PMC:3279418 / 1947-2253
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
22348129-17538631-89575659 | 303-304 | 17538631 | denotes | 2 |
T64062 | 303-304 | 17538631 | denotes | 2 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1519 | 0-3 | CD | denotes | Two |
T1520 | 4-11 | JJ | denotes | allelic |
T1521 | 11-12 | -COMMA- | denotes | , |
T1522 | 13-22 | JJ | denotes | autosomal |
T1523 | 23-32 | JJ | denotes | recessive |
T1524 | 33-42 | NN | denotes | mutations |
T1525 | 43-45 | IN | denotes | in |
T1526 | 46-49 | DT | denotes | the |
T1527 | 50-57 | NN | denotes | Sharpin |
T1528 | 58-62 | NN | denotes | gene |
T1529 | 63-71 | VB | denotes | occurred |
T1530 | 72-85 | RB | denotes | spontaneously |
T1531 | 86-88 | IN | denotes | in |
T1532 | 89-92 | CD | denotes | two |
T1533 | 93-99 | JJ | denotes | inbred |
T1534 | 100-107 | NN | denotes | strains |
T1535 | 108-110 | IN | denotes | of |
T1536 | 111-115 | NN | denotes | mice |
T1537 | 115-116 | -COMMA- | denotes | , |
T1538 | 117-154 | NN | denotes | C57B/KaLawRij-Sharpincpdm/Sharpincpdm |
T1539 | 155-158 | CC | denotes | and |
T1540 | 159-203 | NN | denotes | CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem |
T1541 | 203-204 | -COMMA- | denotes | , |
T1542 | 205-214 | VB | denotes | resulting |
T1543 | 215-217 | IN | denotes | in |
T1544 | 218-227 | JJ | denotes | premature |
T1545 | 228-239 | NN | denotes | termination |
T1546 | 240-242 | IN | denotes | of |
T1547 | 243-247 | NN | denotes | mRNA |
T1548 | 248-257 | NN | denotes | synthesis |
T1549 | 258-261 | CC | denotes | and |
T1550 | 262-269 | NN | denotes | absence |
T1551 | 270-272 | IN | denotes | of |
T1552 | 273-274 | DT | denotes | a |
T1553 | 275-285 | JJ | denotes | functional |
T1554 | 286-293 | NN | denotes | protein |
T1555 | 294-301 | NN | denotes | product |
T1556 | 302-303 | -LRB- | denotes | [ |
T1557 | 303-304 | CD | denotes | 2 |
T1558 | 304-305 | -RRB- | denotes | ] |
R1282 | T1520 | T1521 | arg1Of | allelic,"," |
R1283 | T1522 | T1521 | arg2Of | autosomal,"," |
R1284 | T1524 | T1519 | arg1Of | mutations,Two |
R1285 | T1524 | T1520 | arg1Of | mutations,allelic |
R1286 | T1524 | T1522 | arg1Of | mutations,autosomal |
R1287 | T1524 | T1523 | arg1Of | mutations,recessive |
R1288 | T1524 | T1525 | arg1Of | mutations,in |
R1289 | T1524 | T1529 | arg1Of | mutations,occurred |
R1290 | T1528 | T1525 | arg2Of | gene,in |
R1291 | T1528 | T1526 | arg1Of | gene,the |
R1292 | T1528 | T1527 | arg1Of | gene,Sharpin |
R1293 | T1529 | T1530 | arg1Of | occurred,spontaneously |
R1294 | T1529 | T1531 | arg1Of | occurred,in |
R1295 | T1529 | T1541 | arg1Of | occurred,"," |
R1296 | T1529 | T1542 | modOf | occurred,resulting |
R1297 | T1529 | T1556 | arg1Of | occurred,[ |
R1298 | T1534 | T1531 | arg2Of | strains,in |
R1299 | T1534 | T1532 | arg1Of | strains,two |
R1300 | T1534 | T1533 | arg1Of | strains,inbred |
R1301 | T1534 | T1535 | arg1Of | strains,of |
R1302 | T1534 | T1537 | arg1Of | strains,"," |
R1303 | T1536 | T1535 | arg2Of | mice,of |
R1304 | T1538 | T1539 | arg1Of | C57B/KaLawRij-Sharpincpdm/Sharpincpdm,and |
R1305 | T1539 | T1537 | arg2Of | and,"," |
R1306 | T1540 | T1539 | arg2Of | CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem,and |
R1307 | T1542 | T1543 | arg1Of | resulting,in |
R1308 | T1545 | T1544 | arg1Of | termination,premature |
R1309 | T1545 | T1546 | arg1Of | termination,of |
R1310 | T1545 | T1549 | arg1Of | termination,and |
R1311 | T1548 | T1546 | arg2Of | synthesis,of |
R1312 | T1548 | T1547 | arg1Of | synthesis,mRNA |
R1313 | T1549 | T1543 | arg2Of | and,in |
R1314 | T1550 | T1549 | arg2Of | absence,and |
R1315 | T1550 | T1551 | arg1Of | absence,of |
R1316 | T1555 | T1551 | arg2Of | product,of |
R1317 | T1555 | T1552 | arg1Of | product,a |
R1318 | T1555 | T1553 | arg1Of | product,functional |
R1319 | T1555 | T1554 | arg1Of | product,protein |
R1320 | T1557 | T1556 | arg2Of | 2,[ |
R1321 | T1558 | T1556 | arg3Of | ],[ |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1961 | 243-247 | Anaphor | denotes | mRNA |
T1962 | 50-57 | Antecedent | denotes | Sharpin |
T1963 | 273-301 | Anaphor | denotes | a functional protein product |
R1725 | T1963 | T1962 | boundBy | a functional protein product,Sharpin |
R1724 | T1961 | T1962 | boundBy | mRNA,Sharpin |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1151 | 0-3 | CD | denotes | Two |
T1152 | 4-11 | JJ | denotes | allelic |
T1153 | 11-12 | , | denotes | , |
T1154 | 13-22 | JJ | denotes | autosomal |
T1155 | 23-32 | JJ | denotes | recessive |
T1156 | 33-42 | NNS | denotes | mutations |
T1157 | 43-45 | IN | denotes | in |
T1158 | 46-49 | DT | denotes | the |
T1159 | 50-57 | NNP | denotes | Sharpin |
T1160 | 58-62 | NN | denotes | gene |
T1161 | 63-71 | VBD | denotes | occurred |
T1162 | 72-85 | RB | denotes | spontaneously |
T1163 | 86-88 | IN | denotes | in |
T1164 | 89-92 | CD | denotes | two |
T1165 | 93-99 | JJ | denotes | inbred |
T1166 | 100-107 | NNS | denotes | strains |
T1167 | 108-110 | IN | denotes | of |
T1168 | 111-115 | NNS | denotes | mice |
T1169 | 115-116 | , | denotes | , |
T1170 | 117-154 | NN | denotes | C57B/KaLawRij-Sharpincpdm/Sharpincpdm |
T1171 | 155-158 | CC | denotes | and |
T1172 | 159-167 | JJ | denotes | CBy.Ocb3 |
T1173 | 167-168 | NN | denotes | / |
T1174 | 168-203 | NN | denotes | Dem-Sharpincpdm-Dem/Sharpincpdm-Dem |
T1175 | 203-204 | , | denotes | , |
T1176 | 205-214 | VBG | denotes | resulting |
T1177 | 215-217 | IN | denotes | in |
T1178 | 218-227 | JJ | denotes | premature |
T1179 | 228-239 | NN | denotes | termination |
T1180 | 240-242 | IN | denotes | of |
T1181 | 243-247 | NNP | denotes | mRNA |
T1182 | 248-257 | NN | denotes | synthesis |
T1183 | 258-261 | CC | denotes | and |
T1184 | 262-269 | NN | denotes | absence |
T1185 | 270-272 | IN | denotes | of |
T1186 | 273-274 | DT | denotes | a |
T1187 | 275-285 | JJ | denotes | functional |
T1188 | 286-293 | NN | denotes | protein |
T1189 | 294-301 | NN | denotes | product |
T1190 | 302-303 | NNP | denotes | [ |
T1191 | 303-304 | CD | denotes | 2 |
T1192 | 304-305 | NNP | denotes | ] |
T1193 | 305-306 | . | denotes | . |
R913 | T1151 | T1156 | nummod | Two,mutations |
R914 | T1152 | T1156 | amod | allelic,mutations |
R915 | T1153 | T1156 | punct | ",",mutations |
R916 | T1154 | T1156 | amod | autosomal,mutations |
R917 | T1155 | T1156 | amod | recessive,mutations |
R918 | T1156 | T1161 | nsubj | mutations,occurred |
R919 | T1157 | T1156 | prep | in,mutations |
R920 | T1158 | T1160 | det | the,gene |
R921 | T1159 | T1160 | compound | Sharpin,gene |
R922 | T1160 | T1157 | pobj | gene,in |
R923 | T1161 | T1161 | ROOT | occurred,occurred |
R924 | T1162 | T1161 | advmod | spontaneously,occurred |
R925 | T1163 | T1161 | prep | in,occurred |
R926 | T1164 | T1166 | nummod | two,strains |
R927 | T1165 | T1166 | amod | inbred,strains |
R928 | T1166 | T1163 | pobj | strains,in |
R929 | T1167 | T1166 | prep | of,strains |
R930 | T1168 | T1167 | pobj | mice,of |
R931 | T1169 | T1166 | punct | ",",strains |
R932 | T1170 | T1166 | appos | C57B/KaLawRij-Sharpincpdm/Sharpincpdm,strains |
R933 | T1171 | T1170 | cc | and,C57B/KaLawRij-Sharpincpdm/Sharpincpdm |
R934 | T1172 | T1174 | amod | CBy.Ocb3,Dem-Sharpincpdm-Dem/Sharpincpdm-Dem |
R935 | T1173 | T1174 | compound | /,Dem-Sharpincpdm-Dem/Sharpincpdm-Dem |
R936 | T1174 | T1170 | conj | Dem-Sharpincpdm-Dem/Sharpincpdm-Dem,C57B/KaLawRij-Sharpincpdm/Sharpincpdm |
R937 | T1175 | T1166 | punct | ",",strains |
R938 | T1176 | T1161 | advcl | resulting,occurred |
R939 | T1177 | T1176 | prep | in,resulting |
R940 | T1178 | T1179 | amod | premature,termination |
R941 | T1179 | T1177 | pobj | termination,in |
R942 | T1180 | T1179 | prep | of,termination |
R943 | T1181 | T1182 | compound | mRNA,synthesis |
R944 | T1182 | T1180 | pobj | synthesis,of |
R945 | T1183 | T1182 | cc | and,synthesis |
R946 | T1184 | T1182 | conj | absence,synthesis |
R947 | T1185 | T1184 | prep | of,absence |
R948 | T1186 | T1189 | det | a,product |
R949 | T1187 | T1188 | amod | functional,protein |
R950 | T1188 | T1189 | compound | protein,product |
R951 | T1189 | T1185 | pobj | product,of |
R952 | T1190 | T1192 | nmod | [,] |
R953 | T1191 | T1192 | nummod | 2,] |
R954 | T1192 | T1176 | dobj | ],resulting |
R955 | T1193 | T1161 | punct | .,occurred |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1993 | 243-257 | http://purl.obolibrary.org/obo/GO_0009299 | denotes | mRNA synthesis |
T1994 | 248-257 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T979 | 0-306 | Sentence | denotes | Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]. |
T15 | 0-306 | Sentence | denotes | Two allelic, autosomal recessive mutations in the Sharpin gene occurred spontaneously in two inbred strains of mice, C57B/KaLawRij-Sharpincpdm/Sharpincpdm and CBy.Ocb3/Dem-Sharpincpdm-Dem/Sharpincpdm-Dem, resulting in premature termination of mRNA synthesis and absence of a functional protein product [2]. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2109 | 23-42 | Negative_regulation | denotes | recessive mutations |
T2110 | 50-57 | Protein | denotes | Sharpin |
T2111 | 205-214 | Positive_regulation | denotes | resulting |
T2112 | 205-214 | Positive_regulation | denotes | resulting |
T2113 | 228-239 | Negative_regulation | denotes | termination |
T2114 | 248-257 | Transcription | denotes | synthesis |
T2115 | 262-269 | Negative_regulation | denotes | absence |
R1758 | T2109 | T2112 | causeOf | recessive mutations,resulting |
R1762 | T2110 | T2115 | themeOf | Sharpin,absence |
R1763 | T2110 | T2114 | themeOf | Sharpin,synthesis |
R1767 | T2115 | T2112 | themeOf | absence,resulting |
R1761 | T2109 | T2111 | causeOf | recessive mutations,resulting |
R1764 | T2110 | T2109 | themeOf | Sharpin,recessive mutations |
R1765 | T2113 | T2111 | themeOf | termination,resulting |
R1766 | T2114 | T2113 | themeOf | synthesis,termination |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2137 | 50-62 | Protein | denotes | Sharpin gene |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T952 | 23-42 | Negative_regulation | denotes | recessive mutations |
T953 | 50-57 | Protein | denotes | Sharpin |
T954 | 205-214 | Positive_regulation | denotes | resulting |
T955 | 205-214 | Positive_regulation | denotes | resulting |
T956 | 228-239 | Negative_regulation | denotes | termination |
T957 | 248-257 | Transcription | denotes | synthesis |
T958 | 262-269 | Negative_regulation | denotes | absence |
R746 | T956 | T954 | themeOf | termination,resulting |
R747 | T957 | T956 | themeOf | synthesis,termination |
R748 | T958 | T955 | themeOf | absence,resulting |
R741 | T952 | T955 | causeOf | recessive mutations,resulting |
R742 | T952 | T954 | causeOf | recessive mutations,resulting |
R743 | T953 | T958 | themeOf | Sharpin,absence |
R744 | T953 | T957 | themeOf | Sharpin,synthesis |
R745 | T953 | T952 | themeOf | Sharpin,recessive mutations |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1965 | 50-57 | Q9H0F6 | denotes | Sharpin |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T926 | 50-57 | Protein | denotes | Sharpin |