PMC:3279418 / 14723-15010
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14781 | 0-12 | NN | denotes | Supernatants |
T14782 | 13-17 | VB | denotes | were |
T14783 | 18-27 | VB | denotes | collected |
T14784 | 28-31 | IN | denotes | for |
T14785 | 32-37 | NN | denotes | ELISA |
T14786 | 38-40 | IN | denotes | of |
T14787 | 41-46 | NN | denotes | IL10. |
T14788 | 47-48 | -LRB- | denotes | ( |
T14789 | 48-49 | NN | denotes | C |
T14790 | 49-50 | -RRB- | denotes | ) |
T14791 | 51-59 | JJ | denotes | Cultured |
T14792 | 60-62 | NN | denotes | WT |
T14793 | 63-66 | CC | denotes | and |
T14794 | 67-71 | NN | denotes | cpdm |
T14795 | 72-76 | NN | denotes | BMDC |
T14796 | 77-78 | -LRB- | denotes | ( |
T14797 | 78-83 | CD | denotes | 5×105 |
T14798 | 84-89 | NN | denotes | cells |
T14799 | 90-92 | IN | denotes | in |
T14800 | 93-96 | CD | denotes | 0.2 |
T14801 | 97-99 | NN | denotes | ml |
T14802 | 100-108 | JJ | denotes | complete |
T14803 | 109-115 | NN | denotes | medium |
T14804 | 115-116 | -RRB- | denotes | ) |
T14805 | 117-121 | VB | denotes | were |
T14806 | 122-128 | VB | denotes | washed |
T14807 | 129-132 | CC | denotes | and |
T14808 | 133-143 | VB | denotes | stimulated |
T14809 | 144-148 | IN | denotes | with |
T14810 | 149-152 | CD | denotes | 100 |
T14811 | 153-158 | NN | denotes | ng/ml |
T14812 | 159-162 | NN | denotes | LPS |
T14813 | 163-165 | CC | denotes | or |
T14814 | 166-168 | CD | denotes | 25 |
T14815 | 169-174 | NN | denotes | µg/ml |
T14816 | 175-179 | NN | denotes | poly |
T14817 | 180-181 | CD | denotes | I |
T14818 | 181-182 | -COLON- | denotes | : |
T14819 | 182-184 | NNP | denotes | C. |
T14820 | 185-187 | IN | denotes | At |
T14821 | 188-189 | CD | denotes | 0 |
T14822 | 189-190 | -COMMA- | denotes | , |
T14823 | 191-192 | CD | denotes | 1 |
T14824 | 192-193 | -COMMA- | denotes | , |
T14825 | 194-197 | CC | denotes | and |
T14826 | 198-199 | CD | denotes | 2 |
T14827 | 200-205 | NN | denotes | hours |
T14828 | 205-206 | -COMMA- | denotes | , |
T14829 | 207-212 | JJ | denotes | total |
T14830 | 213-216 | NN | denotes | RNA |
T14831 | 217-220 | VB | denotes | was |
T14832 | 221-230 | VB | denotes | extracted |
T14833 | 231-234 | CC | denotes | and |
T14834 | 235-242 | JJ | denotes | subject |
T14835 | 243-245 | TO | denotes | to |
T14836 | 246-253 | NN | denotes | qRT-PCR |
T14837 | 254-256 | TO | denotes | to |
T14838 | 257-264 | VB | denotes | measure |
T14839 | 265-268 | DT | denotes | the |
T14840 | 269-279 | NN | denotes | production |
T14841 | 280-282 | IN | denotes | of |
T14842 | 283-286 | NN | denotes | A20 |
R12386 | T14781 | T14782 | arg1Of | Supernatants,were |
R12387 | T14781 | T14783 | arg2Of | Supernatants,collected |
R12388 | T14783 | T14782 | arg2Of | collected,were |
R12389 | T14783 | T14784 | arg1Of | collected,for |
R12390 | T14783 | T14818 | arg1Of | collected,: |
R12391 | T14785 | T14784 | arg2Of | ELISA,for |
R12392 | T14785 | T14786 | arg1Of | ELISA,of |
R12393 | T14785 | T14805 | modOf | ELISA,were |
R12394 | T14787 | T14786 | arg2Of | IL10.,of |
R12395 | T14787 | T14788 | arg1Of | IL10.,( |
R12396 | T14789 | T14788 | arg2Of | C,( |
R12397 | T14790 | T14788 | arg3Of | ),( |
R12398 | T14792 | T14793 | arg1Of | WT,and |
R12399 | T14794 | T14793 | arg2Of | cpdm,and |
R12400 | T14795 | T14791 | arg1Of | BMDC,Cultured |
R12401 | T14795 | T14792 | arg1Of | BMDC,WT |
R12402 | T14795 | T14794 | arg1Of | BMDC,cpdm |
R12403 | T14795 | T14796 | arg1Of | BMDC,( |
R12404 | T14795 | T14805 | arg1Of | BMDC,were |
R12405 | T14795 | T14806 | arg2Of | BMDC,washed |
R12406 | T14795 | T14808 | arg2Of | BMDC,stimulated |
R12407 | T14798 | T14796 | arg2Of | cells,( |
R12408 | T14798 | T14797 | arg1Of | cells,5×105 |
R12409 | T14798 | T14799 | arg1Of | cells,in |
R12410 | T14803 | T14799 | arg2Of | medium,in |
R12411 | T14803 | T14800 | arg1Of | medium,0.2 |
R12412 | T14803 | T14801 | arg1Of | medium,ml |
R12413 | T14803 | T14802 | arg1Of | medium,complete |
R12414 | T14804 | T14796 | arg3Of | ),( |
R12415 | T14806 | T14807 | arg1Of | washed,and |
R12416 | T14807 | T14805 | arg2Of | and,were |
R12417 | T14807 | T14809 | arg1Of | and,with |
R12418 | T14808 | T14807 | arg2Of | stimulated,and |
R12419 | T14810 | T14811 | arg1Of | 100,ng/ml |
R12420 | T14812 | T14810 | arg1Of | LPS,100 |
R12421 | T14812 | T14813 | arg1Of | LPS,or |
R12422 | T14813 | T14809 | arg2Of | or,with |
R12423 | T14816 | T14813 | arg2Of | poly,or |
R12424 | T14816 | T14814 | arg1Of | poly,25 |
R12425 | T14816 | T14815 | arg1Of | poly,µg/ml |
R12426 | T14816 | T14817 | arg1Of | poly,I |
R12427 | T14819 | T14838 | arg2Of | C.,measure |
R12428 | T14821 | T14822 | arg1Of | 0,"," |
R12429 | T14822 | T14825 | arg1Of | ",",and |
R12430 | T14823 | T14822 | arg2Of | 1,"," |
R12431 | T14825 | T14820 | arg2Of | and,At |
R12432 | T14825 | T14824 | arg1Of | and,"," |
R12433 | T14827 | T14825 | arg2Of | hours,and |
R12434 | T14827 | T14826 | arg1Of | hours,2 |
R12435 | T14830 | T14829 | arg1Of | RNA,total |
R12436 | T14830 | T14831 | arg1Of | RNA,was |
R12437 | T14830 | T14832 | arg2Of | RNA,extracted |
R12438 | T14830 | T14834 | arg1Of | RNA,subject |
R12439 | T14832 | T14833 | arg1Of | extracted,and |
R12440 | T14833 | T14818 | arg2Of | and,: |
R12441 | T14833 | T14820 | arg1Of | and,At |
R12442 | T14833 | T14828 | arg1Of | and,"," |
R12443 | T14833 | T14831 | arg2Of | and,was |
R12444 | T14833 | T14837 | modOf | and,to |
R12445 | T14834 | T14833 | arg2Of | subject,and |
R12446 | T14834 | T14835 | arg1Of | subject,to |
R12447 | T14836 | T14835 | arg2Of | qRT-PCR,to |
R12448 | T14838 | T14837 | arg1Of | measure,to |
R12449 | T14840 | T14838 | arg3Of | production,measure |
R12450 | T14840 | T14839 | arg1Of | production,the |
R12451 | T14840 | T14841 | arg1Of | production,of |
R12452 | T14842 | T14841 | arg2Of | A20,of |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14639 | 49-50 | -RRB- | denotes | ) |
T14640 | 51-59 | NNP | denotes | Cultured |
T14641 | 60-62 | NNP | denotes | WT |
T14642 | 63-66 | CC | denotes | and |
T14643 | 67-71 | VB | denotes | cpdm |
T14644 | 72-76 | NNP | denotes | BMDC |
T14645 | 77-78 | -LRB- | denotes | ( |
T14646 | 78-79 | CD | denotes | 5 |
T14647 | 79-80 | CD | denotes | × |
T14688 | 0-12 | NNS | denotes | Supernatants |
T14689 | 13-17 | VBD | denotes | were |
T14690 | 18-27 | VBN | denotes | collected |
T14691 | 28-31 | IN | denotes | for |
T14692 | 32-37 | NNP | denotes | ELISA |
T14693 | 38-40 | IN | denotes | of |
T14694 | 41-45 | NNP | denotes | IL10 |
T14695 | 45-46 | . | denotes | . |
T14696 | 47-48 | -LRB- | denotes | ( |
T14697 | 48-49 | NNP | denotes | C |
T14860 | 129-132 | CC | denotes | and |
T14861 | 133-143 | VBN | denotes | stimulated |
T14862 | 144-148 | IN | denotes | with |
T14863 | 149-152 | CD | denotes | 100 |
T14864 | 153-158 | JJ | denotes | ng/ml |
T14865 | 159-162 | NNP | denotes | LPS |
T14866 | 163-165 | CC | denotes | or |
T14867 | 166-168 | CD | denotes | 25 |
T14868 | 169-171 | NN | denotes | µg |
T14869 | 171-172 | NN | denotes | / |
T14870 | 172-174 | NN | denotes | ml |
T14871 | 175-179 | NN | denotes | poly |
T14872 | 180-181 | PRP | denotes | I |
T14873 | 181-182 | : | denotes | : |
T14874 | 182-183 | NNP | denotes | C |
T14875 | 183-184 | . | denotes | . |
T14876 | 185-187 | IN | denotes | At |
T14877 | 188-189 | CD | denotes | 0 |
T14878 | 189-190 | , | denotes | , |
T14879 | 191-192 | CD | denotes | 1 |
T14880 | 192-193 | , | denotes | , |
T14881 | 194-197 | CC | denotes | and |
T14882 | 198-199 | CD | denotes | 2 |
T14883 | 200-205 | NNS | denotes | hours |
T14884 | 205-206 | , | denotes | , |
T14885 | 207-212 | JJ | denotes | total |
T14886 | 213-216 | NNP | denotes | RNA |
T14887 | 217-220 | VBD | denotes | was |
T14888 | 221-230 | VBN | denotes | extracted |
T14889 | 231-234 | CC | denotes | and |
T14890 | 235-242 | JJ | denotes | subject |
T14891 | 243-245 | TO | denotes | to |
T14892 | 246-253 | NNP | denotes | qRT-PCR |
T14893 | 254-256 | TO | denotes | to |
T14894 | 257-264 | VB | denotes | measure |
T14895 | 265-268 | DT | denotes | the |
T14896 | 269-279 | NN | denotes | production |
T14897 | 280-282 | IN | denotes | of |
T14898 | 283-286 | NNP | denotes | A20 |
T14899 | 286-287 | . | denotes | . |
T14843 | 80-83 | CD | denotes | 105 |
T14844 | 84-89 | NNS | denotes | cells |
T14845 | 90-92 | IN | denotes | in |
T14846 | 93-96 | CD | denotes | 0.2 |
T14847 | 97-99 | NN | denotes | ml |
T14848 | 100-108 | JJ | denotes | complete |
T14849 | 109-115 | NN | denotes | medium |
T14850 | 115-116 | -RRB- | denotes | ) |
T14851 | 117-121 | VBD | denotes | were |
T14852 | 122-128 | VBN | denotes | washed |
R12243 | T14639 | T14697 | punct | ),C |
R12244 | T14640 | T14641 | compound | Cultured,WT |
R12245 | T14641 | T14852 | nsubjpass | WT,washed |
R12246 | T14642 | T14641 | cc | and,WT |
R12247 | T14643 | T14644 | compound | cpdm,BMDC |
R12248 | T14644 | T14641 | conj | BMDC,WT |
R12249 | T14645 | T14646 | punct | (,5 |
R12250 | T14646 | T14844 | nummod | 5,cells |
R12251 | T14647 | T14844 | nummod | ×,cells |
R12292 | T14688 | T14690 | nsubjpass | Supernatants,collected |
R12293 | T14689 | T14690 | auxpass | were,collected |
R12294 | T14690 | T14690 | ROOT | collected,collected |
R12295 | T14691 | T14690 | prep | for,collected |
R12296 | T14692 | T14691 | pobj | ELISA,for |
R12297 | T14693 | T14692 | prep | of,ELISA |
R12298 | T14694 | T14693 | pobj | IL10,of |
R12299 | T14695 | T14690 | punct | .,collected |
R12300 | T14696 | T14641 | punct | (,WT |
R12301 | T14697 | T14641 | compound | C,WT |
R12453 | T14843 | T14844 | nummod | 105,cells |
R12454 | T14844 | T14641 | appos | cells,WT |
R12455 | T14845 | T14844 | prep | in,cells |
R12456 | T14846 | T14847 | nummod | 0.2,ml |
R12457 | T14847 | T14849 | amod | ml,medium |
R12458 | T14848 | T14849 | amod | complete,medium |
R12459 | T14849 | T14845 | pobj | medium,in |
R12460 | T14850 | T14844 | punct | ),cells |
R12461 | T14851 | T14852 | auxpass | were,washed |
R12462 | T14852 | T14852 | ROOT | washed,washed |
R12463 | T14860 | T14852 | cc | and,washed |
R12464 | T14861 | T14852 | conj | stimulated,washed |
R12465 | T14862 | T14861 | prep | with,stimulated |
R12466 | T14863 | T14865 | nummod | 100,LPS |
R12467 | T14864 | T14865 | compound | ng/ml,LPS |
R12468 | T14865 | T14862 | pobj | LPS,with |
R12469 | T14866 | T14865 | cc | or,LPS |
R12470 | T14867 | T14871 | nummod | 25,poly |
R12471 | T14868 | T14871 | nmod | µg,poly |
R12472 | T14869 | T14871 | nmod | /,poly |
R12473 | T14870 | T14871 | compound | ml,poly |
R12474 | T14871 | T14874 | compound | poly,C |
R12475 | T14872 | T14874 | compound | I,C |
R12476 | T14873 | T14872 | punct | :,I |
R12477 | T14874 | T14865 | conj | C,LPS |
R12478 | T14875 | T14852 | punct | .,washed |
R12479 | T14876 | T14888 | prep | At,extracted |
R12480 | T14877 | T14883 | nummod | 0,hours |
R12481 | T14878 | T14879 | dobj | ",",1 |
R12482 | T14879 | T14877 | appos | 1,0 |
R12483 | T14880 | T14877 | punct | ",",0 |
R12484 | T14881 | T14877 | cc | and,0 |
R12485 | T14882 | T14877 | conj | 2,0 |
R12486 | T14883 | T14876 | pobj | hours,At |
R12487 | T14884 | T14888 | punct | ",",extracted |
R12488 | T14885 | T14886 | amod | total,RNA |
R12489 | T14886 | T14888 | nsubjpass | RNA,extracted |
R12490 | T14887 | T14888 | auxpass | was,extracted |
R12491 | T14888 | T14888 | ROOT | extracted,extracted |
R12492 | T14889 | T14888 | cc | and,extracted |
R12493 | T14890 | T14888 | conj | subject,extracted |
R12494 | T14891 | T14890 | prep | to,subject |
R12495 | T14892 | T14891 | pobj | qRT-PCR,to |
R12496 | T14893 | T14894 | aux | to,measure |
R12497 | T14894 | T14890 | xcomp | measure,subject |
R12498 | T14895 | T14896 | det | the,production |
R12499 | T14896 | T14894 | dobj | production,measure |
R12500 | T14897 | T14896 | prep | of,production |
R12501 | T14898 | T14897 | pobj | A20,of |
R12502 | T14899 | T14888 | punct | .,extracted |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14907 | 84-89 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14583 | 0-287 | Sentence | denotes | Supernatants were collected for ELISA of IL10. (C) Cultured WT and cpdm BMDC (5×105 cells in 0.2 ml complete medium) were washed and stimulated with 100 ng/ml LPS or 25 µg/ml poly I:C. At 0, 1, and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the production of A20. |
T100 | 0-184 | Sentence | denotes | Supernatants were collected for ELISA of IL10. (C) Cultured WT and cpdm BMDC (5×105 cells in 0.2 ml complete medium) were washed and stimulated with 100 ng/ml LPS or 25 µg/ml poly I:C. |
T101 | 185-287 | Sentence | denotes | At 0, 1, and 2 hours, total RNA was extracted and subject to qRT-PCR to measure the production of A20. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T14950 | 41-45 | Protein | denotes | IL10 | |
T14951 | 269-279 | Gene_expression | denotes | production | true |
T14952 | 283-286 | Protein | denotes | A20 | |
R12529 | T14952 | T14951 | themeOf | A20,production |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14965 | 41-45 | Protein | denotes | IL10 |
T14966 | 246-249 | Protein | denotes | qRT |
T14967 | 283-286 | Protein | denotes | A20 |
T14968 | 269-279 | Gene_expression | denotes | production |
R12536 | T14967 | T14968 | themeOf | A20,production |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T14577 | 41-45 | Protein | denotes | IL10 | |
T14578 | 269-279 | Gene_expression | denotes | production | true |
T14579 | 283-286 | Protein | denotes | A20 | |
R12187 | T14579 | T14578 | themeOf | A20,production |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14858 | 41-45 | P22301 | denotes | IL10 |
T14859 | 283-286 | P21580 | denotes | A20 |
test2
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T14562 | 41-45 | Protein | denotes | IL10 | true |
T14563 | 269-279 | Gene_expression | denotes | production | |
T14564 | 283-286 | Protein | denotes | A20 | |
R12178 | T14564 | T14563 | themeOf | A20,production |