PMC:3245220 / 3924-4162 JSONTXT

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3353","span":{"begin":116,"end":119},"obj":"Q04206"},{"id":"T3354","span":{"begin":116,"end":119},"obj":"P21579"},{"id":"T3355","span":{"begin":141,"end":145},"obj":"O75582"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T3412","span":{"begin":123,"end":137},"obj":"Phosphorylation"},{"id":"T3467","span":{"begin":116,"end":119},"obj":"Protein"},{"id":"T3468","span":{"begin":141,"end":145},"obj":"Protein"},{"id":"T3484","span":{"begin":100,"end":106},"obj":"Entity"}],"relations":[{"id":"R2943","pred":"themeOf","subj":"T3484","obj":"T3412"},{"id":"R2946","pred":"partOf","subj":"T3484","obj":"T3467"},{"id":"R2959","pred":"causeOf","subj":"T3468","obj":"T3412"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4455","span":{"begin":52,"end":57},"obj":"Protein"},{"id":"T4457","span":{"begin":67,"end":71},"obj":"Protein"},{"id":"T4458","span":{"begin":110,"end":119},"obj":"Protein"},{"id":"T4459","span":{"begin":141,"end":145},"obj":"Protein"},{"id":"T4460","span":{"begin":157,"end":162},"obj":"Protein"},{"id":"T4461","span":{"begin":123,"end":137},"obj":"Phosphorylation"},{"id":"T4462","span":{"begin":149,"end":156},"obj":"Positive_regulation"},{"id":"T4463","span":{"begin":233,"end":238},"obj":"Protein"}],"relations":[{"id":"R3328","pred":"themeOf","subj":"T4460","obj":"T4462"},{"id":"R3372","pred":"themeOf","subj":"T4458","obj":"T4461"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T4306","span":{"begin":100,"end":106},"obj":"Entity"},{"id":"T4307","span":{"begin":116,"end":119},"obj":"Protein"},{"id":"T4308","span":{"begin":123,"end":137},"obj":"Phosphorylation"},{"id":"T4309","span":{"begin":141,"end":145},"obj":"Protein"}],"relations":[{"id":"R3279","pred":"themeOf","subj":"T4306","obj":"T4308"},{"id":"R3280","pred":"partOf","subj":"T4306","obj":"T4307"},{"id":"R3281","pred":"causeOf","subj":"T4309","obj":"T4308"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T2621","span":{"begin":5,"end":9},"obj":"NN"},{"id":"T2622","span":{"begin":10,"end":12},"obj":"IN"},{"id":"T2623","span":{"begin":13,"end":23},"obj":"VB"},{"id":"T2624","span":{"begin":24,"end":39},"obj":"JJ"},{"id":"T2625","span":{"begin":40,"end":48},"obj":"NN"},{"id":"T2626","span":{"begin":49,"end":51},"obj":"IN"},{"id":"T2627","span":{"begin":52,"end":57},"obj":"NN"},{"id":"T2628","span":{"begin":58,"end":59},"obj":"-LRB-"},{"id":"T2629","span":{"begin":59,"end":61},"obj":"CD"},{"id":"T2630","span":{"begin":61,"end":62},"obj":"-RRB-"},{"id":"T2631","span":{"begin":64,"end":66},"obj":"IN"},{"id":"T2632","span":{"begin":67,"end":79},"obj":"JJ"},{"id":"T2633","span":{"begin":80,"end":86},"obj":"JJ"},{"id":"T2634","span":{"begin":87,"end":98},"obj":"NN"},{"id":"T2635","span":{"begin":98,"end":99},"obj":"-COMMA-"},{"id":"T2636","span":{"begin":100,"end":106},"obj":"NN"},{"id":"T2637","span":{"begin":107,"end":109},"obj":"IN"},{"id":"T2638","span":{"begin":110,"end":115},"obj":"NN"},{"id":"T2639","span":{"begin":116,"end":119},"obj":"NN"},{"id":"T2640","span":{"begin":120,"end":122},"obj":"VB"},{"id":"T2641","span":{"begin":123,"end":137},"obj":"VB"},{"id":"T2642","span":{"begin":138,"end":140},"obj":"IN"},{"id":"T2643","span":{"begin":141,"end":145},"obj":"NN"},{"id":"T2644","span":{"begin":146,"end":148},"obj":"TO"},{"id":"T2645","span":{"begin":149,"end":156},"obj":"VB"},{"id":"T2646","span":{"begin":157,"end":162},"obj":"NN"},{"id":"T2647","span":{"begin":163,"end":178},"obj":"JJ"},{"id":"T2648","span":{"begin":179,"end":187},"obj":"NN"},{"id":"T2649","span":{"begin":188,"end":189},"obj":"-LRB-"},{"id":"T2650","span":{"begin":189,"end":191},"obj":"CD"},{"id":"T2651","span":{"begin":191,"end":192},"obj":"-RRB-"},{"id":"T2652","span":{"begin":194,"end":196},"obj":"IN"},{"id":"T2653","span":{"begin":197,"end":208},"obj":"NN"},{"id":"T2654","span":{"begin":209,"end":216},"obj":"VB"},{"id":"T2655","span":{"begin":217,"end":221},"obj":"IN"},{"id":"T2656","span":{"begin":222,"end":231},"obj":"NN"},{"id":"T2657","span":{"begin":231,"end":232},"obj":"-COMMA-"},{"id":"T2658","span":{"begin":233,"end":238},"obj":"NN"}],"relations":[{"id":"R2211","pred":"arg2Of","subj":"T2623","obj":"T2622"},{"id":"R2212","pred":"arg1Of","subj":"T2623","obj":"T2628"},{"id":"R2214","pred":"arg2Of","subj":"T2625","obj":"T2623"},{"id":"R2215","pred":"arg1Of","subj":"T2625","obj":"T2624"},{"id":"R2216","pred":"arg1Of","subj":"T2625","obj":"T2626"},{"id":"R2217","pred":"arg2Of","subj":"T2627","obj":"T2626"},{"id":"R2218","pred":"arg2Of","subj":"T2629","obj":"T2628"},{"id":"R2219","pred":"arg3Of","subj":"T2630","obj":"T2628"},{"id":"R2224","pred":"arg2Of","subj":"T2634","obj":"T2631"},{"id":"R2225","pred":"arg1Of","subj":"T2634","obj":"T2632"},{"id":"R2226","pred":"arg1Of","subj":"T2634","obj":"T2633"},{"id":"R2228","pred":"arg1Of","subj":"T2636","obj":"T2637"},{"id":"R2229","pred":"arg1Of","subj":"T2636","obj":"T2640"},{"id":"R2230","pred":"arg2Of","subj":"T2636","obj":"T2641"},{"id":"R2232","pred":"arg2Of","subj":"T2639","obj":"T2637"},{"id":"R2233","pred":"arg1Of","subj":"T2639","obj":"T2638"},{"id":"R2234","pred":"arg1Of","subj":"T2641","obj":"T2631"},{"id":"R2235","pred":"arg1Of","subj":"T2641","obj":"T2635"},{"id":"R2236","pred":"arg2Of","subj":"T2641","obj":"T2640"},{"id":"R2237","pred":"modOf","subj":"T2641","obj":"T2644"},{"id":"R2238","pred":"arg1Of","subj":"T2643","obj":"T2641"},{"id":"R2239","pred":"arg2Of","subj":"T2643","obj":"T2642"},{"id":"R2240","pred":"arg1Of","subj":"T2645","obj":"T2644"},{"id":"R2242","pred":"arg2Of","subj":"T2648","obj":"T2645"},{"id":"R2243","pred":"arg1Of","subj":"T2648","obj":"T2646"},{"id":"R2244","pred":"arg1Of","subj":"T2648","obj":"T2647"},{"id":"R2245","pred":"arg1Of","subj":"T2648","obj":"T2649"},{"id":"R2247","pred":"arg2Of","subj":"T2650","obj":"T2649"},{"id":"R2248","pred":"arg3Of","subj":"T2651","obj":"T2649"},{"id":"R2251","pred":"arg2Of","subj":"T2653","obj":"T2652"},{"id":"R2252","pred":"arg2Of","subj":"T2653","obj":"T2654"},{"id":"R2253","pred":"arg1Of","subj":"T2654","obj":"T2655"},{"id":"R2254","pred":"arg2Of","subj":"T2656","obj":"T2655"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    sentences

    {"project":"sentences","denotations":[{"id":"T989","span":{"begin":64,"end":193},"obj":"Sentence"},{"id":"T32","span":{"begin":64,"end":193},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    2_test

    {"project":"2_test","denotations":[{"id":"22216091-15122352-90609688","span":{"begin":59,"end":61},"obj":"15122352"},{"id":"22216091-12628924-90609689","span":{"begin":189,"end":191},"obj":"12628924"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1472","span":{"begin":5,"end":9},"obj":"NN"},{"id":"T1473","span":{"begin":10,"end":12},"obj":"IN"},{"id":"T1474","span":{"begin":13,"end":23},"obj":"VBG"},{"id":"T1475","span":{"begin":24,"end":39},"obj":"JJ"},{"id":"T1476","span":{"begin":40,"end":48},"obj":"NN"},{"id":"T1477","span":{"begin":49,"end":51},"obj":"IN"},{"id":"T1478","span":{"begin":52,"end":57},"obj":"NNP"},{"id":"T1479","span":{"begin":58,"end":59},"obj":"NNP"},{"id":"T1480","span":{"begin":59,"end":61},"obj":"CD"},{"id":"T1481","span":{"begin":61,"end":62},"obj":"NNP"},{"id":"T1482","span":{"begin":62,"end":63},"obj":"."},{"id":"T1483","span":{"begin":64,"end":66},"obj":"IN"},{"id":"T1484","span":{"begin":67,"end":79},"obj":"JJ"},{"id":"T1485","span":{"begin":80,"end":86},"obj":"NN"},{"id":"T1486","span":{"begin":87,"end":98},"obj":"NNS"},{"id":"T1487","span":{"begin":98,"end":99},"obj":","},{"id":"T1488","span":{"begin":100,"end":106},"obj":"NNP"},{"id":"T1489","span":{"begin":107,"end":109},"obj":"IN"},{"id":"T1490","span":{"begin":110,"end":115},"obj":"NNP"},{"id":"T1491","span":{"begin":116,"end":119},"obj":"CD"},{"id":"T1492","span":{"begin":120,"end":122},"obj":"VBZ"},{"id":"T1493","span":{"begin":123,"end":137},"obj":"VBN"},{"id":"T1494","span":{"begin":138,"end":140},"obj":"IN"},{"id":"T1495","span":{"begin":141,"end":145},"obj":"CD"},{"id":"T1496","span":{"begin":146,"end":148},"obj":"TO"},{"id":"T1497","span":{"begin":149,"end":156},"obj":"VB"},{"id":"T1498","span":{"begin":157,"end":162},"obj":"JJ"},{"id":"T1499","span":{"begin":163,"end":178},"obj":"JJ"},{"id":"T1500","span":{"begin":179,"end":187},"obj":"NN"},{"id":"T1501","span":{"begin":188,"end":189},"obj":"NNP"},{"id":"T1502","span":{"begin":189,"end":191},"obj":"CD"},{"id":"T1503","span":{"begin":191,"end":192},"obj":"NNP"},{"id":"T1504","span":{"begin":192,"end":193},"obj":"."},{"id":"T1505","span":{"begin":194,"end":196},"obj":"IN"},{"id":"T1506","span":{"begin":197,"end":208},"obj":"NNS"},{"id":"T1507","span":{"begin":209,"end":216},"obj":"VBN"},{"id":"T1508","span":{"begin":217,"end":221},"obj":"IN"},{"id":"T1509","span":{"begin":222,"end":231},"obj":"NN"},{"id":"T1510","span":{"begin":231,"end":232},"obj":","},{"id":"T1511","span":{"begin":233,"end":238},"obj":"JJ"}],"relations":[{"id":"R1101","pred":"prep","subj":"T1473","obj":"T1472"},{"id":"R1102","pred":"pcomp","subj":"T1474","obj":"T1473"},{"id":"R1103","pred":"amod","subj":"T1475","obj":"T1476"},{"id":"R1104","pred":"dobj","subj":"T1476","obj":"T1474"},{"id":"R1105","pred":"prep","subj":"T1477","obj":"T1476"},{"id":"R1106","pred":"compound","subj":"T1478","obj":"T1479"},{"id":"R1107","pred":"pobj","subj":"T1479","obj":"T1477"},{"id":"R1108","pred":"nummod","subj":"T1480","obj":"T1481"},{"id":"R1109","pred":"dobj","subj":"T1481","obj":"T1474"},{"id":"R1111","pred":"prep","subj":"T1483","obj":"T1493"},{"id":"R1112","pred":"amod","subj":"T1484","obj":"T1486"},{"id":"R1113","pred":"compound","subj":"T1485","obj":"T1486"},{"id":"R1114","pred":"pobj","subj":"T1486","obj":"T1483"},{"id":"R1115","pred":"punct","subj":"T1487","obj":"T1493"},{"id":"R1116","pred":"nsubjpass","subj":"T1488","obj":"T1493"},{"id":"R1117","pred":"prep","subj":"T1489","obj":"T1488"},{"id":"R1118","pred":"pobj","subj":"T1490","obj":"T1489"},{"id":"R1119","pred":"nummod","subj":"T1491","obj":"T1490"},{"id":"R1120","pred":"auxpass","subj":"T1492","obj":"T1493"},{"id":"R1121","pred":"ROOT","subj":"T1493","obj":"T1493"},{"id":"R1122","pred":"agent","subj":"T1494","obj":"T1493"},{"id":"R1123","pred":"pobj","subj":"T1495","obj":"T1494"},{"id":"R1124","pred":"aux","subj":"T1496","obj":"T1497"},{"id":"R1125","pred":"advcl","subj":"T1497","obj":"T1493"},{"id":"R1126","pred":"amod","subj":"T1498","obj":"T1500"},{"id":"R1127","pred":"amod","subj":"T1499","obj":"T1500"},{"id":"R1128","pred":"dobj","subj":"T1500","obj":"T1497"},{"id":"R1129","pred":"nmod","subj":"T1501","obj":"T1503"},{"id":"R1130","pred":"nummod","subj":"T1502","obj":"T1503"},{"id":"R1131","pred":"appos","subj":"T1503","obj":"T1500"},{"id":"R1132","pred":"punct","subj":"T1504","obj":"T1493"},{"id":"R1134","pred":"pobj","subj":"T1506","obj":"T1505"},{"id":"R1135","pred":"acl","subj":"T1507","obj":"T1506"},{"id":"R1136","pred":"prep","subj":"T1508","obj":"T1507"},{"id":"R1137","pred":"pobj","subj":"T1509","obj":"T1508"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}

    test2

    {"project":"test2","denotations":[{"id":"T951","span":{"begin":100,"end":106},"obj":"Entity"},{"id":"T952","span":{"begin":116,"end":119},"obj":"Protein"},{"id":"T953","span":{"begin":123,"end":137},"obj":"Phosphorylation"},{"id":"T954","span":{"begin":141,"end":145},"obj":"Protein"}],"relations":[{"id":"R639","pred":"themeOf","subj":"T951","obj":"T953"},{"id":"R640","pred":"partOf","subj":"T951","obj":"T952"},{"id":"R641","pred":"causeOf","subj":"T954","obj":"T953"}],"text":"tant role in regulating transcriptional activity of NF-κB [17]. In TNFα-treated murine fibroblasts, Ser276 of NF-κB p65 is phosphorylated by MSK1 to enhance NF-κB transcriptional activity [18]. In macrophages treated with endotoxin, NF-κB"}