpdm
T1539 155-158 CC denotes and
T1540 159-203 NN denotes CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem
T1541 203-204 -COMMA- denotes ,
T1542 205-214 VB denotes resulting
T1543 215-217 IN denotes in
T1544 218-227 JJ denotes premature
T1545 228-239 NN denotes termination
T1546 240-242 IN denotes of
T1547 243-247 NN denotes mRNA
T1548 248-257 NN denotes synthesis
T1549 258-261 CC denotes and
T1550 262-269 NN denotes absence
T1551 270-272 IN denotes of
T1552 273-274 DT denotes a
T1553 275-285 JJ denotes functional
T1554 286-293 NN denotes protein
T1555 294-301 NN denotes product
T1556 302-303 -LRB- denotes [
T1557 303-304 CD denotes 2
T1558 304-305 -RRB- denotes ]
R1282 T1520 T1521 arg1Of allelic,","
R1283 T1522 T1521 arg2Of autosomal,","
R1284 T1524 T1519 arg1Of mutations,Two
R1285 T1524 T1520 arg1Of mutations,allelic
R1286 T1524 T1522 arg1Of mutations,autosomal
R1287 T1524 T1523 arg1Of mutations,recessive
R1288 T1524 T1525 arg1Of mutations,in
R1289 T1524 T1529 arg1Of mutations,occurred
R1290 T1528 T1525 arg2Of gene,in
R1291 T1528 T1526 arg1Of gene,the
R1292 T1528 T1527 arg1Of gene,Sharpin
R1293 T1529 T1530 arg1Of occurred,spontaneously
R1294 T1529 T1531 arg1Of occurred,in
R1295 T1529 T1541 arg1Of occurred,","
R1296 T1529 T1542 modOf occurred,resulting
R1297 T1529 T1556 arg1Of occurred,[
R1298 T1534 T1531 arg2Of strains,in
R1299 T1534 T1532 arg1Of strains,two
R1300 T1534 T1533 arg1Of strains,inbred
R1301 T1534 T1535 arg1Of strains,of
R1302 T1534 T1537 arg1Of strains,","
R1303 T1536 T1535 arg2Of mice,of
R1304 T1538 T1539 arg1Of C57B/KaLawRij-Sharpincpdm/Sharpincpdm,and
R1305 T1539 T1537 arg2Of and,","
R1306 T1540 T1539 arg2Of CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem,and
R1307 T1542 T1543 arg1Of resulting,in
R1308 T1545 T1544 arg1Of termination,premature
R1309 T1545 T1546 arg1Of termination,of
R1310 T1545 T1549 arg1Of termination,and
R1311 T1548 T1546 arg2Of synthesis,of
R1312 T1548 T1547 arg1Of synthesis,mRNA
R1313 T1549 T1543 arg2Of and,in
R1314 T1550 T1549 arg2Of absence,and
R1315 T1550 T1551 arg1Of absence,of
R1316 T1555 T1551 arg2Of product,of
R1317 T1555 T1552 arg1Of product,a
R1318 T1555 T1553 arg1Of product,functional
R1319 T1555 T1554 arg1Of product,protein
R1320 T1557 T1556 arg2Of 2,[
R1321 T1558 T1556 arg3Of ],[

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T1961 243-247 Anaphor denotes mRNA
T1962 50-57 Antecedent denotes Sharpin
T1963 273-301 Anaphor denotes a functional protein product
R1725 T1963 T1962 boundBy a functional protein product,Sharpin
R1724 T1961 T1962 boundBy mRNA,Sharpin

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1151 0-3 CD denotes Two
T1152 4-11 JJ denotes allelic
T1153 11-12 , denotes ,
T1154 13-22 JJ denotes autosomal
T1155 23-32 JJ denotes recessive
T1156 33-42 NNS denotes mutations
T1157 43-45 IN denotes in
T1158 46-49 DT denotes the
T1159 50-57 NNP denotes Sharpin
T1160 58-62 NN denotes gene
T1161 63-71 VBD denotes occurred
T1162 72-85 RB denotes spontaneously
T1163 86-88 IN denotes in
T1164 89-92 CD denotes two
T1165 93-99 JJ denotes inbred
T1166 100-107 NNS denotes strains
T1167 108-110 IN denotes of
T1168 111-115 NNS denotes mice
T1169 115-116 , denotes ,
T1170 117-154 NN denotes C57B/KaLawRij-Sharpincpdm/Sharpincpdm
T1171 155-158 CC denotes and
T1172 159-167 JJ denotes CBy.Ocb3
T1173 167-168 NN denotes /
T1174 168-203 NN denotes Dem-Sharpincpdm-Dem/Sharpincpdm-Dem
T1175 203-204 , denotes ,
T1176 205-214 VBG denotes resulting
T1177 215-217 IN denotes in
T1178 218-227 JJ denotes premature
T1179 228-239 NN denotes termination
T1180 240-242 IN denotes of
T1181 243-247 NNP denotes mRNA
T1182 248-257 NN denotes synthesis
T1183 258-261 CC denotes and
T1184 262-269 NN denotes absence
T1185 270-272 IN denotes of
T1186 273-274 DT denotes a
T1187 275-285 JJ denotes functional
T1188 286-293 NN denotes protein
T1189 294-301 NN denotes product
T1190 302-303 NNP denotes [
T1191 303-304 CD denotes 2
T1192 304-305 NNP denotes ]
T1193 305-306 . denotes .
R913 T1151 T1156 nummod Two,mutations
R914 T1152 T1156 amod allelic,mutations
R915 T1153 T1156 punct ",",mutations
R916 T1154 T1156 amod autosomal,mutations
R917 T1155 T1156 amod recessive,mutations
R918 T1156 T1161 nsubj mutations,occurred
R919 T1157 T1156 prep in,mutations
R920 T1158 T1160 det the,gene
R921 T1159 T1160 compound Sharpin,gene
R922 T1160 T1157 pobj gene,in
R923 T1161 T1161 ROOT occurred,occurred
R924 T1162 T1161 advmod spontaneously,occurred
R925 T1163 T1161 prep in,occurred
R926 T1164 T1166 nummod two,strains
R927 T1165 T1166 amod inbred,strains
R928 T1166 T1163 pobj strains,in
R929 T1167 T1166 prep of,strains
R930 T1168 T1167 pobj mice,of
R931 T1169 T1166 punct ",",strains
R932 T1170 T1166 appos C57B/KaLawRij-Sharpincpdm/Sharpincpdm,strains
R933 T1171 T1170 cc and,C57B/KaLawRij-Sharpincpdm/Sharpincpdm
R934 T1172 T1174 amod CBy.Ocb3,Dem-Sharpincpdm-Dem/Sharpincpdm-Dem
R935 T1173 T1174 compound /,Dem-Sharpincpdm-Dem/Sharpincpdm-Dem
R936 T1174 T1170 conj Dem-Sharpincpdm-Dem/Sharpincpdm-Dem,C57B/KaLawRij-Sharpincpdm/Sharpincpdm
R937 T1175 T1166 punct ",",strains
R938 T1176 T1161 advcl resulting,occurred
R939 T1177 T1176 prep in,resulting
R940 T1178 T1179 amod premature,termination
R941 T1179 T1177 pobj termination,in
R942 T1180 T1179 prep of,termination
R943 T1181 T1182 compound mRNA,synthesis
R944 T1182 T1180 pobj synthesis,of
R945 T1183 T1182 cc and,synthesis
R946 T1184 T1182 conj absence,synthesis
R947 T1185 T1184 prep of,absence
R948 T1186 T1189 det a,product
R949 T1187 T1188 amod functional,protein
R950 T1188 T1189 compound protein,product
R951 T1189 T1185 pobj product,of
R952 T1190 T1192 nmod [,]
R953 T1191 T1192 nummod 2,]
R954 T1192 T1176 dobj ],resulting
R955 T1193 T1161 punct .,occurred

GO-BP

Id Subject Object Predicate Lexical cue
T1993 243-257 http://purl.obolibrary.org/obo/GO_0009299 denotes mRNA synthesis
T1994 248-257 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis

sentences

Id Subject Object Predicate Lexical cue
T979 0-306 Sentence denotes Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2].
T15 0-306 Sentence denotes Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2].

events-check-again

Id Subject Object Predicate Lexical cue
T2109 23-42 Negative_regulation denotes recessive mutations
T2110 50-57 Protein denotes Sharpin
T2111 205-214 Positive_regulation denotes resulting
T2112 205-214 Positive_regulation denotes resulting
T2113 228-239 Negative_regulation denotes termination
T2114 248-257 Transcription denotes synthesis
T2115 262-269 Negative_regulation denotes absence
R1758 T2109 T2112 causeOf recessive mutations,resulting
R1762 T2110 T2115 themeOf Sharpin,absence
R1763 T2110 T2114 themeOf Sharpin,synthesis
R1767 T2115 T2112 themeOf absence,resulting
R1761 T2109 T2111 causeOf recessive mutations,resulting
R1764 T2110 T2109 themeOf Sharpin,recessive mutations
R1765 T2113 T2111 themeOf termination,resulting
R1766 T2114 T2113 themeOf synthesis,termination

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2137 50-62 Protein denotes Sharpin gene

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T952 23-42 Negative_regulation denotes recessive mutations
T953 50-57 Protein denotes Sharpin
T954 205-214 Positive_regulation denotes resulting
T955 205-214 Positive_regulation denotes resulting
T956 228-239 Negative_regulation denotes termination
T957 248-257 Transcription denotes synthesis
T958 262-269 Negative_regulation denotes absence
R746 T956 T954 themeOf termination,resulting
R747 T957 T956 themeOf synthesis,termination
R748 T958 T955 themeOf absence,resulting
R741 T952 T955 causeOf recessive mutations,resulting
R742 T952 T954 causeOf recessive mutations,resulting
R743 T953 T958 themeOf Sharpin,absence
R744 T953 T957 themeOf Sharpin,synthesis
R745 T953 T952 themeOf Sharpin,recessive mutations

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1965 50-57 Q9H0F6 denotes Sharpin

test2

Id Subject Object Predicate Lexical cue
T926 50-57 Protein denotes Sharpin