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PMC:3279418 / 11346-12341 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22348129-17538631-89575682 712-713 17538631 denotes 2
T59339 712-713 17538631 denotes 2

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14018 44-53 JJ denotes Defective
T14019 54-64 NN denotes production
T14020 65-67 IN denotes of
T14021 68-84 JJ denotes pro-inflammatory
T14022 85-94 NN denotes mediators
T14023 95-99 IN denotes from
T14024 100-110 VB denotes stimulated
T14025 111-115 NN denotes cpdm
T14026 116-120 NN denotes BMDC
T14027 122-123 -LRB- denotes (
T14028 123-126 NN denotes A–D
T14029 126-127 -RRB- denotes )
T14030 128-136 JJ denotes Cultured
T14031 137-139 NN denotes WT
T14032 140-143 CC denotes and
T14033 144-148 NN denotes cpdm
T14034 149-153 NN denotes BMDC
T14035 154-155 -LRB- denotes (
T14036 155-160 CD denotes 1×105
T14037 161-166 NN denotes cells
T14038 167-169 IN denotes in
T14039 170-173 CD denotes 0.1
T14040 174-176 NN denotes ml
T14041 177-185 JJ denotes complete
T14042 186-192 NN denotes medium
T14043 192-193 -RRB- denotes )
T14044 194-198 VB denotes were
T14045 199-205 VB denotes washed
T14046 206-209 CC denotes and
T14047 210-220 VB denotes stimulated
T14048 221-225 IN denotes with
T14049 226-232 NN denotes medium
T14050 232-233 -COMMA- denotes ,
T14051 234-237 CD denotes 100
T14052 238-243 NN denotes ng/ml
T14053 244-247 NN denotes LPS
T14054 248-250 CC denotes or
T14055 251-253 CD denotes 25
T14056 254-259 NN denotes µg/ml
T14057 260-264 NN denotes poly
T14058 265-266 NN denotes I
T14059 266-267 -COLON- denotes :
T14060 267-268 NN denotes C
T14061 269-272 IN denotes for
T14062 273-275 CD denotes 24
T14063 276-281 NN denotes hours
T14064 283-295 NN denotes Supernatants
T14065 296-300 VB denotes were
T14066 301-310 VB denotes collected
T14067 311-314 IN denotes for
T14068 315-320 NN denotes ELISA
T14069 321-323 IN denotes of
T14070 324-331 NN denotes IL12P70
T14071 331-332 -COMMA- denotes ,
T14072 333-336 NN denotes IL6
T14073 336-337 -COMMA- denotes ,
T14074 338-341 CC denotes and
T14075 342-347 NN denotes GMCSF
T14076 347-348 -COMMA- denotes ,
T14077 349-352 CC denotes and
T14078 353-356 IN denotes for
T14079 357-371 NN denotes quantification
T14080 372-374 IN denotes of
T14081 375-381 JJ denotes nitric
T14082 382-387 NN denotes oxide
T14083 388-389 -LRB- denotes (
T14084 389-391 NN denotes NO
T14085 391-392 -RRB- denotes )
T14086 392-393 -LRB- denotes .
T14087 394-397 NN denotes (E–
T14088 397-398 -RRB- denotes F
T14089 398-406 NN denotes ) Gradie
T14090 406-413 NN denotes nt numb
T14091 413-414 -LRB- denotes e
T14092 414-419 CD denotes rs (1
T14093 419-420 -COMMA- denotes ×
T14094 420-425 CD denotes 104,
T14095 425-426 -COMMA- denotes 2
T14096 426-429 CC denotes ×10
T14097 429-434 CD denotes 4, an
T14098 434-439 NN denotes d 4×1
T14099 439-441 IN denotes 04
T14100 442-445 CD denotes cel
T14101 445-447 NN denotes ls
T14102 448-456 JJ denotes in 0.1 m
T14103 456-462 NN denotes L comp
T14104 462-463 -RRB- denotes l
T14105 463-465 IN denotes et
T14106 465-469 NN denotes e me
T14107 469-473 VB denotes dium
T14108 473-477 VB denotes ) of
T14109 478-484 NN denotes BMDC w
T14110 484-489 NN denotes ere u
T14111 489-492 NN denotes sed
T14112 493-504 NN denotes for100 ng/m
T14113 523-528 IN denotes After
T14114 529-531 CD denotes 24
T14115 532-537 NN denotes hours
T14116 537-538 -COMMA- denotes ,
T14117 539-542 DT denotes the
T14118 543-550 NN denotes amounts
T14119 551-553 IN denotes of
T14120 554-561 NN denotes IL12P70
T14121 562-565 CC denotes and
T14122 566-569 NN denotes IL6
T14123 570-574 IN denotes from
T14124 575-578 DT denotes the
T14125 579-590 NN denotes supernatant
T14126 591-595 VB denotes were
T14127 596-605 VB denotes measured.
T14128 606-607 -LRB- denotes (
T14129 607-608 NN denotes G
T14130 608-609 -RRB- denotes )
T14131 610-613 DT denotes The
T14132 614-618 NN denotes cpdm
T14133 619-623 NN denotes mice
T14134 624-631 VB denotes rescued
T14135 632-634 IN denotes by
T14136 635-653 JJ denotes Sharpin-containing
T14137 654-657 NN denotes BAC
T14138 658-661 VB denotes had
T14139 662-670 JJ denotes complete
T14140 671-680 NN denotes remission
T14141 681-683 IN denotes of
T14142 684-687 DT denotes the
T14143 688-700 JJ denotes inflammatory
T14144 701-710 NN denotes phenotype
T14145 711-712 -LRB- denotes [
T14146 712-713 CD denotes 2
T14147 713-714 -RRB- denotes ]
T14148 716-720 NN denotes BMDC
T14149 721-730 VB denotes developed
T14150 731-735 IN denotes from
T14151 736-740 NN denotes cpdm
T14152 741-744 CC denotes and
T14153 745-752 VB denotes rescued
T14154 753-757 NN denotes cpdm
T14155 758-762 NN denotes mice
T14156 763-767 VB denotes were
T14157 768-774 VB denotes plated
T14158 775-776 -LRB- denotes (
T14159 776-781 CD denotes 1×106
T14160 782-787 NN denotes cells
T14161 788-790 IN denotes in
T14162 791-794 CD denotes 0.3
T14163 795-797 NN denotes mL
T14164 797-798 -RRB- denotes )
T14165 799-802 CC denotes and
T14166 803-813 VB denotes stimulated
T14167 814-818 IN denotes with
T14168 819-822 CD denotes 100
T14169 823-828 NN denotes ng/mL
T14170 829-832 NN denotes LPS
T14171 834-839 IN denotes After
T14172 840-842 CD denotes 24
T14173 843-848 NN denotes hours
T14174 848-849 -COMMA- denotes ,
T14175 850-862 NN denotes supernatants
T14176 863-867 VB denotes were
T14177 868-877 VB denotes collected
T14178 878-881 IN denotes for
T14179 882-890 NN denotes analysis
T14180 891-893 IN denotes of
T14181 894-901 NN denotes IL12P70
T14182 902-912 NN denotes production
T14183 914-918 NN denotes Data
T14184 919-922 VB denotes are
T14185 923-937 JJ denotes representative
T14186 938-940 IN denotes of
T14187 941-946 CD denotes three
T14188 947-958 JJ denotes independent
T14189 959-971 NN denotes experiments.
T14190 972-973 SYM denotes *
T14191 974-975 NN denotes P
T14192 975-976 SYM denotes <
T14193 976-980 CD denotes 0.01
T14194 980-981 -COLON- denotes ;
T14195 982-984 SYM denotes **
T14196 985-986 NN denotes P
T14197 986-987 SYM denotes <
T14198 987-992 CD denotes 0.005
R11703 T14019 T14018 arg1Of production,Defective
R11704 T14019 T14020 arg1Of production,of
R11705 T14022 T14020 arg2Of mediators,of
R11706 T14022 T14021 arg1Of mediators,pro-inflammatory
R11707 T14022 T14023 arg1Of mediators,from
R11708 T14026 T14023 arg2Of BMDC,from
R11709 T14026 T14024 arg2Of BMDC,stimulated
R11710 T14026 T14025 arg1Of BMDC,cpdm
R11711 T14028 T14027 arg2Of A–D,(
R11712 T14029 T14027 arg3Of ),(
R11713 T14031 T14032 arg1Of WT,and
R11714 T14033 T14032 arg2Of cpdm,and
R11715 T14034 T14027 arg1Of BMDC,(
R11716 T14034 T14030 arg1Of BMDC,Cultured
R11717 T14034 T14031 arg1Of BMDC,WT
R11718 T14034 T14033 arg1Of BMDC,cpdm
R11719 T14034 T14035 arg1Of BMDC,(
R11720 T14034 T14044 arg1Of BMDC,were
R11721 T14034 T14045 arg2Of BMDC,washed
R11722 T14034 T14047 arg2Of BMDC,stimulated
R11723 T14037 T14035 arg2Of cells,(
R11724 T14037 T14036 arg1Of cells,1×105
R11725 T14037 T14038 arg1Of cells,in
R11726 T14042 T14038 arg2Of medium,in
R11727 T14042 T14039 arg1Of medium,0.1
R11728 T14042 T14040 arg1Of medium,ml
R11729 T14042 T14041 arg1Of medium,complete
R11730 T14043 T14035 arg3Of ),(
R11731 T14045 T14046 arg1Of washed,and
R11732 T14046 T14044 arg2Of and,were
R11733 T14046 T14048 arg1Of and,with
R11734 T14047 T14046 arg2Of stimulated,and
R11735 T14049 T14050 arg1Of medium,","
R11736 T14050 T14054 arg1Of ",",or
R11737 T14051 T14052 arg1Of 100,ng/ml
R11738 T14053 T14050 arg2Of LPS,","
R11739 T14053 T14051 arg1Of LPS,100
R11740 T14054 T14048 arg2Of or,with
R11741 T14058 T14057 arg1Of I,poly
R11742 T14058 T14059 arg1Of I,:
R11743 T14060 T14054 arg2Of C,or
R11744 T14060 T14055 arg1Of C,25
R11745 T14060 T14056 arg1Of C,µg/ml
R11746 T14060 T14058 arg1Of C,I
R11747 T14060 T14061 arg1Of C,for
R11748 T14063 T14061 arg2Of hours,for
R11749 T14063 T14062 arg1Of hours,24
R11750 T14064 T14065 arg1Of Supernatants,were
R11751 T14064 T14066 arg2Of Supernatants,collected
R11752 T14066 T14065 arg2Of collected,were
R11753 T14066 T14067 arg1Of collected,for
R11754 T14068 T14067 arg2Of ELISA,for
R11755 T14068 T14069 arg1Of ELISA,of
R11756 T14068 T14078 arg1Of ELISA,for
R11757 T14069 T14077 arg1Of of,and
R11758 T14070 T14071 arg1Of IL12P70,","
R11759 T14071 T14074 arg1Of ",",and
R11760 T14072 T14071 arg2Of IL6,","
R11761 T14074 T14069 arg2Of and,of
R11762 T14074 T14073 arg1Of and,","
R11763 T14075 T14074 arg2Of GMCSF,and
R11764 T14077 T14076 arg1Of and,","
R11765 T14078 T14077 arg2Of for,and
R11766 T14079 T14078 arg2Of quantification,for
R11767 T14079 T14080 arg1Of quantification,of
R11768 T14082 T14080 arg2Of oxide,of
R11769 T14082 T14081 arg1Of oxide,nitric
R11770 T14082 T14083 arg1Of oxide,(
R11771 T14082 T14107 modOf oxide,dium
R11772 T14084 T14083 arg2Of NO,(
R11773 T14085 T14083 arg3Of ),(
R11774 T14087 T14086 arg2Of (E–,.
R11775 T14088 T14086 arg3Of F,.
R11776 T14090 T14086 arg1Of nt numb,.
R11777 T14090 T14089 arg1Of nt numb,) Gradie
R11778 T14090 T14091 arg1Of nt numb,e
R11779 T14090 T14105 arg1Of nt numb,et
R11780 T14090 T14107 arg1Of nt numb,dium
R11781 T14090 T14108 arg2Of nt numb,) of
R11782 T14092 T14093 arg1Of rs (1,×
R11783 T14093 T14096 arg1Of ×,×10
R11784 T14094 T14093 arg2Of "104, ",×
R11785 T14096 T14091 arg2Of ×10,e
R11786 T14096 T14095 arg1Of ×10,2
R11787 T14098 T14096 arg2Of d 4×1,×10
R11788 T14098 T14097 arg1Of d 4×1,"4, an"
R11789 T14098 T14099 arg1Of d 4×1,04
R11790 T14103 T14099 arg2Of L comp,04
R11791 T14103 T14100 arg1Of L comp,cel
R11792 T14103 T14101 arg1Of L comp,ls
R11793 T14103 T14102 arg1Of L comp,in 0.1 m
R11794 T14104 T14091 arg3Of l,e
R11795 T14106 T14105 arg2Of e me,et
R11796 T14108 T14107 arg2Of ) of,dium
R11797 T14112 T14108 arg3Of for100 ng/m,) of
R11798 T14112 T14109 arg1Of for100 ng/m,BMDC w
R11799 T14112 T14110 arg1Of for100 ng/m,ere u
R11800 T14112 T14111 arg1Of for100 ng/m,sed
R11801 T14114 T14113 arg2Of 24,After
R11802 T14115 T14126 modOf hours,were
R11803 T14115 T14134 arg2Of hours,rescued
R11804 T14115 T14138 arg1Of hours,had
R11805 T14118 T14117 arg1Of amounts,the
R11806 T14118 T14119 arg1Of amounts,of
R11807 T14118 T14123 arg1Of amounts,from
R11808 T14118 T14126 arg1Of amounts,were
R11809 T14118 T14127 arg2Of amounts,measured.
R11810 T14120 T14121 arg1Of IL12P70,and
R11811 T14121 T14119 arg2Of and,of
R11812 T14122 T14121 arg2Of IL6,and
R11813 T14125 T14123 arg2Of supernatant,from
R11814 T14125 T14124 arg1Of supernatant,the
R11815 T14127 T14116 arg1Of measured.,","
R11816 T14127 T14126 arg2Of measured.,were
R11817 T14127 T14128 arg1Of measured.,(
R11818 T14129 T14128 arg2Of G,(
R11819 T14130 T14128 arg3Of ),(
R11820 T14133 T14127 arg3Of mice,measured.
R11821 T14133 T14131 arg1Of mice,The
R11822 T14133 T14132 arg1Of mice,cpdm
R11823 T14137 T14134 arg1Of BAC,rescued
R11824 T14137 T14135 arg2Of BAC,by
R11825 T14137 T14136 arg1Of BAC,Sharpin-containing
R11826 T14138 T14113 arg1Of had,After
R11827 T14138 T14145 arg1Of had,[
R11828 T14140 T14138 arg2Of remission,had
R11829 T14140 T14139 arg1Of remission,complete
R11830 T14140 T14141 arg1Of remission,of
R11831 T14144 T14141 arg2Of phenotype,of
R11832 T14144 T14142 arg1Of phenotype,the
R11833 T14144 T14143 arg1Of phenotype,inflammatory
R11834 T14146 T14145 arg2Of 2,[
R11835 T14147 T14145 arg3Of ],[
R11836 T14148 T14149 arg1Of BMDC,developed
R11837 T14148 T14153 arg1Of BMDC,rescued
R11838 T14148 T14166 arg2Of BMDC,stimulated
R11839 T14149 T14150 arg1Of developed,from
R11840 T14149 T14152 arg1Of developed,and
R11841 T14151 T14150 arg2Of cpdm,from
R11842 T14153 T14161 arg1Of rescued,in
R11843 T14153 T14165 arg1Of rescued,and
R11844 T14154 T14156 modOf cpdm,were
R11845 T14155 T14156 arg1Of mice,were
R11846 T14155 T14157 arg2Of mice,plated
R11847 T14157 T14156 arg2Of plated,were
R11848 T14160 T14153 arg2Of cells,rescued
R11849 T14160 T14154 arg1Of cells,cpdm
R11850 T14160 T14158 arg1Of cells,(
R11851 T14160 T14159 arg1Of cells,1×106
R11852 T14163 T14161 arg2Of mL,in
R11853 T14163 T14162 arg1Of mL,0.3
R11854 T14163 T14164 arg1Of mL,)
R11855 T14165 T14152 arg2Of and,and
R11856 T14166 T14165 arg2Of stimulated,and
R11857 T14166 T14167 arg1Of stimulated,with
R11858 T14168 T14169 arg1Of 100,ng/mL
R11859 T14170 T14167 arg2Of LPS,with
R11860 T14170 T14168 arg1Of LPS,100
R11861 T14173 T14171 arg2Of hours,After
R11862 T14173 T14172 arg1Of hours,24
R11863 T14175 T14176 arg1Of supernatants,were
R11864 T14175 T14177 arg2Of supernatants,collected
R11865 T14177 T14171 arg1Of collected,After
R11866 T14177 T14174 arg1Of collected,","
R11867 T14177 T14176 arg2Of collected,were
R11868 T14177 T14178 arg1Of collected,for
R11869 T14179 T14178 arg2Of analysis,for
R11870 T14179 T14180 arg1Of analysis,of
R11871 T14182 T14180 arg2Of production,of
R11872 T14182 T14181 arg1Of production,IL12P70
R11873 T14183 T14184 arg1Of Data,are
R11874 T14183 T14185 arg1Of Data,representative
R11875 T14185 T14184 arg2Of representative,are
R11876 T14185 T14186 arg1Of representative,of
R11877 T14185 T14193 arg1Of representative,0.01
R11878 T14189 T14186 arg2Of experiments.,of
R11879 T14189 T14187 arg1Of experiments.,three
R11880 T14189 T14188 arg1Of experiments.,independent
R11881 T14193 T14190 arg1Of 0.01,*
R11882 T14193 T14191 arg1Of 0.01,P
R11883 T14193 T14192 arg1Of 0.01,<
R11884 T14193 T14194 arg1Of 0.01,;
R11885 T14198 T14194 arg2Of 0.005,;
R11886 T14198 T14195 arg1Of 0.005,**
R11887 T14198 T14196 arg1Of 0.005,P
R11888 T14198 T14197 arg1Of 0.005,<

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13813 44-53 JJ denotes Defective
T13814 54-64 NN denotes production
T13815 65-67 IN denotes of
T13816 68-84 JJ denotes pro-inflammatory
T13817 85-94 NNS denotes mediators
T13818 95-99 IN denotes from
T13819 100-110 VBN denotes stimulated
T13820 111-115 NN denotes cpdm
T13821 116-120 NNP denotes BMDC
T13822 120-121 . denotes .
T13823 122-123 -LRB- denotes (
T13824 123-124 DT denotes A
T13825 125-126 NNP denotes D
T13826 126-127 -RRB- denotes )
T13827 128-136 NNP denotes Cultured
T13828 137-139 NNP denotes WT
T13829 140-143 CC denotes and
T13830 144-148 VB denotes cpdm
T13831 149-153 NNP denotes BMDC
T13832 154-155 -LRB- denotes (
T13833 155-156 CD denotes 1
T13834 156-157 CD denotes ×
T13835 157-160 CD denotes 105
T13836 161-166 NNS denotes cells
T13837 167-169 IN denotes in
T13838 170-173 CD denotes 0.1
T13839 174-176 NN denotes ml
T13840 177-185 JJ denotes complete
T13841 186-192 NN denotes medium
T13842 192-193 -RRB- denotes )
T13843 194-198 VBD denotes were
T13844 199-205 VBN denotes washed
T13845 206-209 CC denotes and
T13846 210-220 VBN denotes stimulated
T13847 221-225 IN denotes with
T13848 226-232 NN denotes medium
T13849 232-233 , denotes ,
T13850 234-237 CD denotes 100
T13851 238-243 JJ denotes ng/ml
T13852 244-247 NNP denotes LPS
T13853 248-250 CC denotes or
T13854 251-253 CD denotes 25
T13855 254-256 NN denotes µg
T13856 256-257 NN denotes /
T13857 257-259 NN denotes ml
T13858 260-264 NN denotes poly
T13859 265-266 PRP denotes I
T13860 266-267 : denotes :
T13861 267-268 NNP denotes C
T13862 269-272 IN denotes for
T13863 273-275 CD denotes 24
T13864 276-281 NNS denotes hours
T13865 281-282 . denotes .
T13866 283-295 NNS denotes Supernatants
T13867 296-300 VBD denotes were
T13868 301-310 VBN denotes collected
T13869 311-314 IN denotes for
T13870 315-320 NNP denotes ELISA
T13871 321-323 IN denotes of
T13872 324-331 NNP denotes IL12P70
T13873 331-332 , denotes ,
T13874 333-336 NNP denotes IL6
T13875 336-337 , denotes ,
T13876 338-341 CC denotes and
T13877 342-347 NNP denotes GMCSF
T13878 347-348 , denotes ,
T13879 349-352 CC denotes and
T13880 353-356 IN denotes for
T13881 357-371 NN denotes quantification
T13882 372-374 IN denotes of
T13883 375-381 JJ denotes nitric
T13884 382-387 NN denotes oxide
T13885 388-389 -LRB- denotes (
T13886 389-391 UH denotes NO
T13887 391-392 -RRB- denotes )
T13888 392-393 . denotes .
T13889 394-395 -LRB- denotes (
T13890 395-396 NNP denotes E
T13891 397-398 NN denotes F
T13892 398-399 -RRB- denotes )
T13893 400-408 NNP denotes Gradient
T13894 409-416 NNS denotes numbers
T13895 417-418 -LRB- denotes (
T13896 418-419 CD denotes 1
T13897 419-420 CD denotes ×
T13898 420-423 CD denotes 104
T13899 423-424 , denotes ,
T13900 425-426 CD denotes 2
T13901 426-427 CD denotes ×
T13902 427-430 CD denotes 104
T13903 430-431 , denotes ,
T13904 432-435 CC denotes and
T13905 436-437 CD denotes 4
T13906 437-438 NN denotes ×
T13907 438-441 CD denotes 104
T13908 442-447 NNS denotes cells
T13909 448-450 IN denotes in
T13910 451-454 CD denotes 0.1
T13911 455-457 NNP denotes mL
T13912 458-466 JJ denotes complete
T13913 467-473 NN denotes medium
T13914 473-474 -RRB- denotes )
T13915 475-477 IN denotes of
T13916 478-482 NNP denotes BMDC
T13917 483-487 VBD denotes were
T13918 488-492 VBN denotes used
T13919 493-499 CD denotes for100
T13920 500-505 NNP denotes ng/mL
T13921 506-509 NNP denotes LPS
T13922 510-521 NN denotes stimulation
T13923 521-522 . denotes .
T13924 523-528 IN denotes After
T13925 529-531 CD denotes 24
T13926 532-537 NNS denotes hours
T13927 537-538 , denotes ,
T13928 539-542 DT denotes the
T13929 543-550 NNS denotes amounts
T13930 551-553 IN denotes of
T13931 554-561 NNP denotes IL12P70
T13932 562-565 CC denotes and
T13933 566-569 NNP denotes IL6
T13934 570-574 IN denotes from
T13935 575-578 DT denotes the
T13936 579-590 JJ denotes supernatant
T13937 591-595 VBD denotes were
T13938 596-604 VBN denotes measured
T13939 604-605 . denotes .
T13940 606-607 -LRB- denotes (
T13941 607-608 NNP denotes G
T13942 608-609 -RRB- denotes )
T13943 610-613 DT denotes The
T13944 614-618 NN denotes cpdm
T13945 619-623 NNS denotes mice
T13946 624-631 VBN denotes rescued
T13947 632-634 IN denotes by
T13948 635-653 VBG denotes Sharpin-containing
T13949 654-657 NNP denotes BAC
T13950 658-661 VBD denotes had
T13951 662-670 JJ denotes complete
T13952 671-680 NN denotes remission
T13953 681-683 IN denotes of
T13954 684-687 DT denotes the
T13955 688-700 JJ denotes inflammatory
T13956 701-710 NN denotes phenotype
T13957 711-712 NN denotes [
T13958 712-713 CD denotes 2
T13959 713-714 NNP denotes ]
T13960 714-715 . denotes .
T13961 716-720 NNP denotes BMDC
T13962 721-730 VBD denotes developed
T13963 731-735 IN denotes from
T13964 736-740 NN denotes cpdm
T13965 741-744 CC denotes and
T13966 745-752 VBD denotes rescued
T13967 753-757 NN denotes cpdm
T13968 758-762 NNS denotes mice
T13969 763-767 VBD denotes were
T13970 768-774 VBN denotes plated
T13971 775-776 -LRB- denotes (
T13972 776-777 CD denotes 1
T13973 777-778 CD denotes ×
T13974 778-781 CD denotes 106
T13975 782-787 NNS denotes cells
T13976 788-790 IN denotes in
T13977 791-794 CD denotes 0.3
T13978 795-797 NNP denotes mL
T13979 797-798 -RRB- denotes )
T13980 799-802 CC denotes and
T13981 803-813 VBN denotes stimulated
T13982 814-818 IN denotes with
T13983 819-822 CD denotes 100
T13984 823-828 NNP denotes ng/mL
T13985 829-832 NNP denotes LPS
T13986 832-833 . denotes .
T13987 834-839 IN denotes After
T13988 840-842 CD denotes 24
T13989 843-848 NNS denotes hours
T13990 848-849 , denotes ,
T13991 850-862 NNS denotes supernatants
T13992 863-867 VBD denotes were
T13993 868-877 VBN denotes collected
T13994 878-881 IN denotes for
T13995 882-890 NN denotes analysis
T13996 891-893 IN denotes of
T13997 894-901 CD denotes IL12P70
T13998 902-912 NN denotes production
T13999 912-913 . denotes .
T14000 914-918 NNS denotes Data
T14001 919-922 VBP denotes are
T14002 923-937 NN denotes representative
T14003 938-940 IN denotes of
T14004 941-946 CD denotes three
T14005 947-958 JJ denotes independent
T14006 959-970 NNS denotes experiments
T14007 970-971 . denotes .
T14008 972-973 SYM denotes *
T14009 974-975 NN denotes P
T14010 975-976 NN denotes <
T14011 976-980 CD denotes 0.01
T14012 980-981 : denotes ;
T14013 982-984 SYM denotes **
T14014 985-986 FW denotes P
T14015 986-987 FW denotes <
T14016 987-992 CD denotes 0.005
T14017 992-993 . denotes .
R11498 T13813 T13814 amod Defective,production
R11499 T13814 T13814 ROOT production,production
R11500 T13815 T13814 prep of,production
R11501 T13816 T13817 amod pro-inflammatory,mediators
R11502 T13817 T13815 pobj mediators,of
R11503 T13818 T13814 prep from,production
R11504 T13819 T13820 amod stimulated,cpdm
R11505 T13820 T13821 compound cpdm,BMDC
R11506 T13821 T13818 pobj BMDC,from
R11507 T13822 T13814 punct .,production
R11508 T13823 T13844 punct (,washed
R11509 T13824 T13844 intj A,washed
R11510 T13825 T13844 meta D,washed
R11511 T13826 T13825 punct ),D
R11512 T13827 T13828 compound Cultured,WT
R11513 T13828 T13825 conj WT,D
R11514 T13829 T13828 cc and,WT
R11515 T13830 T13831 compound cpdm,BMDC
R11516 T13831 T13828 conj BMDC,WT
R11517 T13832 T13833 punct (,1
R11518 T13833 T13836 nummod 1,cells
R11519 T13834 T13836 nummod ×,cells
R11520 T13835 T13836 nummod 105,cells
R11521 T13836 T13844 nsubjpass cells,washed
R11522 T13837 T13836 prep in,cells
R11523 T13838 T13841 nummod 0.1,medium
R11524 T13839 T13841 amod ml,medium
R11525 T13840 T13841 amod complete,medium
R11526 T13841 T13837 pobj medium,in
R11527 T13842 T13844 punct ),washed
R11528 T13843 T13844 auxpass were,washed
R11529 T13844 T13844 ROOT washed,washed
R11530 T13845 T13844 cc and,washed
R11531 T13846 T13844 conj stimulated,washed
R11532 T13847 T13846 prep with,stimulated
R11533 T13848 T13847 pobj medium,with
R11534 T13849 T13848 punct ",",medium
R11535 T13850 T13852 nummod 100,LPS
R11536 T13851 T13852 compound ng/ml,LPS
R11537 T13852 T13848 conj LPS,medium
R11538 T13853 T13852 cc or,LPS
R11539 T13854 T13858 nummod 25,poly
R11540 T13855 T13858 nmod µg,poly
R11541 T13856 T13858 nmod /,poly
R11542 T13857 T13858 compound ml,poly
R11543 T13858 T13852 conj poly,LPS
R11544 T13859 T13858 nummod I,poly
R11545 T13860 T13858 punct :,poly
R11546 T13861 T13858 appos C,poly
R11547 T13862 T13852 prep for,LPS
R11548 T13863 T13864 nummod 24,hours
R11549 T13864 T13862 pobj hours,for
R11550 T13865 T13844 punct .,washed
R11551 T13866 T13868 nsubjpass Supernatants,collected
R11552 T13867 T13868 auxpass were,collected
R11553 T13868 T13868 ROOT collected,collected
R11554 T13869 T13868 prep for,collected
R11555 T13870 T13869 pobj ELISA,for
R11556 T13871 T13870 prep of,ELISA
R11557 T13872 T13871 pobj IL12P70,of
R11558 T13873 T13872 punct ",",IL12P70
R11559 T13874 T13872 conj IL6,IL12P70
R11560 T13875 T13874 punct ",",IL6
R11561 T13876 T13874 cc and,IL6
R11562 T13877 T13874 conj GMCSF,IL6
R11563 T13878 T13877 punct ",",GMCSF
R11564 T13879 T13869 cc and,for
R11565 T13880 T13869 conj for,for
R11566 T13881 T13880 pobj quantification,for
R11567 T13882 T13881 prep of,quantification
R11568 T13883 T13884 amod nitric,oxide
R11569 T13884 T13882 pobj oxide,of
R11570 T13885 T13884 punct (,oxide
R11571 T13886 T13880 intj NO,for
R11572 T13887 T13880 punct ),for
R11573 T13888 T13868 punct .,collected
R11574 T13889 T13891 punct (,F
R11575 T13890 T13891 compound E,F
R11576 T13891 T13891 ROOT F,F
R11577 T13892 T13891 punct ),F
R11578 T13893 T13894 compound Gradient,numbers
R11579 T13894 T13918 nsubjpass numbers,used
R11580 T13895 T13896 punct (,1
R11581 T13896 T13918 meta 1,used
R11582 T13897 T13898 nummod ×,104
R11583 T13898 T13896 appos 104,1
R11584 T13899 T13902 punct ",",104
R11585 T13900 T13902 nummod 2,104
R11586 T13901 T13902 nummod ×,104
R11587 T13902 T13896 appos 104,1
R11588 T13903 T13896 punct ",",1
R11589 T13904 T13896 cc and,1
R11590 T13905 T13906 nummod 4,×
R11591 T13906 T13918 nsubjpass ×,used
R11592 T13907 T13908 nummod 104,cells
R11593 T13908 T13906 appos cells,×
R11594 T13909 T13908 prep in,cells
R11595 T13910 T13913 nummod 0.1,medium
R11596 T13911 T13913 nmod mL,medium
R11597 T13912 T13913 amod complete,medium
R11598 T13913 T13909 pobj medium,in
R11599 T13914 T13908 punct ),cells
R11600 T13915 T13908 prep of,cells
R11601 T13916 T13915 pobj BMDC,of
R11602 T13917 T13918 auxpass were,used
R11603 T13918 T13918 ROOT used,used
R11604 T13919 T13922 nummod for100,stimulation
R11605 T13920 T13922 compound ng/mL,stimulation
R11606 T13921 T13922 compound LPS,stimulation
R11607 T13922 T13918 dobj stimulation,used
R11608 T13923 T13918 punct .,used
R11609 T13924 T13938 prep After,measured
R11610 T13925 T13926 nummod 24,hours
R11611 T13926 T13924 pobj hours,After
R11612 T13927 T13938 punct ",",measured
R11613 T13928 T13929 det the,amounts
R11614 T13929 T13938 nsubjpass amounts,measured
R11615 T13930 T13929 prep of,amounts
R11616 T13931 T13930 pobj IL12P70,of
R11617 T13932 T13931 cc and,IL12P70
R11618 T13933 T13931 conj IL6,IL12P70
R11619 T13934 T13929 prep from,amounts
R11620 T13935 T13936 det the,supernatant
R11621 T13936 T13934 pobj supernatant,from
R11622 T13937 T13938 auxpass were,measured
R11623 T13938 T13938 ROOT measured,measured
R11624 T13939 T13938 punct .,measured
R11625 T13940 T13941 punct (,G
R11626 T13941 T13941 ROOT G,G
R11627 T13942 T13941 punct ),G
R11628 T13943 T13945 det The,mice
R11629 T13944 T13945 compound cpdm,mice
R11630 T13945 T13950 nsubj mice,had
R11631 T13946 T13945 acl rescued,mice
R11632 T13947 T13946 agent by,rescued
R11633 T13948 T13949 amod Sharpin-containing,BAC
R11634 T13949 T13947 pobj BAC,by
R11635 T13950 T13950 ROOT had,had
R11636 T13951 T13952 amod complete,remission
R11637 T13952 T13950 dobj remission,had
R11638 T13953 T13952 prep of,remission
R11639 T13954 T13957 det the,[
R11640 T13955 T13956 amod inflammatory,phenotype
R11641 T13956 T13957 compound phenotype,[
R11642 T13957 T13953 pobj [,of
R11643 T13958 T13957 nummod 2,[
R11644 T13959 T13957 appos ],[
R11645 T13960 T13950 punct .,had
R11646 T13961 T13962 nsubj BMDC,developed
R11647 T13962 T13962 ROOT developed,developed
R11648 T13963 T13962 prep from,developed
R11649 T13964 T13963 pobj cpdm,from
R11650 T13965 T13962 cc and,developed
R11651 T13966 T13962 conj rescued,developed
R11652 T13967 T13968 compound cpdm,mice
R11653 T13968 T13970 nsubjpass mice,plated
R11654 T13969 T13970 auxpass were,plated
R11655 T13970 T13966 ccomp plated,rescued
R11656 T13971 T13970 punct (,plated
R11657 T13972 T13975 nummod 1,cells
R11658 T13973 T13975 nummod ×,cells
R11659 T13974 T13975 nummod 106,cells
R11660 T13975 T13970 appos cells,plated
R11661 T13976 T13975 prep in,cells
R11662 T13977 T13978 nummod 0.3,mL
R11663 T13978 T13976 pobj mL,in
R11664 T13979 T13975 punct ),cells
R11665 T13980 T13970 cc and,plated
R11666 T13981 T13970 conj stimulated,plated
R11667 T13982 T13981 prep with,stimulated
R11668 T13983 T13985 nummod 100,LPS
R11669 T13984 T13985 compound ng/mL,LPS
R11670 T13985 T13982 pobj LPS,with
R11671 T13986 T13962 punct .,developed
R11672 T13987 T13993 prep After,collected
R11673 T13988 T13989 nummod 24,hours
R11674 T13989 T13987 pobj hours,After
R11675 T13990 T13993 punct ",",collected
R11692 T14007 T14001 punct .,are
R11693 T14008 T14016 ccomp *,0.005
R11694 T14009 T14011 nmod P,0.01
R11695 T14010 T14011 compound <,0.01
R11696 T14011 T14008 npadvmod 0.01,*
R11697 T14012 T14016 punct ;,0.005
R11698 T14013 T14016 punct **,0.005
R11699 T14014 T14015 nmod P,<
R11700 T14015 T14016 nmod <,0.005
R11701 T14016 T14016 ROOT 0.005,0.005
R11702 T14017 T14016 punct .,0.005
R11676 T13991 T13993 nsubjpass supernatants,collected
R11677 T13992 T13993 auxpass were,collected
R11678 T13993 T13993 ROOT collected,collected
R11679 T13994 T13993 prep for,collected
R11680 T13995 T13994 pobj analysis,for
R11681 T13996 T13995 prep of,analysis
R11682 T13997 T13998 compound IL12P70,production
R11683 T13998 T13996 pobj production,of
R11684 T13999 T13993 punct .,collected
R11685 T14000 T14001 nsubj Data,are
R11686 T14001 T14001 ROOT are,are
R11687 T14002 T14001 attr representative,are
R11688 T14003 T14002 prep of,representative
R11689 T14004 T14006 nummod three,experiments
R11690 T14005 T14006 amod independent,experiments
R11691 T14006 T14003 pobj experiments,of

GO-BP

Id Subject Object Predicate Lexical cue
T14210 375-391 http://purl.obolibrary.org/obo/GO_0051410 denotes nitric oxide (NO

GO-CC

Id Subject Object Predicate Lexical cue
T14211 161-166 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14212 442-447 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14213 782-787 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T13806 44-121 Sentence denotes Defective production of pro-inflammatory mediators from stimulated cpdm BMDC.
T13807 122-282 Sentence denotes (A–D) Cultured WT and cpdm BMDC (1×105 cells in 0.1 ml complete medium) were washed and stimulated with medium, 100 ng/ml LPS or 25 µg/ml poly I:C for 24 hours.
T13808 283-522 Sentence denotes Supernatants were collected for ELISA of IL12P70, IL6, and GMCSF, and for quantification of nitric oxide (NO). (E–F) Gradient numbers (1×104, 2×104, and 4×104 cells in 0.1 mL complete medium) of BMDC were used for100 ng/mL LPS stimulation.
T13809 523-715 Sentence denotes After 24 hours, the amounts of IL12P70 and IL6 from the supernatant were measured. (G) The cpdm mice rescued by Sharpin-containing BAC had complete remission of the inflammatory phenotype [2].
T13810 716-833 Sentence denotes BMDC developed from cpdm and rescued cpdm mice were plated (1×106 cells in 0.3 mL) and stimulated with 100 ng/mL LPS.
T13811 834-913 Sentence denotes After 24 hours, supernatants were collected for analysis of IL12P70 production.
T13812 914-993 Sentence denotes Data are representative of three independent experiments. * P<0.01; ** P<0.005.
T77 0-121 Sentence denotes 10.1371/journal.pone.0031809.g003 Figure 3 Defective production of pro-inflammatory mediators from stimulated cpdm BMDC.
T78 122-282 Sentence denotes (A–D) Cultured WT and cpdm BMDC (1×105 cells in 0.1 ml complete medium) were washed and stimulated with medium, 100 ng/ml LPS or 25 µg/ml poly I:C for 24 hours.
T79 283-522 Sentence denotes Supernatants were collected for ELISA of IL12P70, IL6, and GMCSF, and for quantification of nitric oxide (NO). (E–F) Gradient numbers (1×104, 2×104, and 4×104 cells in 0.1 mL complete medium) of BMDC were used for100 ng/mL LPS stimulation.
T80 523-715 Sentence denotes After 24 hours, the amounts of IL12P70 and IL6 from the supernatant were measured. (G) The cpdm mice rescued by Sharpin-containing BAC had complete remission of the inflammatory phenotype [2].
T81 716-833 Sentence denotes BMDC developed from cpdm and rescued cpdm mice were plated (1×106 cells in 0.3 mL) and stimulated with 100 ng/mL LPS.
T82 834-913 Sentence denotes After 24 hours, supernatants were collected for analysis of IL12P70 production.
T83 914-993 Sentence denotes Data are representative of three independent experiments. * P<0.01; ** P<0.005.

events-check-again

Id Subject Object Predicate Lexical cue
T14222 333-336 Protein denotes IL6
T14223 342-347 Protein denotes GMCSF
T14224 566-569 Protein denotes IL6
T14225 635-642 Protein denotes Sharpin

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T14226 324-331 Protein denotes IL12P70
T14227 333-336 Protein denotes IL6
T14228 342-347 Protein denotes GMCSF
T14229 554-561 Protein denotes IL12P70
T14230 566-569 Protein denotes IL6
T14231 635-657 Protein denotes Sharpin-containing BAC
T14232 894-901 Protein denotes IL12P70
T14233 902-912 Gene_expression denotes production
R11889 T14232 T14233 themeOf IL12P70,production

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T13802 333-336 Protein denotes IL6
T13803 342-347 Protein denotes GMCSF
T13804 566-569 Protein denotes IL6
T13805 635-642 Protein denotes Sharpin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14199 333-336 P05231 denotes IL6
T14200 342-347 P04141 denotes GMCSF
T14201 566-569 P05231 denotes IL6
T14202 635-642 Q9H0F6 denotes Sharpin

test2

Id Subject Object Predicate Lexical cue
T13798 333-336 Protein denotes IL6
T13799 342-347 Protein denotes GMCSF
T13800 566-569 Protein denotes IL6
T13801 635-642 Protein denotes Sharpin