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PMC:3279418 / 189-495 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T420 1-4 DT denotes the
T421 5-12 NNP denotes Sharpin
T422 13-14 -LRB- denotes (
T423 14-30 JJ denotes SHANK-associated
T424 31-33 NN denotes RH
T425 34-52 JJ denotes domain-interacting
T426 53-60 NN denotes protein
T427 60-61 -COMMA- denotes ,
T428 62-67 JJ denotes other
T429 68-75 NN denotes aliases
T430 75-76 -COLON- denotes :
T431 77-83 NN denotes Rbckl1
T432 83-84 -COMMA- denotes ,
T433 85-90 NN denotes Sipl1
T434 90-91 -RRB- denotes )
T435 92-96 NN denotes gene
T436 97-99 IN denotes in
T437 100-104 NN denotes mice
T438 105-111 VB denotes result
T439 112-114 IN denotes in
T440 115-123 JJ denotes systemic
T441 124-136 NN denotes inflammation
T442 137-141 WDT denotes that
T443 142-144 VB denotes is
T444 145-158 VB denotes characterized
T445 159-161 IN denotes by
T446 162-169 JJ denotes chronic
T447 170-183 JJ denotes proliferative
T448 184-194 NN denotes dermatitis
T449 195-198 CC denotes and
T450 199-211 VB denotes dysregulated
T451 212-221 NN denotes secretion
T452 222-224 IN denotes of
T453 225-226 NN denotes T
T454 227-234 NN denotes helper1
T455 235-236 -LRB- denotes (
T456 236-239 NN denotes Th1
T457 239-240 -RRB- denotes )
T458 241-244 CC denotes and
T459 245-248 NN denotes Th2
T460 249-258 NN denotes cytokines
T461 260-263 DT denotes The
T462 264-272 JJ denotes cellular
T463 273-276 CC denotes and
T464 277-286 JJ denotes molecular
T465 287-297 NN denotes mechanisms
R336 T426 T420 arg1Of protein,the
R337 T426 T421 arg1Of protein,Sharpin
R338 T426 T422 arg1Of protein,(
R339 T426 T423 arg1Of protein,SHANK-associated
R340 T426 T424 arg1Of protein,RH
R341 T426 T425 arg1Of protein,domain-interacting
R342 T426 T427 arg1Of protein,","
R343 T429 T427 arg2Of aliases,","
R344 T429 T428 arg1Of aliases,other
R345 T429 T430 arg1Of aliases,:
R346 T431 T432 arg1Of Rbckl1,","
R347 T431 T438 arg1Of Rbckl1,result
R348 T433 T432 arg2Of Sipl1,","
R349 T433 T434 arg1Of Sipl1,)
R350 T433 T435 arg1Of Sipl1,gene
R351 T433 T436 arg1Of Sipl1,in
R352 T437 T436 arg2Of mice,in
R353 T438 T439 arg1Of result,in
R354 T441 T439 arg2Of inflammation,in
R355 T441 T440 arg1Of inflammation,systemic
R356 T441 T442 arg1Of inflammation,that
R357 T441 T443 arg1Of inflammation,is
R358 T441 T444 arg2Of inflammation,characterized
R359 T444 T443 arg2Of characterized,is
R360 T448 T446 arg1Of dermatitis,chronic
R361 T448 T447 arg1Of dermatitis,proliferative
R362 T448 T449 arg1Of dermatitis,and
R363 T449 T444 arg1Of and,characterized
R364 T449 T445 arg2Of and,by
R365 T451 T449 arg2Of secretion,and
R366 T451 T450 arg2Of secretion,dysregulated
R367 T451 T452 arg1Of secretion,of
R368 T454 T453 arg1Of helper1,T
R369 T454 T455 arg1Of helper1,(
R370 T454 T458 arg1Of helper1,and
R371 T456 T455 arg2Of Th1,(
R372 T457 T455 arg3Of ),(
R373 T459 T458 arg2Of Th2,and
R374 T460 T452 arg2Of cytokines,of
R375 T460 T454 arg1Of cytokines,helper1
R376 T460 T459 arg1Of cytokines,Th2
R377 T462 T463 arg1Of cellular,and
R378 T464 T463 arg2Of molecular,and
R379 T465 T461 arg1Of mechanisms,The
R380 T465 T462 arg1Of mechanisms,cellular
R381 T465 T464 arg1Of mechanisms,molecular

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T139 1-4 DT denotes the
T140 5-12 NNP denotes Sharpin
T141 13-14 -LRB- denotes (
T142 14-30 JJ denotes SHANK-associated
T143 31-33 NNP denotes RH
T144 34-52 NN denotes domain-interacting
T145 53-60 NN denotes protein
T146 60-61 , denotes ,
T147 62-67 JJ denotes other
T148 68-75 NNS denotes aliases
T149 75-76 : denotes :
T150 77-83 NNS denotes Rbckl1
T151 83-84 , denotes ,
T152 85-90 NNP denotes Sipl1
T153 90-91 -RRB- denotes )
T154 92-96 NN denotes gene
T155 97-99 IN denotes in
T156 100-104 NNS denotes mice
T157 105-111 VBP denotes result
T158 112-114 IN denotes in
T159 115-123 JJ denotes systemic
T160 124-136 NN denotes inflammation
T161 137-141 WDT denotes that
T162 142-144 VBZ denotes is
T163 145-158 VBN denotes characterized
T164 159-161 IN denotes by
T165 162-169 JJ denotes chronic
T166 170-183 JJ denotes proliferative
T167 184-194 NN denotes dermatitis
T168 195-198 CC denotes and
T169 199-211 VBD denotes dysregulated
T170 212-221 NN denotes secretion
T171 222-224 IN denotes of
T172 225-226 NNP denotes T
T173 227-234 CD denotes helper1
T174 235-236 -LRB- denotes (
T175 236-239 NN denotes Th1
T176 239-240 -RRB- denotes )
T177 241-244 CC denotes and
T178 245-248 JJ denotes Th2
T179 249-258 NNS denotes cytokines
T180 258-259 . denotes .
T181 260-263 DT denotes The
T182 264-272 JJ denotes cellular
T183 273-276 CC denotes and
T184 277-286 JJ denotes molecular
T185 287-297 NNS denotes mechanisms
R71 T155 T154 prep in,gene
R72 T156 T155 pobj mice,in
R74 T158 T157 prep in,result
R75 T159 T160 amod systemic,inflammation
R76 T160 T158 pobj inflammation,in
R77 T161 T163 nsubjpass that,characterized
R78 T162 T163 auxpass is,characterized
R79 T163 T160 relcl characterized,inflammation
R80 T164 T163 agent by,characterized
R81 T165 T167 amod chronic,dermatitis
R82 T166 T167 compound proliferative,dermatitis
R83 T167 T164 pobj dermatitis,by
R84 T168 T167 cc and,dermatitis
R85 T169 T170 amod dysregulated,secretion
R86 T170 T167 conj secretion,dermatitis
R87 T171 T170 prep of,secretion
R88 T172 T173 compound T,helper1
R89 T173 T171 pobj helper1,of
R90 T174 T175 punct (,Th1
R91 T175 T170 appos Th1,secretion
R92 T176 T175 punct ),Th1
R93 T177 T170 cc and,secretion
R94 T178 T179 amod Th2,cytokines
R95 T179 T170 conj cytokines,secretion
R96 T180 T157 punct .,result
R97 T181 T185 det The,mechanisms
R98 T182 T185 amod cellular,mechanisms
R99 T183 T182 cc and,cellular
R100 T184 T182 conj molecular,cellular
R55 T139 T140 det the,Sharpin
R57 T141 T145 punct (,protein
R58 T142 T145 amod SHANK-associated,protein
R59 T143 T145 compound RH,protein
R60 T144 T145 compound domain-interacting,protein
R61 T145 T140 appos protein,Sharpin
R62 T146 T148 punct ",",aliases
R63 T147 T148 amod other,aliases
R65 T149 T148 punct :,aliases
R66 T150 T148 conj Rbckl1,aliases
R67 T151 T150 punct ",",Rbckl1
R68 T152 T154 nmod Sipl1,gene
R69 T153 T152 punct ),Sipl1
R70 T154 T157 nsubj gene,result

GO-BP

Id Subject Object Predicate Lexical cue
T701 124-136 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T703 212-221 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T705 264-272 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular

sentences

Id Subject Object Predicate Lexical cue
T109 77-259 Sentence denotes Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines.
T4 77-259 Sentence denotes Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines.

ICD10

Id Subject Object Predicate Lexical cue
T723 184-194 http://purl.bioontology.org/ontology/ICD10/L30.9 denotes dermatitis

events-check-again

Id Subject Object Predicate Lexical cue
T804 5-12 Protein denotes Sharpin
T805 14-60 Protein denotes SHANK-associated RH domain-interacting protein
T806 77-83 Protein denotes Rbckl1
T807 85-90 Protein denotes Sipl1
R695 T805 T804 equivalentTo SHANK-associated RH domain-interacting protein,Sharpin
R696 T806 T804 equivalentTo Rbckl1,Sharpin
R697 T807 T804 equivalentTo Sipl1,Sharpin

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T840 5-12 Protein denotes Sharpin
T841 14-19 Protein denotes SHANK
T842 31-33 Protein denotes RH
T843 77-83 Protein denotes Rbckl1
T844 85-90 Protein denotes Sipl1
T845 225-234 Protein denotes T helper1
T846 236-239 Protein denotes Th1
T851 20-30 Gene_expression denotes associated
T852 20-30 Gene_expression denotes associated
T853 20-30 Gene_expression denotes associated
T854 20-30 Gene_expression denotes associated
T855 212-221 Localization denotes secretion
T856 212-221 Localization denotes secretion
T857 199-211 Regulation denotes dysregulated
T858 199-211 Regulation denotes dysregulated
R631 T841 T851 themeOf SHANK,associated
R633 T842 T852 themeOf RH,associated
R635 T843 T853 themeOf Rbckl1,associated
R637 T844 T854 themeOf Sipl1,associated
R638 T845 T855 themeOf T helper1,secretion
R639 T846 T856 themeOf Th1,secretion
R640 T855 T857 themeOf secretion,dysregulated
R641 T856 T858 themeOf secretion,dysregulated

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T73 5-12 Protein denotes Sharpin
T74 14-60 Protein denotes SHANK-associated RH domain-interacting protein
T75 77-83 Protein denotes Rbckl1
T76 85-90 Protein denotes Sipl1
R672 T74 T73 equivalentTo SHANK-associated RH domain-interacting protein,Sharpin
R674 T76 T73 equivalentTo Sipl1,Sharpin
R673 T75 T73 equivalentTo Rbckl1,Sharpin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T668 5-12 Q9H0F6 denotes Sharpin
T669 85-90 Q9H0F6 denotes Sipl1

test2

Id Subject Object Predicate Lexical cue
T39 5-12 Protein denotes Sharpin
T40 14-60 Protein denotes SHANK-associated RH domain-interacting protein
T41 77-83 Protein denotes Rbckl1
T42 85-90 Protein denotes Sipl1
R663 T40 T39 equivalentTo SHANK-associated RH domain-interacting protein,Sharpin
R664 T41 T39 equivalentTo Rbckl1,Sharpin
R666 T42 T39 equivalentTo Sipl1,Sharpin