PMC:3218875 / 9400-9533 JSONTXT

Annnotations TAB JSON ListView MergeView

    testone

    {"project":"testone","denotations":[{"id":"T19287","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T20355","span":{"begin":132,"end":133},"obj":"."},{"id":"T20354","span":{"begin":127,"end":132},"obj":"NNS"},{"id":"T20353","span":{"begin":121,"end":126},"obj":"JJ"},{"id":"T20352","span":{"begin":116,"end":120},"obj":"IN"},{"id":"T20351","span":{"begin":106,"end":115},"obj":"VBG"},{"id":"T20350","span":{"begin":103,"end":105},"obj":"IN"},{"id":"T20349","span":{"begin":94,"end":102},"obj":"RB"},{"id":"T20348","span":{"begin":89,"end":93},"obj":"JJS"},{"id":"T20347","span":{"begin":87,"end":88},"obj":","},{"id":"T20346","span":{"begin":77,"end":87},"obj":"NN"},{"id":"T20345","span":{"begin":71,"end":76},"obj":"JJ"},{"id":"T20344","span":{"begin":62,"end":70},"obj":"VB"},{"id":"T20343","span":{"begin":51,"end":61},"obj":"RB"},{"id":"T20342","span":{"begin":47,"end":50},"obj":"MD"},{"id":"T20341","span":{"begin":45,"end":46},"obj":","},{"id":"T20340","span":{"begin":37,"end":45},"obj":"NN"},{"id":"T20339","span":{"begin":30,"end":36},"obj":"NN"},{"id":"T20338","span":{"begin":20,"end":29},"obj":"NN"},{"id":"T20337","span":{"begin":17,"end":19},"obj":"DT"},{"id":"T20336","span":{"begin":13,"end":16},"obj":"VBZ"},{"id":"T20335","span":{"begin":7,"end":12},"obj":"WDT"},{"id":"T20334","span":{"begin":5,"end":6},"obj":","},{"id":"T20333","span":{"begin":0,"end":5},"obj":"CD"}],"relations":[{"id":"R13449","pred":"dep","subj":"T20333","obj":"T20344"},{"id":"R13450","pred":"punct","subj":"T20334","obj":"T20333"},{"id":"R13451","pred":"nsubj","subj":"T20335","obj":"T20336"},{"id":"R13452","pred":"relcl","subj":"T20336","obj":"T20333"},{"id":"R13453","pred":"det","subj":"T20337","obj":"T20340"},{"id":"R13454","pred":"compound","subj":"T20338","obj":"T20340"},{"id":"R13455","pred":"compound","subj":"T20339","obj":"T20340"},{"id":"R13456","pred":"dobj","subj":"T20340","obj":"T20336"},{"id":"R13457","pred":"punct","subj":"T20341","obj":"T20344"},{"id":"R13458","pred":"aux","subj":"T20342","obj":"T20344"},{"id":"R13459","pred":"advmod","subj":"T20343","obj":"T20344"},{"id":"R13460","pred":"ROOT","subj":"T20344","obj":"T20344"},{"id":"R13461","pred":"amod","subj":"T20345","obj":"T20346"},{"id":"R13462","pred":"dobj","subj":"T20346","obj":"T20344"},{"id":"R13463","pred":"punct","subj":"T20347","obj":"T20344"},{"id":"R13464","pred":"advmod","subj":"T20348","obj":"T20349"},{"id":"R13465","pred":"advmod","subj":"T20349","obj":"T20350"},{"id":"R13466","pred":"prep","subj":"T20350","obj":"T20344"},{"id":"R13467","pred":"pcomp","subj":"T20351","obj":"T20350"},{"id":"R13468","pred":"prep","subj":"T20352","obj":"T20351"},{"id":"R13469","pred":"amod","subj":"T20353","obj":"T20354"},{"id":"R13470","pred":"pobj","subj":"T20354","obj":"T20352"},{"id":"R13471","pred":"punct","subj":"T20355","obj":"T20344"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T20687","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T19611","span":{"begin":0,"end":5},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T19810","span":{"begin":127,"end":132},"obj":"NN"},{"id":"T19809","span":{"begin":121,"end":126},"obj":"JJ"},{"id":"T19808","span":{"begin":116,"end":120},"obj":"IN"},{"id":"T19807","span":{"begin":106,"end":115},"obj":"VB"},{"id":"T19806","span":{"begin":103,"end":105},"obj":"IN"},{"id":"T19805","span":{"begin":94,"end":102},"obj":"RB"},{"id":"T19804","span":{"begin":89,"end":93},"obj":"RB"},{"id":"T19803","span":{"begin":87,"end":88},"obj":"-COMMA-"},{"id":"T19802","span":{"begin":77,"end":87},"obj":"NN"},{"id":"T19801","span":{"begin":71,"end":76},"obj":"NN"},{"id":"T19800","span":{"begin":62,"end":70},"obj":"VB"},{"id":"T19799","span":{"begin":51,"end":61},"obj":"RB"},{"id":"T19798","span":{"begin":47,"end":50},"obj":"MD"},{"id":"T19797","span":{"begin":45,"end":46},"obj":"-COMMA-"},{"id":"T19796","span":{"begin":37,"end":45},"obj":"NN"},{"id":"T19795","span":{"begin":30,"end":36},"obj":"NN"},{"id":"T19794","span":{"begin":20,"end":29},"obj":"NN"},{"id":"T19793","span":{"begin":17,"end":19},"obj":"DT"},{"id":"T19792","span":{"begin":13,"end":16},"obj":"VB"},{"id":"T19791","span":{"begin":7,"end":12},"obj":"WDT"},{"id":"T19790","span":{"begin":5,"end":6},"obj":"-COMMA-"},{"id":"T19789","span":{"begin":0,"end":5},"obj":"NN"}],"relations":[{"id":"R13079","pred":"arg1Of","subj":"T19789","obj":"T19790"},{"id":"R13080","pred":"arg1Of","subj":"T19789","obj":"T19791"},{"id":"R13081","pred":"arg1Of","subj":"T19789","obj":"T19792"},{"id":"R13082","pred":"arg1Of","subj":"T19789","obj":"T19798"},{"id":"R13083","pred":"arg1Of","subj":"T19789","obj":"T19800"},{"id":"R13084","pred":"arg1Of","subj":"T19789","obj":"T19807"},{"id":"R13085","pred":"arg2Of","subj":"T19796","obj":"T19792"},{"id":"R13086","pred":"arg1Of","subj":"T19796","obj":"T19793"},{"id":"R13087","pred":"arg1Of","subj":"T19796","obj":"T19794"},{"id":"R13088","pred":"arg1Of","subj":"T19796","obj":"T19795"},{"id":"R13089","pred":"arg1Of","subj":"T19800","obj":"T19797"},{"id":"R13090","pred":"arg2Of","subj":"T19800","obj":"T19798"},{"id":"R13091","pred":"arg1Of","subj":"T19800","obj":"T19799"},{"id":"R13092","pred":"arg1Of","subj":"T19800","obj":"T19803"},{"id":"R13093","pred":"arg1Of","subj":"T19800","obj":"T19806"},{"id":"R13094","pred":"arg2Of","subj":"T19802","obj":"T19800"},{"id":"R13095","pred":"arg1Of","subj":"T19802","obj":"T19801"},{"id":"R13096","pred":"arg1Of","subj":"T19805","obj":"T19804"},{"id":"R13097","pred":"arg1Of","subj":"T19806","obj":"T19805"},{"id":"R13098","pred":"arg2Of","subj":"T19807","obj":"T19806"},{"id":"R13099","pred":"arg1Of","subj":"T19807","obj":"T19808"},{"id":"R13100","pred":"arg2Of","subj":"T19810","obj":"T19808"},{"id":"R13101","pred":"arg1Of","subj":"T19810","obj":"T19809"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T20022","span":{"begin":71,"end":87},"obj":"http://purl.obolibrary.org/obo/GO_0051092"},{"id":"T20021","span":{"begin":30,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0016874"},{"id":"T20020","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0034450"},{"id":"T20019","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_1904667"},{"id":"T20018","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0061630"},{"id":"T20017","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_1904668"},{"id":"T20016","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_1990757"},{"id":"T20015","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_1904666"},{"id":"T20014","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0050372"},{"id":"T20013","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0004842"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T20055","span":{"begin":30,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0016874"},{"id":"T20054","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0034450"},{"id":"T20053","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0061630"},{"id":"T20052","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_1990757"},{"id":"T20051","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0050372"},{"id":"T20050","span":{"begin":20,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0004842"},{"id":"T20048","span":{"begin":20,"end":29},"obj":"http://purl.obolibrary.org/obo/GO_0031386"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    sentences

    {"project":"sentences","denotations":[{"id":"T19465","span":{"begin":0,"end":133},"obj":"Sentence"},{"id":"T51","span":{"begin":0,"end":133},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    simple1

    {"project":"simple1","denotations":[{"id":"T20150","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T21027","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T20617","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T21180","span":{"begin":71,"end":88},"obj":"Positive_regulation"},{"id":"T21177","span":{"begin":47,"end":132},"obj":"Regulation"},{"id":"T21146","span":{"begin":17,"end":36},"obj":"Protein"},{"id":"T21106","span":{"begin":71,"end":76},"obj":"Protein"},{"id":"T21095","span":{"begin":116,"end":132},"obj":"Protein"},{"id":"T21093","span":{"begin":20,"end":29},"obj":"Protein"},{"id":"T21086","span":{"begin":0,"end":46},"obj":"Protein"}],"relations":[{"id":"R13890","pred":"themeOf","subj":"T21106","obj":"T21180"},{"id":"R13903","pred":"themeOf","subj":"T21180","obj":"T21177"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T20840","span":{"begin":62,"end":70},"obj":"Regulation"},{"id":"T20839","span":{"begin":106,"end":115},"obj":"Binding"},{"id":"T20838","span":{"begin":77,"end":87},"obj":"Positive_regulation"},{"id":"T20837","span":{"begin":127,"end":132},"obj":"Protein"},{"id":"T20836","span":{"begin":71,"end":76},"obj":"Protein"},{"id":"T20835","span":{"begin":20,"end":36},"obj":"Protein"},{"id":"T20834","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R13773","pred":"themeOf","subj":"T20836","obj":"T20838"},{"id":"R13774","pred":"themeOf","subj":"T20837","obj":"T20839"},{"id":"R13775","pred":"themeOf","subj":"T20838","obj":"T20840"},{"id":"R13776","pred":"causeOf","subj":"T20839","obj":"T20840"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}

    test3

    {"project":"test3","denotations":[{"id":"T19424","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T19359","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"TRAF1, which has no ubiquitin ligase activity, can negatively regulate NF-κB activation, most probably by competing with other TRAFs."}