PMC:3279418 / 15185-15342 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3279418","sourcedb":"PMC","sourceid":"3279418","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3279418","text":"We next determined if disrupted NF-κB, TBK1/IRF3, and/or MAPK signaling may underlie the impaired cytokine production from stimulated Sharpin-deficient BMDC.","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T5178","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T5179","span":{"begin":3,"end":7},"obj":"RB"},{"id":"T5180","span":{"begin":8,"end":18},"obj":"VB"},{"id":"T5181","span":{"begin":19,"end":21},"obj":"IN"},{"id":"T5182","span":{"begin":22,"end":31},"obj":"VB"},{"id":"T5183","span":{"begin":32,"end":37},"obj":"NN"},{"id":"T5184","span":{"begin":37,"end":38},"obj":"-COMMA-"},{"id":"T5185","span":{"begin":39,"end":48},"obj":"NN"},{"id":"T5186","span":{"begin":48,"end":49},"obj":"-COMMA-"},{"id":"T5187","span":{"begin":50,"end":56},"obj":"CC"},{"id":"T5188","span":{"begin":57,"end":61},"obj":"NN"},{"id":"T5189","span":{"begin":62,"end":71},"obj":"NN"},{"id":"T5190","span":{"begin":72,"end":75},"obj":"MD"},{"id":"T5191","span":{"begin":76,"end":84},"obj":"VB"},{"id":"T5192","span":{"begin":85,"end":88},"obj":"DT"},{"id":"T5193","span":{"begin":89,"end":97},"obj":"JJ"},{"id":"T5194","span":{"begin":98,"end":106},"obj":"NN"},{"id":"T5195","span":{"begin":107,"end":117},"obj":"NN"},{"id":"T5196","span":{"begin":118,"end":122},"obj":"IN"},{"id":"T5197","span":{"begin":123,"end":133},"obj":"VB"},{"id":"T5198","span":{"begin":134,"end":151},"obj":"JJ"},{"id":"T5199","span":{"begin":152,"end":156},"obj":"NN"}],"relations":[{"id":"R4312","pred":"arg1Of","subj":"T5178","obj":"T5180"},{"id":"R4313","pred":"arg1Of","subj":"T5180","obj":"T5179"},{"id":"R4314","pred":"arg1Of","subj":"T5180","obj":"T5181"},{"id":"R4315","pred":"arg2Of","subj":"T5183","obj":"T5182"},{"id":"R4316","pred":"arg1Of","subj":"T5183","obj":"T5184"},{"id":"R4317","pred":"arg1Of","subj":"T5184","obj":"T5187"},{"id":"R4318","pred":"arg2Of","subj":"T5185","obj":"T5184"},{"id":"R4319","pred":"arg1Of","subj":"T5187","obj":"T5186"},{"id":"R4320","pred":"arg1Of","subj":"T5187","obj":"T5190"},{"id":"R4321","pred":"arg1Of","subj":"T5187","obj":"T5191"},{"id":"R4322","pred":"arg2Of","subj":"T5189","obj":"T5187"},{"id":"R4323","pred":"arg1Of","subj":"T5189","obj":"T5188"},{"id":"R4324","pred":"arg2Of","subj":"T5191","obj":"T5181"},{"id":"R4325","pred":"arg2Of","subj":"T5191","obj":"T5190"},{"id":"R4326","pred":"arg2Of","subj":"T5195","obj":"T5191"},{"id":"R4327","pred":"arg1Of","subj":"T5195","obj":"T5192"},{"id":"R4328","pred":"arg1Of","subj":"T5195","obj":"T5193"},{"id":"R4329","pred":"arg1Of","subj":"T5195","obj":"T5194"},{"id":"R4330","pred":"arg1Of","subj":"T5195","obj":"T5196"},{"id":"R4331","pred":"arg2Of","subj":"T5199","obj":"T5196"},{"id":"R4332","pred":"arg2Of","subj":"T5199","obj":"T5197"},{"id":"R4333","pred":"arg1Of","subj":"T5199","obj":"T5198"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T5178","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5179","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5180","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5181","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5182","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5183","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5184","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5185","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5186","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5187","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5188","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5189","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5190","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5191","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5192","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5193","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5194","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5195","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5196","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5197","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5198","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5199","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T4762","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T4763","span":{"begin":3,"end":7},"obj":"JJ"},{"id":"T4764","span":{"begin":8,"end":18},"obj":"VBN"},{"id":"T4765","span":{"begin":19,"end":21},"obj":"IN"},{"id":"T4766","span":{"begin":22,"end":31},"obj":"VBN"},{"id":"T4767","span":{"begin":32,"end":37},"obj":"NNP"},{"id":"T4768","span":{"begin":37,"end":38},"obj":","},{"id":"T4769","span":{"begin":39,"end":48},"obj":"CD"},{"id":"T4770","span":{"begin":48,"end":49},"obj":","},{"id":"T4771","span":{"begin":50,"end":56},"obj":"CC"},{"id":"T4772","span":{"begin":57,"end":61},"obj":"NNP"},{"id":"T4773","span":{"begin":62,"end":71},"obj":"VBG"},{"id":"T4774","span":{"begin":72,"end":75},"obj":"MD"},{"id":"T4775","span":{"begin":76,"end":84},"obj":"VB"},{"id":"T4776","span":{"begin":85,"end":88},"obj":"DT"},{"id":"T4777","span":{"begin":89,"end":97},"obj":"VBN"},{"id":"T4778","span":{"begin":98,"end":106},"obj":"NN"},{"id":"T4779","span":{"begin":107,"end":117},"obj":"NN"},{"id":"T4780","span":{"begin":118,"end":122},"obj":"IN"},{"id":"T4781","span":{"begin":123,"end":133},"obj":"VBN"},{"id":"T4782","span":{"begin":134,"end":151},"obj":"JJ"},{"id":"T4783","span":{"begin":152,"end":156},"obj":"NNP"},{"id":"T4784","span":{"begin":156,"end":157},"obj":"."}],"relations":[{"id":"R3897","pred":"nsubjpass","subj":"T4762","obj":"T4764"},{"id":"R3898","pred":"advmod","subj":"T4763","obj":"T4764"},{"id":"R3899","pred":"ROOT","subj":"T4764","obj":"T4764"},{"id":"R3900","pred":"mark","subj":"T4765","obj":"T4766"},{"id":"R3901","pred":"advcl","subj":"T4766","obj":"T4764"},{"id":"R3902","pred":"dobj","subj":"T4767","obj":"T4766"},{"id":"R3903","pred":"punct","subj":"T4768","obj":"T4767"},{"id":"R3904","pred":"appos","subj":"T4769","obj":"T4767"},{"id":"R3905","pred":"punct","subj":"T4770","obj":"T4766"},{"id":"R3906","pred":"cc","subj":"T4771","obj":"T4766"},{"id":"R3907","pred":"compound","subj":"T4772","obj":"T4773"},{"id":"R3908","pred":"nsubj","subj":"T4773","obj":"T4775"},{"id":"R3909","pred":"aux","subj":"T4774","obj":"T4775"},{"id":"R3910","pred":"ccomp","subj":"T4775","obj":"T4764"},{"id":"R3911","pred":"det","subj":"T4776","obj":"T4779"},{"id":"R3912","pred":"amod","subj":"T4777","obj":"T4779"},{"id":"R3913","pred":"compound","subj":"T4778","obj":"T4779"},{"id":"R3914","pred":"dobj","subj":"T4779","obj":"T4775"},{"id":"R3915","pred":"prep","subj":"T4780","obj":"T4779"},{"id":"R3916","pred":"amod","subj":"T4781","obj":"T4783"},{"id":"R3917","pred":"compound","subj":"T4782","obj":"T4783"},{"id":"R3918","pred":"pobj","subj":"T4783","obj":"T4780"},{"id":"R3919","pred":"punct","subj":"T4784","obj":"T4775"}],"attributes":[{"subj":"T4762","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4763","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4764","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4765","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4766","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4767","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4768","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4769","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4770","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4771","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4772","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4773","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4774","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4775","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4776","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4777","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4778","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4779","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4780","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4781","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4782","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4783","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T4784","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T5378","span":{"begin":98,"end":117},"obj":"http://purl.obolibrary.org/obo/GO_0001816"},{"id":"T5383","span":{"begin":62,"end":71},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T5401","span":{"begin":39,"end":43},"obj":"http://purl.obolibrary.org/obo/GO_0008384"},{"id":"T5405","span":{"begin":57,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T5410","span":{"begin":57,"end":71},"obj":"http://purl.obolibrary.org/obo/GO_0000165"}],"attributes":[{"subj":"T5378","pred":"source","obj":"GO-BP"},{"subj":"T5383","pred":"source","obj":"GO-BP"},{"subj":"T5401","pred":"source","obj":"GO-BP"},{"subj":"T5405","pred":"source","obj":"GO-BP"},{"subj":"T5410","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T5421","span":{"begin":39,"end":43},"obj":"http://purl.obolibrary.org/obo/GO_0008384"},{"id":"T5425","span":{"begin":57,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0004707"}],"attributes":[{"subj":"T5421","pred":"source","obj":"GO-MF"},{"subj":"T5425","pred":"source","obj":"GO-MF"}]},{"project":"sentences","denotations":[{"id":"T4484","span":{"begin":0,"end":157},"obj":"Sentence"},{"id":"T103","span":{"begin":0,"end":157},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T4484","pred":"source","obj":"sentences"},{"subj":"T103","pred":"source","obj":"sentences"}]},{"project":"events-check-again","denotations":[{"id":"T5597","span":{"begin":39,"end":43},"obj":"Protein"},{"id":"T5598","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T5599","span":{"begin":134,"end":141},"obj":"Protein"},{"id":"T5600","span":{"begin":142,"end":151},"obj":"Negative_regulation"}],"relations":[{"id":"R4526","pred":"themeOf","subj":"T5599","obj":"T5600"}],"attributes":[{"subj":"T5597","pred":"source","obj":"events-check-again"},{"subj":"T5598","pred":"source","obj":"events-check-again"},{"subj":"T5599","pred":"source","obj":"events-check-again"},{"subj":"T5600","pred":"source","obj":"events-check-again"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T5679","span":{"begin":32,"end":37},"obj":"Protein"},{"id":"T5680","span":{"begin":39,"end":43},"obj":"Protein"},{"id":"T5681","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T5682","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T5683","span":{"begin":134,"end":141},"obj":"Protein"},{"id":"T5684","span":{"begin":142,"end":151},"obj":"Negative_regulation"}],"relations":[{"id":"R4567","pred":"themeOf","subj":"T5683","obj":"T5684"}],"attributes":[{"subj":"T5679","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T5680","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T5681","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T5682","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T5683","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T5684","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T4439","span":{"begin":39,"end":43},"obj":"Protein"},{"id":"T4440","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T4441","span":{"begin":134,"end":141},"obj":"Protein"},{"id":"T4442","span":{"begin":142,"end":151},"obj":"Negative_regulation"}],"relations":[{"id":"R3608","pred":"themeOf","subj":"T4441","obj":"T4442"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T4439","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T4440","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T4441","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T4442","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5334","span":{"begin":39,"end":43},"obj":"Q9UHD2"},{"id":"T5335","span":{"begin":44,"end":48},"obj":"Q14653"},{"id":"T5336","span":{"begin":134,"end":141},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T5334","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T5335","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T5336","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T4380","span":{"begin":39,"end":43},"obj":"Protein"},{"id":"T4381","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T4382","span":{"begin":134,"end":141},"obj":"Protein"},{"id":"T4383","span":{"begin":142,"end":151},"obj":"Negative_regulation"}],"relations":[{"id":"R3583","pred":"themeOf","subj":"T4382","obj":"T4383"}],"attributes":[{"subj":"T4380","pred":"source","obj":"test2"},{"subj":"T4381","pred":"source","obj":"test2"},{"subj":"T4382","pred":"source","obj":"test2"},{"subj":"T4383","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#bfec93","default":true},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ec93d9"},{"id":"GO-BP","color":"#93ece5"},{"id":"GO-MF","color":"#eccb93"},{"id":"sentences","color":"#b193ec"},{"id":"events-check-again","color":"#93ec97"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#ec93a8"},{"id":"bionlp-st-ge-2016-reference","color":"#93c2ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#dcec93"},{"id":"test2","color":"#e193ec"}]}]}}