PMC:3218875 / 9551-9672
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3218875","sourcedb":"PMC","sourceid":"3218875","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3218875","text":"deubiquitinating enzymes that control NF-κB activation by targeting specific signalling proteins including RIP1 and TRAF6","tracks":[{"project":"testone","denotations":[{"id":"T19291","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T19290","span":{"begin":107,"end":111},"obj":"Protein"}],"attributes":[{"subj":"T19291","pred":"source","obj":"testone"},{"subj":"T19290","pred":"source","obj":"testone"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T20374","span":{"begin":116,"end":121},"obj":"NNP"},{"id":"T20373","span":{"begin":112,"end":115},"obj":"CC"},{"id":"T20372","span":{"begin":107,"end":111},"obj":"NNP"},{"id":"T20371","span":{"begin":97,"end":106},"obj":"VBG"},{"id":"T20370","span":{"begin":88,"end":96},"obj":"NNS"},{"id":"T20369","span":{"begin":77,"end":87},"obj":"VBG"},{"id":"T20368","span":{"begin":68,"end":76},"obj":"JJ"},{"id":"T20367","span":{"begin":58,"end":67},"obj":"VBG"},{"id":"T20366","span":{"begin":55,"end":57},"obj":"IN"},{"id":"T20365","span":{"begin":44,"end":54},"obj":"NN"},{"id":"T20364","span":{"begin":38,"end":43},"obj":"JJ"},{"id":"T20363","span":{"begin":30,"end":37},"obj":"VBP"},{"id":"T20362","span":{"begin":25,"end":29},"obj":"WDT"},{"id":"T20361","span":{"begin":17,"end":24},"obj":"NNS"},{"id":"T20360","span":{"begin":0,"end":16},"obj":"VBG"}],"relations":[{"id":"R13476","pred":"ROOT","subj":"T20360","obj":"T20360"},{"id":"R13477","pred":"dobj","subj":"T20361","obj":"T20360"},{"id":"R13478","pred":"nsubj","subj":"T20362","obj":"T20363"},{"id":"R13479","pred":"relcl","subj":"T20363","obj":"T20361"},{"id":"R13480","pred":"amod","subj":"T20364","obj":"T20365"},{"id":"R13481","pred":"dobj","subj":"T20365","obj":"T20363"},{"id":"R13482","pred":"prep","subj":"T20366","obj":"T20363"},{"id":"R13483","pred":"pcomp","subj":"T20367","obj":"T20366"},{"id":"R13484","pred":"amod","subj":"T20368","obj":"T20370"},{"id":"R13485","pred":"amod","subj":"T20369","obj":"T20370"},{"id":"R13486","pred":"dobj","subj":"T20370","obj":"T20367"},{"id":"R13487","pred":"prep","subj":"T20371","obj":"T20370"},{"id":"R13488","pred":"pobj","subj":"T20372","obj":"T20371"},{"id":"R13489","pred":"cc","subj":"T20373","obj":"T20372"},{"id":"R13490","pred":"conj","subj":"T20374","obj":"T20372"}],"attributes":[{"subj":"T20374","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20373","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20372","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20371","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20370","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20369","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20368","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20367","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20366","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20365","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20364","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20363","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20362","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20361","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T20360","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"DLUT931","denotations":[{"id":"T20691","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T20690","span":{"begin":107,"end":111},"obj":"Protein"}],"attributes":[{"subj":"T20691","pred":"source","obj":"DLUT931"},{"subj":"T20690","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T20573","span":{"begin":116,"end":121},"obj":"http://www.uniprot.org/uniprot/Q9Y4K3"},{"id":"T20569","span":{"begin":107,"end":111},"obj":"http://www.uniprot.org/uniprot/Q13546"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T20573","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T20569","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T19615","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T19614","span":{"begin":107,"end":111},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T19615","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T19614","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T19829","span":{"begin":116,"end":121},"obj":"NN"},{"id":"T19828","span":{"begin":112,"end":115},"obj":"CC"},{"id":"T19827","span":{"begin":107,"end":111},"obj":"NN"},{"id":"T19826","span":{"begin":97,"end":106},"obj":"VB"},{"id":"T19825","span":{"begin":88,"end":96},"obj":"NN"},{"id":"T19824","span":{"begin":77,"end":87},"obj":"NN"},{"id":"T19823","span":{"begin":68,"end":76},"obj":"JJ"},{"id":"T19822","span":{"begin":58,"end":67},"obj":"VB"},{"id":"T19821","span":{"begin":55,"end":57},"obj":"IN"},{"id":"T19820","span":{"begin":44,"end":54},"obj":"NN"},{"id":"T19819","span":{"begin":38,"end":43},"obj":"NN"},{"id":"T19818","span":{"begin":30,"end":37},"obj":"VB"},{"id":"T19817","span":{"begin":25,"end":29},"obj":"WDT"},{"id":"T19816","span":{"begin":17,"end":24},"obj":"NN"},{"id":"T19815","span":{"begin":0,"end":16},"obj":"VB"}],"relations":[{"id":"R13107","pred":"arg2Of","subj":"T19816","obj":"T19815"},{"id":"R13108","pred":"arg1Of","subj":"T19816","obj":"T19817"},{"id":"R13109","pred":"arg1Of","subj":"T19816","obj":"T19818"},{"id":"R13110","pred":"arg1Of","subj":"T19816","obj":"T19822"},{"id":"R13111","pred":"arg1Of","subj":"T19818","obj":"T19821"},{"id":"R13112","pred":"arg2Of","subj":"T19820","obj":"T19818"},{"id":"R13113","pred":"arg1Of","subj":"T19820","obj":"T19819"},{"id":"R13114","pred":"arg2Of","subj":"T19822","obj":"T19821"},{"id":"R13115","pred":"arg2Of","subj":"T19825","obj":"T19822"},{"id":"R13116","pred":"arg1Of","subj":"T19825","obj":"T19823"},{"id":"R13117","pred":"arg1Of","subj":"T19825","obj":"T19824"},{"id":"R13118","pred":"arg1Of","subj":"T19825","obj":"T19826"},{"id":"R13119","pred":"arg1Of","subj":"T19827","obj":"T19828"},{"id":"R13120","pred":"arg2Of","subj":"T19828","obj":"T19826"},{"id":"R13124","pred":"arg2Of","subj":"T19829","obj":"T19828"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T19829","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19828","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19827","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19826","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19825","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19824","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19823","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19822","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19821","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19820","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19819","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19818","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19817","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19816","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19815","pred":"source","obj":"pmc-enju-pas"}]},{"project":"GO-BP","denotations":[{"id":"T20026","span":{"begin":0,"end":24},"obj":"http://purl.obolibrary.org/obo/GO_0004843"},{"id":"T20023","span":{"begin":38,"end":54},"obj":"http://purl.obolibrary.org/obo/GO_0051092"},{"id":"T20007","span":{"begin":77,"end":87},"obj":"http://purl.obolibrary.org/obo/GO_0023052"}],"attributes":[{"subj":"T20026","pred":"source","obj":"GO-BP"},{"subj":"T20023","pred":"source","obj":"GO-BP"},{"subj":"T20007","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T20056","span":{"begin":0,"end":24},"obj":"http://purl.obolibrary.org/obo/GO_0004843"}],"attributes":[{"subj":"T20056","pred":"source","obj":"GO-MF"}]},{"project":"simple1","denotations":[{"id":"T20154","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T20153","span":{"begin":107,"end":111},"obj":"Protein"}],"attributes":[{"subj":"T20154","pred":"source","obj":"simple1"},{"subj":"T20153","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T21066","span":{"begin":58,"end":67},"obj":"Binding"},{"id":"T21031","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T21030","span":{"begin":107,"end":111},"obj":"Protein"}],"relations":[{"id":"R13859","pred":"themeOf","subj":"T21030","obj":"T21066"},{"id":"R13860","pred":"themeOf","subj":"T21031","obj":"T21066"}],"attributes":[{"subj":"T21066","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T21031","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T21030","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T20621","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T20620","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T20654","span":{"begin":58,"end":67},"obj":"Binding"}],"relations":[{"id":"R13698","pred":"themeOf","subj":"T20620","obj":"T20654"}],"attributes":[{"subj":"T20621","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T20620","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T20654","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T21179","span":{"begin":25,"end":121},"obj":"Regulation"},{"id":"T21129","span":{"begin":0,"end":121},"obj":"Protein"},{"id":"T21104","span":{"begin":38,"end":54},"obj":"Protein"},{"id":"T21099","span":{"begin":68,"end":96},"obj":"Protein"},{"id":"T21075","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T21073","span":{"begin":107,"end":111},"obj":"Protein"}],"relations":[{"id":"R13889","pred":"themeOf","subj":"T21104","obj":"T21179"}],"attributes":[{"subj":"T21179","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T21129","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T21104","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T21099","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T21075","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T21073","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T20849","span":{"begin":30,"end":37},"obj":"Regulation"},{"id":"T20848","span":{"begin":30,"end":37},"obj":"Regulation"},{"id":"T20847","span":{"begin":44,"end":54},"obj":"Positive_regulation"},{"id":"T20845","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T20844","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T20843","span":{"begin":38,"end":43},"obj":"Protein"}],"relations":[{"id":"R13779","pred":"themeOf","subj":"T20843","obj":"T20847"},{"id":"R13780","pred":"themeOf","subj":"T20847","obj":"T20848"},{"id":"R13781","pred":"themeOf","subj":"T20847","obj":"T20849"}],"attributes":[{"subj":"T20849","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T20848","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T20847","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T20845","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T20844","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T20843","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"test3","denotations":[{"id":"T19428","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T19427","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T19363","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T19362","span":{"begin":107,"end":111},"obj":"Protein"}],"attributes":[{"subj":"T19428","pred":"source","obj":"test3"},{"subj":"T19427","pred":"source","obj":"test3"},{"subj":"T19363","pred":"source","obj":"test3"},{"subj":"T19362","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"testone","color":"#93ecd8","default":true},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ecbe93"},{"id":"DLUT931","color":"#a493ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#9cec93"},{"id":"bionlp-st-ge-2016-test-proteins","color":"#ec93b6"},{"id":"pmc-enju-pas","color":"#93d0ec"},{"id":"GO-BP","color":"#eaec93"},{"id":"GO-MF","color":"#d493ec"},{"id":"simple1","color":"#93ecba"},{"id":"BioNLP16_DUT","color":"#eca093"},{"id":"BioNLP16_Messiy","color":"#93a0ec"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#baec93"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ec93d4"},{"id":"test3","color":"#93ecea"}]}]}}