PMC:3279418 / 1062-1234 JSONTXT

{"project":"pmc-enju-pas","denotations":[{"id":"T558","span":{"begin":1,"end":2},"obj":"-COMMA-"},{"id":"T559","span":{"begin":3,"end":6},"obj":"CC"},{"id":"T560","span":{"begin":7,"end":11},"obj":"NN"},{"id":"T561","span":{"begin":13,"end":20},"obj":"RB"},{"id":"T562","span":{"begin":20,"end":21},"obj":"-COMMA-"},{"id":"T563","span":{"begin":22,"end":32},"obj":"VB"},{"id":"T564","span":{"begin":33,"end":50},"obj":"JJ"},{"id":"T565","span":{"begin":51,"end":55},"obj":"NN"},{"id":"T566","span":{"begin":56,"end":59},"obj":"VB"},{"id":"T567","span":{"begin":60,"end":67},"obj":"VB"},{"id":"T568","span":{"begin":68,"end":81},"obj":"NN"},{"id":"T569","span":{"begin":82,"end":85},"obj":"CC"},{"id":"T570","span":{"begin":86,"end":95},"obj":"NN"},{"id":"T571","span":{"begin":96,"end":98},"obj":"IN"},{"id":"T572","span":{"begin":99,"end":115},"obj":"JJ"},{"id":"T573","span":{"begin":116,"end":125},"obj":"NN"},{"id":"T574","span":{"begin":126,"end":129},"obj":"NN"},{"id":"T575","span":{"begin":129,"end":130},"obj":"-COMMA-"},{"id":"T576","span":{"begin":131,"end":138},"obj":"NN"},{"id":"T577","span":{"begin":138,"end":139},"obj":"-COMMA-"},{"id":"T578","span":{"begin":140,"end":145},"obj":"NN"},{"id":"T579","span":{"begin":145,"end":146},"obj":"-COMMA-"},{"id":"T580","span":{"begin":147,"end":150},"obj":"CC"},{"id":"T581","span":{"begin":151,"end":157},"obj":"JJ"},{"id":"T582","span":{"begin":158,"end":163},"obj":"NN"},{"id":"T583","span":{"begin":165,"end":171},"obj":"JJ"}],"relations":[{"id":"R477","pred":"arg1Of","subj":"T559","obj":"T558"},{"id":"R478","pred":"arg2Of","subj":"T560","obj":"T559"},{"id":"R479","pred":"arg1Of","subj":"T565","obj":"T563"},{"id":"R480","pred":"arg1Of","subj":"T565","obj":"T564"},{"id":"R481","pred":"arg1Of","subj":"T565","obj":"T566"},{"id":"R482","pred":"arg1Of","subj":"T565","obj":"T567"},{"id":"R483","pred":"arg1Of","subj":"T567","obj":"T561"},{"id":"R484","pred":"arg1Of","subj":"T567","obj":"T562"},{"id":"R485","pred":"arg2Of","subj":"T567","obj":"T566"},{"id":"R486","pred":"arg1Of","subj":"T568","obj":"T569"},{"id":"R487","pred":"arg2Of","subj":"T569","obj":"T567"},{"id":"R488","pred":"arg1Of","subj":"T569","obj":"T571"},{"id":"R489","pred":"arg2Of","subj":"T570","obj":"T569"},{"id":"R490","pred":"arg1Of","subj":"T573","obj":"T572"},{"id":"R491","pred":"arg1Of","subj":"T574","obj":"T575"},{"id":"R492","pred":"arg1Of","subj":"T575","obj":"T577"},{"id":"R493","pred":"arg2Of","subj":"T576","obj":"T575"},{"id":"R494","pred":"arg1Of","subj":"T577","obj":"T580"},{"id":"R495","pred":"arg2Of","subj":"T578","obj":"T577"},{"id":"R496","pred":"arg2Of","subj":"T580","obj":"T571"},{"id":"R497","pred":"arg1Of","subj":"T580","obj":"T573"},{"id":"R498","pred":"arg1Of","subj":"T580","obj":"T579"},{"id":"R499","pred":"arg2Of","subj":"T582","obj":"T580"},{"id":"R500","pred":"arg1Of","subj":"T582","obj":"T581"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T282","span":{"begin":1,"end":2},"obj":","},{"id":"T283","span":{"begin":3,"end":6},"obj":"CC"},{"id":"T284","span":{"begin":7,"end":11},"obj":"NNP"},{"id":"T285","span":{"begin":11,"end":12},"obj":"."},{"id":"T286","span":{"begin":13,"end":20},"obj":"RB"},{"id":"T287","span":{"begin":20,"end":21},"obj":","},{"id":"T288","span":{"begin":22,"end":32},"obj":"VBD"},{"id":"T289","span":{"begin":33,"end":50},"obj":"JJ"},{"id":"T290","span":{"begin":51,"end":55},"obj":"NNP"},{"id":"T291","span":{"begin":56,"end":59},"obj":"VBD"},{"id":"T292","span":{"begin":60,"end":67},"obj":"VBN"},{"id":"T293","span":{"begin":68,"end":81},"obj":"NN"},{"id":"T294","span":{"begin":82,"end":85},"obj":"CC"},{"id":"T295","span":{"begin":86,"end":95},"obj":"NN"},{"id":"T296","span":{"begin":96,"end":98},"obj":"IN"},{"id":"T297","span":{"begin":99,"end":115},"obj":"JJ"},{"id":"T298","span":{"begin":116,"end":125},"obj":"NNS"},{"id":"T299","span":{"begin":126,"end":129},"obj":"NNP"},{"id":"T300","span":{"begin":129,"end":130},"obj":","},{"id":"T301","span":{"begin":131,"end":138},"obj":"NNP"},{"id":"T302","span":{"begin":138,"end":139},"obj":","},{"id":"T303","span":{"begin":140,"end":145},"obj":"NNP"},{"id":"T304","span":{"begin":145,"end":146},"obj":","},{"id":"T305","span":{"begin":147,"end":150},"obj":"CC"},{"id":"T306","span":{"begin":151,"end":157},"obj":"JJ"},{"id":"T307","span":{"begin":158,"end":163},"obj":"NN"},{"id":"T308","span":{"begin":163,"end":164},"obj":"."},{"id":"T309","span":{"begin":165,"end":171},"obj":"JJ"}],"relations":[{"id":"R202","pred":"advmod","subj":"T286","obj":"T288"},{"id":"R203","pred":"punct","subj":"T287","obj":"T288"},{"id":"R204","pred":"ROOT","subj":"T288","obj":"T288"},{"id":"R205","pred":"compound","subj":"T289","obj":"T290"},{"id":"R206","pred":"nsubj","subj":"T290","obj":"T292"},{"id":"R207","pred":"aux","subj":"T291","obj":"T292"},{"id":"R208","pred":"ccomp","subj":"T292","obj":"T288"},{"id":"R209","pred":"dobj","subj":"T293","obj":"T292"},{"id":"R210","pred":"cc","subj":"T294","obj":"T293"},{"id":"R211","pred":"conj","subj":"T295","obj":"T293"},{"id":"R212","pred":"prep","subj":"T296","obj":"T293"},{"id":"R213","pred":"amod","subj":"T297","obj":"T298"},{"id":"R214","pred":"pobj","subj":"T298","obj":"T296"},{"id":"R215","pred":"dobj","subj":"T299","obj":"T292"},{"id":"R216","pred":"punct","subj":"T300","obj":"T299"},{"id":"R217","pred":"conj","subj":"T301","obj":"T299"},{"id":"R218","pred":"punct","subj":"T302","obj":"T301"},{"id":"R219","pred":"conj","subj":"T303","obj":"T301"},{"id":"R220","pred":"punct","subj":"T304","obj":"T303"},{"id":"R221","pred":"cc","subj":"T305","obj":"T303"},{"id":"R222","pred":"amod","subj":"T306","obj":"T307"},{"id":"R223","pred":"conj","subj":"T307","obj":"T303"},{"id":"R224","pred":"punct","subj":"T308","obj":"T292"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"GO-BP","denotations":[{"id":"T704","span":{"begin":86,"end":95},"obj":"http://purl.obolibrary.org/obo/GO_0046903"},{"id":"T706","span":{"begin":68,"end":81},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"sentences","denotations":[{"id":"T114","span":{"begin":13,"end":164},"obj":"Sentence"},{"id":"T9","span":{"begin":13,"end":164},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"events-check-again","denotations":[{"id":"T814","span":{"begin":7,"end":11},"obj":"Protein"},{"id":"T815","span":{"begin":33,"end":40},"obj":"Protein"},{"id":"T816","span":{"begin":41,"end":50},"obj":"Negative_regulation"},{"id":"T817","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T818","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T819","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T820","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T821","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T822","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T823","span":{"begin":86,"end":95},"obj":"Gene_expression"},{"id":"T824","span":{"begin":86,"end":95},"obj":"Gene_expression"},{"id":"T825","span":{"begin":126,"end":129},"obj":"Protein"},{"id":"T826","span":{"begin":140,"end":145},"obj":"Protein"}],"relations":[{"id":"R711","pred":"themeOf","subj":"T826","obj":"T822"},{"id":"R712","pred":"themeOf","subj":"T826","obj":"T823"},{"id":"R700","pred":"themeOf","subj":"T815","obj":"T816"},{"id":"R701","pred":"causeOf","subj":"T816","obj":"T818"},{"id":"R702","pred":"causeOf","subj":"T816","obj":"T820"},{"id":"R703","pred":"causeOf","subj":"T816","obj":"T819"},{"id":"R704","pred":"causeOf","subj":"T816","obj":"T817"},{"id":"R705","pred":"themeOf","subj":"T821","obj":"T818"},{"id":"R706","pred":"themeOf","subj":"T822","obj":"T820"},{"id":"R707","pred":"themeOf","subj":"T823","obj":"T817"},{"id":"R708","pred":"themeOf","subj":"T824","obj":"T819"},{"id":"R709","pred":"themeOf","subj":"T825","obj":"T821"},{"id":"R710","pred":"themeOf","subj":"T825","obj":"T824"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T867","span":{"begin":7,"end":11},"obj":"Protein"},{"id":"T874","span":{"begin":33,"end":40},"obj":"Protein"},{"id":"T875","span":{"begin":126,"end":129},"obj":"Protein"},{"id":"T876","span":{"begin":131,"end":138},"obj":"Protein"},{"id":"T877","span":{"begin":140,"end":145},"obj":"Protein"},{"id":"T878","span":{"begin":41,"end":50},"obj":"Negative_regulation"},{"id":"T879","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T880","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T881","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T882","span":{"begin":86,"end":95},"obj":"Localization"},{"id":"T883","span":{"begin":86,"end":95},"obj":"Localization"},{"id":"T884","span":{"begin":86,"end":95},"obj":"Localization"},{"id":"T885","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T886","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T887","span":{"begin":60,"end":67},"obj":"Negative_regulation"}],"relations":[{"id":"R650","pred":"themeOf","subj":"T874","obj":"T878"},{"id":"R651","pred":"themeOf","subj":"T875","obj":"T879"},{"id":"R652","pred":"themeOf","subj":"T875","obj":"T882"},{"id":"R653","pred":"themeOf","subj":"T876","obj":"T880"},{"id":"R654","pred":"themeOf","subj":"T876","obj":"T883"},{"id":"R655","pred":"themeOf","subj":"T877","obj":"T881"},{"id":"R656","pred":"themeOf","subj":"T877","obj":"T884"},{"id":"R657","pred":"themeOf","subj":"T879","obj":"T885"},{"id":"R658","pred":"themeOf","subj":"T880","obj":"T886"},{"id":"R659","pred":"themeOf","subj":"T881","obj":"T887"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T93","span":{"begin":86,"end":95},"obj":"Gene_expression"},{"id":"T94","span":{"begin":126,"end":129},"obj":"Protein"},{"id":"T95","span":{"begin":140,"end":145},"obj":"Protein"},{"id":"T83","span":{"begin":7,"end":11},"obj":"Protein"},{"id":"T84","span":{"begin":33,"end":40},"obj":"Protein"},{"id":"T85","span":{"begin":41,"end":50},"obj":"Negative_regulation"},{"id":"T86","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T87","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T88","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T89","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T90","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T91","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T92","span":{"begin":86,"end":95},"obj":"Gene_expression"}],"relations":[{"id":"R36","pred":"themeOf","subj":"T94","obj":"T90"},{"id":"R37","pred":"themeOf","subj":"T94","obj":"T93"},{"id":"R38","pred":"themeOf","subj":"T95","obj":"T91"},{"id":"R678","pred":"causeOf","subj":"T85","obj":"T87"},{"id":"R679","pred":"causeOf","subj":"T85","obj":"T89"},{"id":"R680","pred":"causeOf","subj":"T85","obj":"T88"},{"id":"R681","pred":"causeOf","subj":"T85","obj":"T86"},{"id":"R682","pred":"themeOf","subj":"T90","obj":"T87"},{"id":"R683","pred":"themeOf","subj":"T91","obj":"T89"},{"id":"R684","pred":"themeOf","subj":"T92","obj":"T86"},{"id":"R35","pred":"themeOf","subj":"T93","obj":"T88"},{"id":"R677","pred":"themeOf","subj":"T84","obj":"T85"},{"id":"R39","pred":"themeOf","subj":"T95","obj":"T92"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T674","span":{"begin":7,"end":11},"obj":"P42081"},{"id":"T675","span":{"begin":33,"end":40},"obj":"Q9H0F6"},{"id":"T676","span":{"begin":126,"end":129},"obj":"P05231"},{"id":"T677","span":{"begin":140,"end":145},"obj":"P04141"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}

{"project":"test2","denotations":[{"id":"T51","span":{"begin":7,"end":11},"obj":"Protein"},{"id":"T52","span":{"begin":33,"end":40},"obj":"Protein"},{"id":"T53","span":{"begin":41,"end":50},"obj":"Negative_regulation"},{"id":"T54","span":{"begin":60,"end":67},"obj":"Negative_regulation"},{"id":"T55","span":{"begin":68,"end":81},"obj":"Transcription"},{"id":"T56","span":{"begin":126,"end":129},"obj":"Protein"},{"id":"T57","span":{"begin":140,"end":145},"obj":"Protein"}],"relations":[{"id":"R25","pred":"themeOf","subj":"T52","obj":"T53"},{"id":"R26","pred":"causeOf","subj":"T53","obj":"T54"},{"id":"R27","pred":"themeOf","subj":"T55","obj":"T54"},{"id":"R28","pred":"themeOf","subj":"T56","obj":"T55"},{"id":"R29","pred":"themeOf","subj":"T57","obj":"T55"}],"text":"0, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant "}