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PMC:3218875 / 9551-9672 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T19291 116-121 Protein denotes TRAF6
T19290 107-111 Protein denotes RIP1

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20374 116-121 NNP denotes TRAF6
T20373 112-115 CC denotes and
T20372 107-111 NNP denotes RIP1
T20371 97-106 VBG denotes including
T20370 88-96 NNS denotes proteins
T20369 77-87 VBG denotes signalling
T20368 68-76 JJ denotes specific
T20367 58-67 VBG denotes targeting
T20366 55-57 IN denotes by
T20365 44-54 NN denotes activation
T20364 38-43 JJ denotes NF-κB
T20363 30-37 VBP denotes control
T20362 25-29 WDT denotes that
T20361 17-24 NNS denotes enzymes
T20360 0-16 VBG denotes deubiquitinating
R13476 T20360 T20360 ROOT deubiquitinating,deubiquitinating
R13477 T20361 T20360 dobj enzymes,deubiquitinating
R13478 T20362 T20363 nsubj that,control
R13479 T20363 T20361 relcl control,enzymes
R13480 T20364 T20365 amod NF-κB,activation
R13481 T20365 T20363 dobj activation,control
R13482 T20366 T20363 prep by,control
R13483 T20367 T20366 pcomp targeting,by
R13484 T20368 T20370 amod specific,proteins
R13485 T20369 T20370 amod signalling,proteins
R13486 T20370 T20367 dobj proteins,targeting
R13487 T20371 T20370 prep including,proteins
R13488 T20372 T20371 pobj RIP1,including
R13489 T20373 T20372 cc and,RIP1
R13490 T20374 T20372 conj TRAF6,RIP1

DLUT931

Id Subject Object Predicate Lexical cue
T20691 116-121 Protein denotes TRAF6
T20690 107-111 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20573 116-121 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T20569 107-111 http://www.uniprot.org/uniprot/Q13546 denotes RIP1

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19615 116-121 Protein denotes TRAF6
T19614 107-111 Protein denotes RIP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19829 116-121 NN denotes TRAF6
T19828 112-115 CC denotes and
T19827 107-111 NN denotes RIP1
T19826 97-106 VB denotes including
T19825 88-96 NN denotes proteins
T19824 77-87 NN denotes signalling
T19823 68-76 JJ denotes specific
T19822 58-67 VB denotes targeting
T19821 55-57 IN denotes by
T19820 44-54 NN denotes activation
T19819 38-43 NN denotes NF-κB
T19818 30-37 VB denotes control
T19817 25-29 WDT denotes that
T19816 17-24 NN denotes enzymes
T19815 0-16 VB denotes deubiquitinating
R13107 T19816 T19815 arg2Of enzymes,deubiquitinating
R13108 T19816 T19817 arg1Of enzymes,that
R13109 T19816 T19818 arg1Of enzymes,control
R13110 T19816 T19822 arg1Of enzymes,targeting
R13111 T19818 T19821 arg1Of control,by
R13112 T19820 T19818 arg2Of activation,control
R13113 T19820 T19819 arg1Of activation,NF-κB
R13114 T19822 T19821 arg2Of targeting,by
R13115 T19825 T19822 arg2Of proteins,targeting
R13116 T19825 T19823 arg1Of proteins,specific
R13117 T19825 T19824 arg1Of proteins,signalling
R13118 T19825 T19826 arg1Of proteins,including
R13119 T19827 T19828 arg1Of RIP1,and
R13120 T19828 T19826 arg2Of and,including
R13124 T19829 T19828 arg2Of TRAF6,and

GO-BP

Id Subject Object Predicate Lexical cue
T20026 0-24 http://purl.obolibrary.org/obo/GO_0004843 denotes deubiquitinating enzymes
T20023 38-54 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation
T20007 77-87 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling

GO-MF

Id Subject Object Predicate Lexical cue
T20056 0-24 http://purl.obolibrary.org/obo/GO_0004843 denotes deubiquitinating enzymes

simple1

Id Subject Object Predicate Lexical cue
T20154 116-121 Protein denotes TRAF6
T20153 107-111 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T21066 58-67 Binding denotes targeting
T21031 116-121 Protein denotes TRAF6
T21030 107-111 Protein denotes RIP1
R13859 T21030 T21066 themeOf RIP1,targeting
R13860 T21031 T21066 themeOf TRAF6,targeting

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20621 116-121 Protein denotes TRAF6
T20620 107-111 Protein denotes RIP1
T20654 58-67 Binding denotes targeting
R13698 T20620 T20654 themeOf RIP1,targeting

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21179 25-121 Regulation denotes that control NF-κB activation by targeting specific signalling proteins including RIP1 and TRAF6
T21129 0-121 Protein denotes deubiquitinating enzymes that control NF-κB activation by targeting specific signalling proteins including RIP1 and TRAF6
T21104 38-54 Protein denotes NF-κB activation
T21099 68-96 Protein denotes specific signalling proteins
T21075 116-121 Protein denotes TRAF6
T21073 107-111 Protein denotes RIP1
R13889 T21104 T21179 themeOf NF-κB activation,that control NF-κB activation by targeting specific signalling proteins including RIP1 and TRAF6

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20849 30-37 Regulation denotes control
T20848 30-37 Regulation denotes control
T20847 44-54 Positive_regulation denotes activation
T20845 116-121 Protein denotes TRAF6
T20844 107-111 Protein denotes RIP1
T20843 38-43 Protein denotes NF-κB
R13779 T20843 T20847 themeOf NF-κB,activation
R13780 T20847 T20848 themeOf activation,control
R13781 T20847 T20849 themeOf activation,control

test3

Id Subject Object Predicate Lexical cue
T19428 116-121 Protein denotes TRAF6
T19427 107-111 Protein denotes RIP1
T19363 116-121 Protein denotes TRAF6
T19362 107-111 Protein denotes RIP1