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PMC:3279418 / 15887-16040 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5296 0-5 DT denotes These
T5297 6-13 NN denotes results
T5298 14-22 VB denotes indicate
T5299 23-27 IN denotes that
T5300 28-31 DT denotes the
T5301 32-39 NN denotes absence
T5302 40-42 IN denotes of
T5303 43-53 JJ denotes functional
T5304 54-61 NN denotes SHARPIN
T5305 62-71 VB denotes decreased
T5306 72-77 NN denotes NF-κB
T5307 78-88 NN denotes activation
T5308 89-92 CC denotes but
T5309 93-96 VB denotes did
T5310 97-100 RB denotes not
T5311 101-107 VB denotes affect
T5312 108-117 NN denotes TBK1/IRF3
T5313 117-118 -COMMA- denotes ,
T5314 119-125 NN denotes ERK1/2
T5315 125-126 -COMMA- denotes ,
T5316 127-130 CC denotes and
T5317 131-134 NN denotes p38
T5318 135-144 NN denotes signaling
T5319 145-147 IN denotes in
T5320 148-152 NN denotes BMDC
R4429 T5297 T5296 arg1Of results,These
R4430 T5297 T5298 arg1Of results,indicate
R4431 T5301 T5300 arg1Of absence,the
R4432 T5301 T5302 arg1Of absence,of
R4433 T5301 T5305 arg1Of absence,decreased
R4434 T5301 T5309 arg1Of absence,did
R4435 T5301 T5311 arg1Of absence,affect
R4436 T5304 T5302 arg2Of SHARPIN,of
R4437 T5304 T5303 arg1Of SHARPIN,functional
R4438 T5305 T5308 arg1Of decreased,but
R4439 T5307 T5305 arg2Of activation,decreased
R4440 T5307 T5306 arg1Of activation,NF-κB
R4441 T5308 T5298 arg2Of but,indicate
R4442 T5308 T5299 arg1Of but,that
R4443 T5311 T5308 arg2Of affect,but
R4444 T5311 T5309 arg2Of affect,did
R4445 T5311 T5310 arg1Of affect,not
R4446 T5312 T5313 arg1Of TBK1/IRF3,","
R4447 T5313 T5316 arg1Of ",",and
R4448 T5314 T5313 arg2Of ERK1/2,","
R4449 T5316 T5311 arg2Of and,affect
R4450 T5316 T5315 arg1Of and,","
R4451 T5316 T5319 arg1Of and,in
R4452 T5318 T5316 arg2Of signaling,and
R4453 T5318 T5317 arg1Of signaling,p38
R4454 T5320 T5319 arg2Of BMDC,in

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4886 0-5 DT denotes These
T4887 6-13 NNS denotes results
T4888 14-22 VBP denotes indicate
T4889 23-27 IN denotes that
T4890 28-31 DT denotes the
T4891 32-39 NN denotes absence
T4892 40-42 IN denotes of
T4893 43-53 JJ denotes functional
T4894 54-61 NNP denotes SHARPIN
T4895 62-71 VBD denotes decreased
T4896 72-77 NNP denotes NF-κB
T4897 78-88 NN denotes activation
T4898 89-92 CC denotes but
T4899 93-96 VBD denotes did
T4900 97-100 RB denotes not
T4901 101-107 VB denotes affect
T4902 108-117 CD denotes TBK1/IRF3
T4903 117-118 , denotes ,
T4904 119-125 NNP denotes ERK1/2
T4905 125-126 , denotes ,
T4906 127-130 CC denotes and
T4907 131-134 CD denotes p38
T4908 135-144 VBG denotes signaling
T4909 145-147 IN denotes in
T4910 148-152 NNP denotes BMDC
T4911 152-153 . denotes .
R4021 T4886 T4887 det These,results
R4022 T4887 T4888 nsubj results,indicate
R4023 T4888 T4888 ROOT indicate,indicate
R4024 T4889 T4895 mark that,decreased
R4025 T4890 T4891 det the,absence
R4026 T4891 T4895 nsubj absence,decreased
R4027 T4892 T4891 prep of,absence
R4028 T4893 T4894 amod functional,SHARPIN
R4029 T4894 T4892 pobj SHARPIN,of
R4030 T4895 T4888 ccomp decreased,indicate
R4031 T4896 T4897 compound NF-κB,activation
R4032 T4897 T4895 dobj activation,decreased
R4033 T4898 T4895 cc but,decreased
R4034 T4899 T4901 aux did,affect
R4035 T4900 T4901 neg not,affect
R4036 T4901 T4895 conj affect,decreased
R4037 T4902 T4901 dobj TBK1/IRF3,affect
R4038 T4903 T4902 punct ",",TBK1/IRF3
R4039 T4904 T4902 conj ERK1/2,TBK1/IRF3
R4040 T4905 T4904 punct ",",ERK1/2
R4041 T4906 T4904 cc and,ERK1/2
R4042 T4907 T4908 nummod p38,signaling
R4043 T4908 T4904 conj signaling,ERK1/2
R4044 T4909 T4908 prep in,signaling
R4045 T4910 T4909 pobj BMDC,in
R4046 T4911 T4888 punct .,indicate

GO-BP

Id Subject Object Predicate Lexical cue
T5385 135-144 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T5403 108-112 http://purl.obolibrary.org/obo/GO_0008384 denotes TBK1
T5409 131-134 http://purl.obolibrary.org/obo/GO_0004707 denotes p38
T5419 72-88 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation

GO-MF

Id Subject Object Predicate Lexical cue
T5423 108-112 http://purl.obolibrary.org/obo/GO_0008384 denotes TBK1
T5429 131-134 http://purl.obolibrary.org/obo/GO_0004707 denotes p38

sentences

Id Subject Object Predicate Lexical cue
T4488 0-153 Sentence denotes These results indicate that the absence of functional SHARPIN decreased NF-κB activation but did not affect TBK1/IRF3, ERK1/2, and p38 signaling in BMDC.
T107 0-153 Sentence denotes These results indicate that the absence of functional SHARPIN decreased NF-κB activation but did not affect TBK1/IRF3, ERK1/2, and p38 signaling in BMDC.

events-check-again

Id Subject Object Predicate Lexical cue
T5627 32-39 Negative_regulation denotes absence
T5628 54-61 Protein denotes SHARPIN
T5629 108-112 Protein denotes TBK1
T5630 113-117 Protein denotes IRF3
T5631 119-123 Protein denotes ERK1
T5632 124-125 Protein denotes 2
R4541 T5628 T5627 themeOf SHARPIN,absence

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5721 54-74 Protein denotes SHARPIN decreased NF
T5722 75-77 Protein denotes κB
T5723 108-112 Protein denotes TBK1
T5724 113-117 Protein denotes IRF3
T5725 119-123 Protein denotes ERK1
T5726 131-134 Protein denotes p38
T5727 32-39 Negative_regulation denotes absence
T5728 78-88 Positive_regulation denotes activation
T5729 101-107 Regulation denotes affect
T5730 101-107 Regulation denotes affect
T5731 101-107 Regulation denotes affect
R4595 T5721 T5727 themeOf SHARPIN decreased NF,absence
R4596 T5722 T5728 themeOf κB,activation
R4597 T5723 T5729 themeOf TBK1,affect
R4598 T5724 T5730 themeOf IRF3,affect
R4599 T5725 T5731 themeOf ERK1,affect
R4600 T5727 T5729 causeOf absence,affect
R4601 T5727 T5730 causeOf absence,affect
R4602 T5727 T5731 causeOf absence,affect

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T4469 32-39 Negative_regulation denotes absence
T4470 54-61 Protein denotes SHARPIN
T4471 108-112 Protein denotes TBK1
T4472 113-117 Protein denotes IRF3
T4473 119-123 Protein denotes ERK1
T4474 124-125 Protein denotes 2
R3623 T4470 T4469 themeOf SHARPIN,absence

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5355 108-112 Q9UHD2 denotes TBK1
T5356 113-117 Q14653 denotes IRF3
T5357 119-123 P27361 denotes ERK1
T5358 131-134 O15264 denotes p38
T5359 131-134 Q15759 denotes p38
T5360 131-134 Q16539 denotes p38
T5361 131-134 P53778 denotes p38
T5354 54-61 Q9H0F6 denotes SHARPIN

test2

Id Subject Object Predicate Lexical cue
T4403 32-39 Negative_regulation denotes absence
T4404 54-61 Protein denotes SHARPIN
T4405 101-107 Regulation denotes affect
T4406 108-112 Protein denotes TBK1
T4407 113-117 Protein denotes IRF3
T4408 119-123 Protein denotes ERK1
T4409 124-125 Protein denotes 2
R3593 T4403 T4405 causeOf absence,affect
R3594 T4404 T4403 themeOf SHARPIN,absence