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PMC:3279418 / 16041-16693 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14998 44-54 NN denotes Inhibition
T14999 55-57 IN denotes of
T15000 58-63 NN denotes NF-κB
T15001 64-73 NN denotes signaling
T15002 74-76 IN denotes in
T15003 77-81 NN denotes cpdm
T15004 82-86 NN denotes BMDC
T15005 88-90 NN denotes WT
T15006 91-94 CC denotes and
T15007 95-99 NN denotes cpdm
T15008 100-104 NN denotes BMDC
T15009 105-106 -LRB- denotes (
T15010 106-111 CD denotes 2×106
T15011 112-117 NN denotes cells
T15012 118-120 IN denotes in
T15013 121-124 CD denotes 0.5
T15014 125-127 NN denotes mL
T15015 128-136 JJ denotes complete
T15016 137-143 NN denotes medium
T15017 143-144 -RRB- denotes )
T15018 145-149 VB denotes were
T15019 150-160 VB denotes stimulated
T15020 161-165 IN denotes with
T15021 166-169 CD denotes 100
T15022 170-175 NN denotes ng/mL
T15023 176-179 NN denotes LPS
T15024 180-181 -LRB- denotes (
T15025 181-182 NN denotes A
T15026 182-183 -RRB- denotes )
T15027 184-186 CC denotes or
T15028 187-189 CD denotes 25
T15029 190-195 NN denotes µg/mL
T15030 196-200 NN denotes poly
T15031 201-202 NN denotes I
T15032 202-203 SYM denotes :
T15033 203-204 NN denotes C
T15034 205-206 -LRB- denotes (
T15035 206-207 NN denotes B
T15036 207-208 -RRB- denotes )
T15037 210-212 IN denotes At
T15038 213-214 CD denotes 0
T15039 214-215 -COMMA- denotes ,
T15040 216-218 CD denotes 15
T15041 218-219 -COMMA- denotes ,
T15042 220-222 CD denotes 30
T15043 222-223 -COMMA- denotes ,
T15044 224-227 CC denotes and
T15045 228-230 CD denotes 60
T15046 231-238 NN denotes minutes
T15047 238-239 -COMMA- denotes ,
T15048 240-250 JJ denotes whole-cell
T15049 251-258 NN denotes lysates
T15050 259-263 VB denotes were
T15051 264-272 VB denotes obtained
T15052 273-276 CC denotes and
T15053 277-284 JJ denotes subject
T15054 285-287 TO denotes to
T15055 288-299 NN denotes immunoblots
T15056 300-304 IN denotes with
T15057 305-315 NN denotes antibodies
T15058 316-323 IN denotes against
T15059 324-332 NN denotes proteins
T15060 333-341 VB denotes involved
T15061 342-344 IN denotes in
T15062 345-350 NN denotes NF-κB
T15063 350-351 -COMMA- denotes ,
T15064 352-361 NN denotes TBK1/IRF3
T15065 361-362 -COMMA- denotes ,
T15066 363-369 NN denotes ERK1/2
T15067 369-370 -COMMA- denotes ,
T15068 371-374 CC denotes and
T15069 375-378 NN denotes p38
T15070 379-388 NN denotes signaling
T15071 389-397 NN denotes pathways
T15072 399-409 NN denotes Beta-actin
T15073 410-413 VB denotes was
T15074 414-418 VB denotes used
T15075 419-421 IN denotes as
T15076 422-429 VB denotes loading
T15077 430-438 NN denotes control.
T15078 439-440 -LRB- denotes (
T15079 440-441 NN denotes C
T15080 441-442 -RRB- denotes )
T15081 443-451 JJ denotes Cellular
T15082 452-458 NN denotes levels
T15083 459-461 IN denotes of
T15084 462-470 NN denotes p-IKK1/2
T15085 471-474 CC denotes and
T15086 475-481 NN denotes p-IκBα
T15087 482-484 IN denotes in
T15088 485-489 NN denotes LPS-
T15089 490-492 CC denotes or
T15090 493-497 NN denotes poly
T15091 498-499 CD denotes I
T15092 499-500 -COLON- denotes :
T15093 500-512 JJ denotes C-stimulated
T15094 513-517 NN denotes BMDC
T15095 518-522 VB denotes were
T15096 523-534 VB denotes quantitated
T15097 535-539 IN denotes with
T15098 540-546 NN denotes ImageJ
T15099 547-548 -LRB- denotes (
T15100 548-551 NN denotes NIH
T15101 551-552 -RRB- denotes )
T15102 553-556 CC denotes and
T15103 557-566 VB denotes presented
T15104 567-569 IN denotes as
T15105 570-575 NN denotes trend
T15106 576-581 NN denotes lines
T15107 583-590 NN denotes Results
T15108 591-594 VB denotes are
T15109 595-609 JJ denotes representative
T15110 610-612 IN denotes of
T15111 613-615 IN denotes at
T15112 616-621 JJ denotes least
T15113 622-625 CD denotes two
T15114 626-637 JJ denotes independent
T15115 638-649 NN denotes experiments
R12537 T14998 T14999 arg1Of Inhibition,of
R12538 T14998 T15002 arg1Of Inhibition,in
R12539 T15001 T14999 arg2Of signaling,of
R12540 T15001 T15000 arg1Of signaling,NF-κB
R12541 T15004 T15002 arg2Of BMDC,in
R12542 T15004 T15003 arg1Of BMDC,cpdm
R12543 T15005 T15006 arg1Of WT,and
R12544 T15007 T15006 arg2Of cpdm,and
R12545 T15008 T15005 arg1Of BMDC,WT
R12546 T15008 T15007 arg1Of BMDC,cpdm
R12547 T15008 T15009 arg1Of BMDC,(
R12548 T15008 T15018 arg1Of BMDC,were
R12549 T15008 T15019 arg2Of BMDC,stimulated
R12550 T15011 T15009 arg2Of cells,(
R12551 T15011 T15010 arg1Of cells,2×106
R12552 T15011 T15012 arg1Of cells,in
R12553 T15016 T15012 arg2Of medium,in
R12554 T15016 T15013 arg1Of medium,0.5
R12555 T15016 T15014 arg1Of medium,mL
R12556 T15016 T15015 arg1Of medium,complete
R12557 T15017 T15009 arg3Of ),(
R12558 T15019 T15018 arg2Of stimulated,were
R12559 T15019 T15020 arg1Of stimulated,with
R12560 T15021 T15022 arg1Of 100,ng/mL
R12561 T15023 T15021 arg1Of LPS,100
R12562 T15023 T15024 arg1Of LPS,(
R12563 T15023 T15027 arg1Of LPS,or
R12564 T15025 T15024 arg2Of A,(
R12565 T15026 T15024 arg3Of ),(
R12566 T15027 T15020 arg2Of or,with
R12567 T15033 T15027 arg2Of C,or
R12568 T15033 T15028 arg1Of C,25
R12569 T15033 T15029 arg1Of C,µg/mL
R12570 T15033 T15030 arg1Of C,poly
R12571 T15033 T15031 arg1Of C,I
R12572 T15033 T15032 arg1Of C,:
R12573 T15033 T15034 arg1Of C,(
R12574 T15035 T15034 arg2Of B,(
R12575 T15036 T15034 arg3Of ),(
R12576 T15038 T15039 arg1Of 0,","
R12577 T15039 T15041 arg1Of ",",","
R12578 T15040 T15039 arg2Of 15,","
R12579 T15041 T15044 arg1Of ",",and
R12580 T15042 T15041 arg2Of 30,","
R12581 T15044 T15037 arg2Of and,At
R12582 T15044 T15043 arg1Of and,","
R12583 T15046 T15044 arg2Of minutes,and
R12584 T15046 T15045 arg1Of minutes,60
R12585 T15049 T15048 arg1Of lysates,whole-cell
R12586 T15049 T15050 arg1Of lysates,were
R12587 T15049 T15051 arg2Of lysates,obtained
R12588 T15049 T15053 arg1Of lysates,subject
R12589 T15051 T15052 arg1Of obtained,and
R12590 T15052 T15037 arg1Of and,At
R12591 T15052 T15047 arg1Of and,","
R12592 T15052 T15050 arg2Of and,were
R12593 T15053 T15052 arg2Of subject,and
R12594 T15053 T15054 arg1Of subject,to
R12595 T15055 T15054 arg2Of immunoblots,to
R12596 T15055 T15056 arg1Of immunoblots,with
R12597 T15057 T15056 arg2Of antibodies,with
R12598 T15057 T15058 arg1Of antibodies,against
R12599 T15059 T15058 arg2Of proteins,against
R12600 T15059 T15060 arg2Of proteins,involved
R12601 T15060 T15061 arg1Of involved,in
R12602 T15062 T15063 arg1Of NF-κB,","
R12603 T15063 T15065 arg1Of ",",","
R12604 T15064 T15063 arg2Of TBK1/IRF3,","
R12605 T15065 T15068 arg1Of ",",and
R12606 T15066 T15065 arg2Of ERK1/2,","
R12607 T15068 T15067 arg1Of and,","
R12608 T15069 T15068 arg2Of p38,and
R12609 T15071 T15061 arg2Of pathways,in
R12610 T15071 T15062 arg1Of pathways,NF-κB
R12611 T15071 T15064 arg1Of pathways,TBK1/IRF3
R12612 T15071 T15066 arg1Of pathways,ERK1/2
R12613 T15071 T15069 arg1Of pathways,p38
R12614 T15071 T15070 arg1Of pathways,signaling
R12615 T15072 T15073 arg1Of Beta-actin,was
R12616 T15072 T15074 arg2Of Beta-actin,used
R12617 T15074 T15073 arg2Of used,was
R12618 T15074 T15075 arg1Of used,as
R12619 T15074 T15092 arg1Of used,:
R12620 T15076 T15075 arg2Of loading,as
R12621 T15079 T15078 arg2Of C,(
R12622 T15080 T15078 arg3Of ),(
R12623 T15082 T15076 arg2Of levels,loading
R12624 T15082 T15077 arg1Of levels,control.
R12625 T15082 T15078 arg1Of levels,(
R12626 T15082 T15081 arg1Of levels,Cellular
R12627 T15082 T15083 arg1Of levels,of
R12628 T15082 T15087 arg1Of levels,in
R12629 T15084 T15085 arg1Of p-IKK1/2,and
R12630 T15085 T15083 arg2Of and,of
R12631 T15086 T15085 arg2Of p-IκBα,and
R12632 T15088 T15089 arg1Of LPS-,or
R12633 T15089 T15087 arg2Of or,in
R12634 T15090 T15089 arg2Of poly,or
R12635 T15090 T15091 arg1Of poly,I
R12636 T15094 T15093 arg1Of BMDC,C-stimulated
R12637 T15094 T15095 arg1Of BMDC,were
R12638 T15094 T15096 arg2Of BMDC,quantitated
R12639 T15094 T15103 arg2Of BMDC,presented
R12640 T15096 T15097 arg1Of quantitated,with
R12641 T15096 T15102 arg1Of quantitated,and
R12642 T15098 T15097 arg2Of ImageJ,with
R12643 T15098 T15099 arg1Of ImageJ,(
R12644 T15100 T15099 arg2Of NIH,(
R12645 T15101 T15099 arg3Of ),(
R12646 T15102 T15092 arg2Of and,:
R12647 T15102 T15095 arg2Of and,were
R12648 T15103 T15102 arg2Of presented,and
R12649 T15103 T15104 arg1Of presented,as
R12650 T15106 T15104 arg2Of lines,as
R12651 T15106 T15105 arg1Of lines,trend
R12652 T15107 T15108 arg1Of Results,are
R12653 T15107 T15109 arg1Of Results,representative
R12654 T15109 T15108 arg2Of representative,are
R12655 T15109 T15110 arg1Of representative,of
R12656 T15113 T15111 arg1Of two,at
R12657 T15113 T15112 arg1Of two,least
R12658 T15115 T15110 arg2Of experiments,of
R12659 T15115 T15113 arg1Of experiments,two
R12660 T15115 T15114 arg1Of experiments,independent

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15127 44-54 NNP denotes Inhibition
T15128 55-57 IN denotes of
T15129 58-63 NNP denotes NF-κB
T15130 64-73 VBG denotes signaling
T15131 74-76 IN denotes in
T15132 77-81 NN denotes cpdm
T15133 82-86 NNP denotes BMDC
T15134 86-87 . denotes .
T15135 88-90 NNP denotes WT
T15136 91-94 CC denotes and
T15137 95-99 VB denotes cpdm
T15138 100-104 NNP denotes BMDC
T15139 105-106 -LRB- denotes (
T15140 106-107 CD denotes 2
T15141 107-108 CD denotes ×
T15142 108-111 CD denotes 106
T15143 112-117 NNS denotes cells
T15144 118-120 IN denotes in
T15145 121-124 CD denotes 0.5
T15146 125-127 NNP denotes mL
T15147 128-136 JJ denotes complete
T15148 137-143 NN denotes medium
T15149 143-144 -RRB- denotes )
T15150 145-149 VBD denotes were
T15151 150-160 VBN denotes stimulated
T15152 161-165 IN denotes with
T15153 166-169 CD denotes 100
T15154 170-175 NNP denotes ng/mL
T15155 176-179 NNP denotes LPS
T15156 180-181 -LRB- denotes (
T15157 181-182 NNP denotes A
T15158 182-183 -RRB- denotes )
T15159 184-186 CC denotes or
T15160 187-189 CD denotes 25
T15161 190-192 NN denotes µg
T15162 192-193 CD denotes /
T15163 193-195 NNP denotes mL
T15164 196-200 NN denotes poly
T15165 201-202 PRP denotes I
T15166 202-203 : denotes :
T15167 203-204 NNP denotes C
T15168 205-206 -LRB- denotes (
T15169 206-207 NNP denotes B
T15170 207-208 -RRB- denotes )
T15171 208-209 . denotes .
T15172 210-212 IN denotes At
T15173 213-214 CD denotes 0
T15174 214-215 , denotes ,
T15175 216-218 CD denotes 15
T15176 218-219 , denotes ,
T15177 220-222 CD denotes 30
T15178 222-223 , denotes ,
T15179 224-227 CC denotes and
T15180 228-230 CD denotes 60
T15181 231-238 NNS denotes minutes
T15182 238-239 , denotes ,
T15183 240-250 JJ denotes whole-cell
T15184 251-258 NNS denotes lysates
T15185 259-263 VBD denotes were
T15186 264-272 VBN denotes obtained
T15187 273-276 CC denotes and
T15188 277-284 JJ denotes subject
T15189 285-287 TO denotes to
T15190 288-299 NNS denotes immunoblots
T15191 300-304 IN denotes with
T15192 305-315 NNS denotes antibodies
T15193 316-323 IN denotes against
T15194 324-332 NNS denotes proteins
T15195 333-341 VBN denotes involved
T15196 342-344 IN denotes in
T15197 345-350 NNP denotes NF-κB
T15198 350-351 , denotes ,
T15199 352-361 NNP denotes TBK1/IRF3
T15200 361-362 , denotes ,
T15201 363-369 NNP denotes ERK1/2
T15202 369-370 , denotes ,
T15203 371-374 CC denotes and
T15204 375-378 CD denotes p38
T15205 379-388 VBG denotes signaling
T15206 389-397 NNS denotes pathways
T15207 397-398 . denotes .
T15208 399-409 NN denotes Beta-actin
T15209 410-413 VBD denotes was
T15210 414-418 VBN denotes used
T15211 419-421 IN denotes as
T15212 422-429 VBG denotes loading
T15213 430-437 NN denotes control
T15214 437-438 . denotes .
T15215 439-440 -LRB- denotes (
T15216 440-441 NNP denotes C
T15217 441-442 -RRB- denotes )
T15218 443-451 NNP denotes Cellular
T15219 452-458 NNS denotes levels
T15220 459-461 IN denotes of
T15221 462-468 JJ denotes p-IKK1
T15222 468-469 NN denotes /
T15223 469-470 CD denotes 2
T15224 471-474 CC denotes and
T15225 475-481 NNP denotes p-IκBα
T15226 482-484 IN denotes in
T15227 485-488 NNP denotes LPS
T15228 488-489 : denotes -
T15229 490-492 CC denotes or
T15230 493-497 VB denotes poly
T15231 498-499 PRP denotes I
T15232 499-500 : denotes :
T15233 500-512 JJ denotes C-stimulated
T15234 513-517 NNP denotes BMDC
T15235 518-522 VBD denotes were
T15236 523-534 VBN denotes quantitated
T15237 535-539 IN denotes with
T15238 540-546 NNP denotes ImageJ
T15239 547-548 -LRB- denotes (
T15240 548-551 NNP denotes NIH
T15241 551-552 -RRB- denotes )
T15242 553-556 CC denotes and
T15243 557-566 VBN denotes presented
T15244 567-569 IN denotes as
T15245 570-575 NN denotes trend
T15246 576-581 NNS denotes lines
T15247 581-582 . denotes .
T15248 583-590 NNS denotes Results
T15249 591-594 VBP denotes are
T15250 595-609 NN denotes representative
T15251 610-612 IN denotes of
T15252 613-615 IN denotes at
T15253 616-621 JJS denotes least
T15254 622-625 CD denotes two
T15255 626-637 JJ denotes independent
T15256 638-649 NNS denotes experiments
T15257 649-650 . denotes .
R12661 T15127 T15130 nsubj Inhibition,signaling
R12662 T15128 T15127 prep of,Inhibition
R12663 T15129 T15128 pobj NF-κB,of
R12664 T15130 T15130 ROOT signaling,signaling
R12665 T15131 T15130 prep in,signaling
R12666 T15132 T15133 compound cpdm,BMDC
R12667 T15133 T15131 pobj BMDC,in
R12668 T15134 T15130 punct .,signaling
R12669 T15135 T15143 nmod WT,cells
R12670 T15136 T15135 cc and,WT
R12671 T15137 T15138 compound cpdm,BMDC
R12672 T15138 T15135 conj BMDC,WT
R12673 T15139 T15140 punct (,2
R12674 T15140 T15143 nummod 2,cells
R12675 T15141 T15143 nummod ×,cells
R12676 T15142 T15143 nummod 106,cells
R12677 T15143 T15151 nsubjpass cells,stimulated
R12678 T15144 T15143 prep in,cells
R12679 T15145 T15148 nummod 0.5,medium
R12680 T15146 T15148 nmod mL,medium
R12681 T15147 T15148 amod complete,medium
R12682 T15148 T15144 pobj medium,in
R12683 T15149 T15143 punct ),cells
R12684 T15150 T15151 auxpass were,stimulated
R12685 T15151 T15151 ROOT stimulated,stimulated
R12686 T15152 T15151 prep with,stimulated
R12687 T15153 T15155 nummod 100,LPS
R12688 T15154 T15155 compound ng/mL,LPS
R12689 T15155 T15152 pobj LPS,with
R12690 T15156 T15157 punct (,A
R12691 T15157 T15155 appos A,LPS
R12692 T15158 T15157 punct ),A
R12693 T15159 T15155 cc or,LPS
R12694 T15160 T15162 quantmod 25,/
R12695 T15161 T15162 quantmod µg,/
R12696 T15162 T15155 conj /,LPS
R12697 T15163 T15164 compound mL,poly
R12698 T15164 T15165 dep poly,I
R12699 T15165 T15162 meta I,/
R12700 T15166 T15167 punct :,C
R12701 T15167 T15170 nmod C,)
R12702 T15168 T15169 punct (,B
R12703 T15169 T15167 appos B,C
R12704 T15170 T15165 punct ),I
R12705 T15171 T15151 punct .,stimulated
R12706 T15172 T15186 prep At,obtained
R12707 T15173 T15172 pobj 0,At
R12708 T15174 T15177 punct ",",30
R12709 T15175 T15177 quantmod 15,30
R12710 T15176 T15177 punct ",",30
R12711 T15177 T15173 appos 30,0
R12712 T15178 T15177 punct ",",30
R12713 T15179 T15177 cc and,30
R12714 T15180 T15181 nummod 60,minutes
R12715 T15181 T15186 npadvmod minutes,obtained
R12716 T15182 T15186 punct ",",obtained
R12717 T15183 T15184 amod whole-cell,lysates
R12718 T15184 T15186 nsubjpass lysates,obtained
R12719 T15185 T15186 auxpass were,obtained
R12720 T15186 T15186 ROOT obtained,obtained
R12721 T15187 T15186 cc and,obtained
R12722 T15188 T15186 conj subject,obtained
R12723 T15189 T15188 prep to,subject
R12724 T15190 T15189 pobj immunoblots,to
R12725 T15191 T15190 prep with,immunoblots
R12726 T15192 T15191 pobj antibodies,with
R12727 T15193 T15190 prep against,immunoblots
R12728 T15194 T15193 pobj proteins,against
R12729 T15195 T15194 acl involved,proteins
R12730 T15196 T15195 prep in,involved
R12731 T15197 T15196 pobj NF-κB,in
R12732 T15198 T15197 punct ",",NF-κB
R12733 T15199 T15197 conj TBK1/IRF3,NF-κB
R12734 T15200 T15199 punct ",",TBK1/IRF3
R12735 T15201 T15199 conj ERK1/2,TBK1/IRF3
R12736 T15202 T15201 punct ",",ERK1/2
R12737 T15203 T15201 cc and,ERK1/2
R12738 T15204 T15206 nummod p38,pathways
R12739 T15205 T15206 compound signaling,pathways
R12740 T15206 T15197 appos pathways,NF-κB
R12741 T15207 T15186 punct .,obtained
R12742 T15208 T15210 nsubjpass Beta-actin,used
R12743 T15209 T15210 auxpass was,used
R12744 T15210 T15210 ROOT used,used
R12745 T15211 T15210 prep as,used
R12746 T15212 T15211 pcomp loading,as
R12747 T15213 T15212 dobj control,loading
R12748 T15214 T15210 punct .,used
R12749 T15215 T15225 punct (,p-IκBα
R12750 T15216 T15219 nmod C,levels
R12751 T15217 T15216 punct ),C
R12752 T15218 T15219 amod Cellular,levels
R12753 T15219 T15225 nsubj levels,p-IκBα
R12754 T15220 T15219 prep of,levels
R12755 T15221 T15222 compound p-IKK1,/
R12756 T15222 T15220 pobj /,of
R12757 T15223 T15222 nummod 2,/
R12758 T15224 T15222 cc and,/
R12759 T15225 T15225 ROOT p-IκBα,p-IκBα
R12760 T15226 T15225 prep in,p-IκBα
R12761 T15227 T15226 pobj LPS,in
R12762 T15228 T15225 punct -,p-IκBα
R12763 T15229 T15225 cc or,p-IκBα
R12764 T15230 T15236 intj poly,quantitated
R12765 T15231 T15236 nsubjpass I,quantitated
R12766 T15232 T15236 punct :,quantitated
R12767 T15233 T15234 compound C-stimulated,BMDC
R12768 T15234 T15236 nsubjpass BMDC,quantitated
R12769 T15235 T15236 auxpass were,quantitated
R12770 T15236 T15236 ROOT quantitated,quantitated
R12771 T15237 T15236 prep with,quantitated
R12772 T15238 T15237 pobj ImageJ,with
R12773 T15239 T15238 punct (,ImageJ
R12774 T15240 T15238 appos NIH,ImageJ
R12775 T15241 T15238 punct ),ImageJ
R12776 T15242 T15236 cc and,quantitated
R12777 T15243 T15236 conj presented,quantitated
R12778 T15244 T15243 prep as,presented
R12779 T15245 T15246 compound trend,lines
R12780 T15246 T15244 pobj lines,as
R12781 T15247 T15236 punct .,quantitated
R12782 T15248 T15249 nsubj Results,are
R12783 T15249 T15249 ROOT are,are
R12784 T15250 T15249 attr representative,are
R12785 T15251 T15250 prep of,representative
R12786 T15252 T15253 advmod at,least
R12787 T15253 T15254 advmod least,two
R12788 T15254 T15256 nummod two,experiments
R12789 T15255 T15256 amod independent,experiments
R12790 T15256 T15251 pobj experiments,of
R12791 T15257 T15249 punct .,are

GO-BP

Id Subject Object Predicate Lexical cue
T15263 64-73 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T15264 379-388 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T15265 352-356 http://purl.obolibrary.org/obo/GO_0008384 denotes TBK1
T15266 363-367 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T15267 375-378 http://purl.obolibrary.org/obo/GO_0004707 denotes p38
T15268 379-397 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T15269 379-403 http://purl.obolibrary.org/obo/GO_0035791 denotes signaling pathways. Beta
T15270 443-451 http://purl.obolibrary.org/obo/GO_0007349 denotes Cellular

GO-MF

Id Subject Object Predicate Lexical cue
T15271 305-315 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T15272 352-356 http://purl.obolibrary.org/obo/GO_0008384 denotes TBK1
T15273 363-367 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T15274 375-378 http://purl.obolibrary.org/obo/GO_0004707 denotes p38

GO-CC

Id Subject Object Predicate Lexical cue
T15275 112-117 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T15276 246-250 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T15277 305-315 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T15278 305-315 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies

sentences

Id Subject Object Predicate Lexical cue
T14993 44-87 Sentence denotes Inhibition of NF-κB signaling in cpdm BMDC.
T14994 88-209 Sentence denotes WT and cpdm BMDC (2×106 cells in 0.5 mL complete medium) were stimulated with 100 ng/mL LPS (A) or 25 µg/mL poly I:C (B).
T14995 210-398 Sentence denotes At 0, 15, 30, and 60 minutes, whole-cell lysates were obtained and subject to immunoblots with antibodies against proteins involved in NF-κB, TBK1/IRF3, ERK1/2, and p38 signaling pathways.
T14996 399-582 Sentence denotes Beta-actin was used as loading control. (C) Cellular levels of p-IKK1/2 and p-IκBα in LPS- or poly I:C-stimulated BMDC were quantitated with ImageJ (NIH) and presented as trend lines.
T14997 583-650 Sentence denotes Results are representative of at least two independent experiments.
T108 0-87 Sentence denotes 10.1371/journal.pone.0031809.g006 Figure 6 Inhibition of NF-κB signaling in cpdm BMDC.
T109 88-209 Sentence denotes WT and cpdm BMDC (2×106 cells in 0.5 mL complete medium) were stimulated with 100 ng/mL LPS (A) or 25 µg/mL poly I:C (B).
T110 210-398 Sentence denotes At 0, 15, 30, and 60 minutes, whole-cell lysates were obtained and subject to immunoblots with antibodies against proteins involved in NF-κB, TBK1/IRF3, ERK1/2, and p38 signaling pathways.
T111 399-582 Sentence denotes Beta-actin was used as loading control. (C) Cellular levels of p-IKK1/2 and p-IκBα in LPS- or poly I:C-stimulated BMDC were quantitated with ImageJ (NIH) and presented as trend lines.
T112 583-650 Sentence denotes Results are representative of at least two independent experiments.

events-check-again

Id Subject Object Predicate Lexical cue
T15295 352-356 Protein denotes TBK1
T15296 357-361 Protein denotes IRF3
T15297 363-367 Protein denotes ERK1
T15298 368-369 Protein denotes 2
T15299 399-409 Protein denotes Beta-actin
T15300 464-468 Protein denotes IKK1
T15301 469-470 Protein denotes 2
T15302 477-481 Protein denotes IκBα

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T15303 58-63 Protein denotes NF-κB
T15304 44-54 Negative_regulation denotes Inhibition
T15305 345-350 Protein denotes NF-κB
T15306 352-356 Protein denotes TBK1
T15307 357-361 Protein denotes IRF3
T15308 363-367 Protein denotes ERK1
T15309 375-378 Protein denotes p38
T15310 399-403 Protein denotes Beta
T15311 404-409 Protein denotes actin
T15312 475-481 Protein denotes p-IκBα
T15313 540-546 Protein denotes ImageJ
T15314 548-551 Protein denotes NIH
T15315 452-458 Gene_expression denotes levels
R12792 T15303 T15304 themeOf NF-κB,Inhibition
R12793 T15312 T15315 themeOf p-IκBα,levels

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T14990 464-468 Protein denotes IKK1
T14991 469-470 Protein denotes 2
T14992 477-481 Protein denotes IκBα
T14985 352-356 Protein denotes TBK1
T14986 357-361 Protein denotes IRF3
T14987 363-367 Protein denotes ERK1
T14988 368-369 Protein denotes 2
T14989 399-409 Protein denotes Beta-actin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15116 352-356 Q9UHD2 denotes TBK1
T15117 357-361 Q14653 denotes IRF3
T15118 363-367 P27361 denotes ERK1
T15119 375-378 O15264 denotes p38
T15120 375-378 P53778 denotes p38
T15121 375-378 Q16539 denotes p38
T15122 375-378 Q15759 denotes p38
T15123 399-409 P60709 denotes Beta-actin
T15124 464-468 O15111 denotes IKK1
T15125 464-468 Q60680-2 denotes IKK1
T15126 477-481 P25963 denotes IκBα

test2

Id Subject Object Predicate Lexical cue
T14977 352-356 Protein denotes TBK1
T14978 357-361 Protein denotes IRF3
T14979 363-367 Protein denotes ERK1
T14980 368-369 Protein denotes 2
T14981 399-409 Protein denotes Beta-actin
T14982 464-468 Protein denotes IKK1
T14983 469-470 Protein denotes 2
T14984 477-481 Protein denotes IκBα