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PMC:3279418 / 15776-15886 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5273 0-3 DT denotes The
T5274 4-8 NN denotes cpdm
T5275 9-13 NN denotes BMDC
T5276 14-23 VB denotes exhibited
T5277 24-31 JJ denotes similar
T5278 32-38 NN denotes levels
T5279 39-41 IN denotes of
T5280 42-46 NN denotes TBK1
T5281 46-47 -COMMA- denotes ,
T5282 48-54 NN denotes ERK1/2
T5283 54-55 -COMMA- denotes ,
T5284 56-59 CC denotes and
T5285 60-63 NN denotes p38
T5286 64-79 NN denotes phosphorylation
T5287 80-82 TO denotes to
T5288 83-88 DT denotes those
T5289 89-91 IN denotes of
T5290 92-94 JJ denotes WT
T5291 95-100 NN denotes cells
T5292 101-102 -LRB- denotes (
T5293 102-106 NN denotes Fig.
T5294 107-108 CD denotes 6
T5295 108-109 -RRB- denotes )
R4407 T5275 T5273 arg1Of BMDC,The
R4408 T5275 T5274 arg1Of BMDC,cpdm
R4409 T5275 T5276 arg1Of BMDC,exhibited
R4410 T5276 T5287 arg1Of exhibited,to
R4411 T5278 T5276 arg2Of levels,exhibited
R4412 T5278 T5277 arg1Of levels,similar
R4413 T5278 T5279 arg1Of levels,of
R4414 T5280 T5281 arg1Of TBK1,","
R4415 T5281 T5284 arg1Of ",",and
R4416 T5282 T5281 arg2Of ERK1/2,","
R4417 T5284 T5279 arg2Of and,of
R4418 T5284 T5283 arg1Of and,","
R4419 T5286 T5284 arg2Of phosphorylation,and
R4420 T5286 T5285 arg1Of phosphorylation,p38
R4421 T5288 T5287 arg2Of those,to
R4422 T5288 T5289 arg1Of those,of
R4423 T5291 T5289 arg2Of cells,of
R4424 T5291 T5290 arg1Of cells,WT
R4425 T5291 T5292 arg1Of cells,(
R4426 T5293 T5292 arg2Of Fig.,(
R4427 T5293 T5294 arg1Of Fig.,6
R4428 T5295 T5292 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4862 0-3 DT denotes The
T4863 4-8 NN denotes cpdm
T4864 9-13 NNP denotes BMDC
T4865 14-23 VBD denotes exhibited
T4866 24-31 JJ denotes similar
T4867 32-38 NNS denotes levels
T4868 39-41 IN denotes of
T4869 42-46 CD denotes TBK1
T4870 46-47 , denotes ,
T4871 48-54 NNP denotes ERK1/2
T4872 54-55 , denotes ,
T4873 56-59 CC denotes and
T4874 60-63 CD denotes p38
T4875 64-79 NN denotes phosphorylation
T4876 80-82 TO denotes to
T4877 83-88 DT denotes those
T4878 89-91 IN denotes of
T4879 92-94 NNP denotes WT
T4880 95-100 NNS denotes cells
T4881 101-102 -LRB- denotes (
T4882 102-106 NN denotes Fig.
T4883 107-108 CD denotes 6
T4884 108-109 -RRB- denotes )
T4885 109-110 . denotes .
R3997 T4862 T4864 det The,BMDC
R3998 T4863 T4864 compound cpdm,BMDC
R3999 T4864 T4865 nsubj BMDC,exhibited
R4000 T4865 T4865 ROOT exhibited,exhibited
R4001 T4866 T4867 amod similar,levels
R4002 T4867 T4865 dobj levels,exhibited
R4003 T4868 T4867 prep of,levels
R4004 T4869 T4868 pobj TBK1,of
R4005 T4870 T4865 punct ",",exhibited
R4006 T4871 T4865 npadvmod ERK1/2,exhibited
R4007 T4872 T4871 punct ",",ERK1/2
R4008 T4873 T4871 cc and,ERK1/2
R4009 T4874 T4875 nummod p38,phosphorylation
R4010 T4875 T4865 npadvmod phosphorylation,exhibited
R4011 T4876 T4875 prep to,phosphorylation
R4012 T4877 T4876 pobj those,to
R4013 T4878 T4877 prep of,those
R4014 T4879 T4880 compound WT,cells
R4015 T4880 T4878 pobj cells,of
R4016 T4881 T4882 punct (,Fig.
R4017 T4882 T4877 appos Fig.,those
R4018 T4883 T4882 nummod 6,Fig.
R4019 T4884 T4882 punct ),Fig.
R4020 T4885 T4865 punct .,exhibited

GO-BP

Id Subject Object Predicate Lexical cue
T5402 42-46 http://purl.obolibrary.org/obo/GO_0008384 denotes TBK1
T5406 48-52 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T5407 53-63 http://purl.obolibrary.org/obo/GO_0004707 denotes 2, and p38
T5408 60-63 http://purl.obolibrary.org/obo/GO_0004707 denotes p38
T5413 64-79 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-MF

Id Subject Object Predicate Lexical cue
T5422 42-46 http://purl.obolibrary.org/obo/GO_0008384 denotes TBK1
T5426 48-52 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T5427 53-63 http://purl.obolibrary.org/obo/GO_0004707 denotes 2, and p38
T5428 60-63 http://purl.obolibrary.org/obo/GO_0004707 denotes p38

GO-CC

Id Subject Object Predicate Lexical cue
T5437 95-100 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T4487 0-110 Sentence denotes The cpdm BMDC exhibited similar levels of TBK1, ERK1/2, and p38 phosphorylation to those of WT cells (Fig. 6).
T106 0-110 Sentence denotes The cpdm BMDC exhibited similar levels of TBK1, ERK1/2, and p38 phosphorylation to those of WT cells (Fig. 6).

events-check-again

Id Subject Object Predicate Lexical cue
T5621 42-46 Protein denotes TBK1
T5622 48-52 Protein denotes ERK1
T5623 53-54 Protein denotes 2
T5624 64-79 Phosphorylation denotes phosphorylation
T5625 64-79 Phosphorylation denotes phosphorylation
T5626 64-79 Phosphorylation denotes phosphorylation
R4538 T5621 T5626 themeOf TBK1,phosphorylation
R4539 T5622 T5624 themeOf ERK1,phosphorylation
R4540 T5623 T5625 themeOf 2,phosphorylation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5708 42-46 Protein denotes TBK1
T5709 48-54 Protein denotes ERK1/2
T5710 60-63 Protein denotes p38
T5711 32-38 Positive_regulation denotes levels
T5712 32-38 Positive_regulation denotes levels
T5713 64-79 Phosphorylation denotes phosphorylation
T5714 64-79 Phosphorylation denotes phosphorylation
T5715 64-79 Phosphorylation denotes phosphorylation
T5716 14-23 Negative_regulation denotes exhibited
T5717 14-23 Negative_regulation denotes exhibited
T5718 32-38 Positive_regulation denotes levels
T5719 32-38 Positive_regulation denotes levels
T5720 32-38 Positive_regulation denotes levels
R4585 T5708 T5711 themeOf TBK1,levels
R4586 T5708 T5713 themeOf TBK1,phosphorylation
R4587 T5709 T5712 themeOf ERK1/2,levels
R4588 T5709 T5714 themeOf ERK1/2,phosphorylation
R4589 T5710 T5715 themeOf p38,phosphorylation
R4590 T5711 T5716 themeOf levels,exhibited
R4591 T5712 T5717 themeOf levels,exhibited
R4592 T5713 T5718 themeOf phosphorylation,levels
R4593 T5714 T5719 themeOf phosphorylation,levels
R4594 T5715 T5720 themeOf phosphorylation,levels

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T4463 42-46 Protein denotes TBK1
T4464 48-52 Protein denotes ERK1
T4465 53-54 Protein denotes 2
T4466 64-79 Phosphorylation denotes phosphorylation
T4467 64-79 Phosphorylation denotes phosphorylation
T4468 64-79 Phosphorylation denotes phosphorylation
R3620 T4463 T4468 themeOf TBK1,phosphorylation
R3621 T4464 T4466 themeOf ERK1,phosphorylation
R3622 T4465 T4467 themeOf 2,phosphorylation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5348 42-46 Q9UHD2 denotes TBK1
T5349 48-52 P27361 denotes ERK1
T5350 60-63 O15264 denotes p38
T5351 60-63 P53778 denotes p38
T5352 60-63 Q16539 denotes p38
T5353 60-63 Q15759 denotes p38

test2

Id Subject Object Predicate Lexical cue
T4399 42-46 Protein denotes TBK1
T4400 48-52 Protein denotes ERK1
T4401 53-54 Protein denotes 2
T4402 64-79 Phosphorylation denotes phosphorylation
R3590 T4399 T4402 themeOf TBK1,phosphorylation
R3591 T4400 T4402 themeOf ERK1,phosphorylation
R3592 T4401 T4402 themeOf 2,phosphorylation