PMC:3218875 / 3644-3902
Annnotations
testone
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bionlp-st-ge-2016-spacy-parsed
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activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T3390","span":{"begin":6,"end":16},"obj":"Positive_regulation"},{"id":"T3365","span":{"begin":145,"end":149},"obj":"Protein"},{"id":"T3364","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T3363","span":{"begin":20,"end":47},"obj":"Protein"}],"relations":[{"id":"R2683","pred":"themeOf","subj":"T3363","obj":"T3390"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3274","span":{"begin":58,"end":61},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1822","span":{"begin":145,"end":149},"obj":"Protein"},{"id":"T1821","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T1820","span":{"begin":20,"end":47},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
2_test
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pmc-enju-pas
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activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T2503","span":{"begin":156,"end":166},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T2502","span":{"begin":150,"end":166},"obj":"http://purl.obolibrary.org/obo/GO_0038061"},{"id":"T2499","span":{"begin":0,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0051092"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
sentences
{"project":"sentences","denotations":[{"id":"T1758","span":{"begin":0,"end":258},"obj":"Sentence"},{"id":"T23","span":{"begin":0,"end":258},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
simple1
{"project":"simple1","denotations":[{"id":"T2579","span":{"begin":145,"end":149},"obj":"Protein"},{"id":"T2578","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T2577","span":{"begin":20,"end":47},"obj":"Protein"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T3549","span":{"begin":145,"end":149},"obj":"Protein"},{"id":"T3548","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T3547","span":{"begin":20,"end":47},"obj":"Protein"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T3293","span":{"begin":145,"end":149},"obj":"Protein"},{"id":"T3292","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T3291","span":{"begin":20,"end":47},"obj":"Protein"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T3693","span":{"begin":0,"end":85},"obj":"Positive_regulation"},{"id":"T3689","span":{"begin":58,"end":61},"obj":"Protein"},{"id":"T3635","span":{"begin":62,"end":70},"obj":"Protein"},{"id":"T3628","span":{"begin":42,"end":54},"obj":"Protein"},{"id":"T3604","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T3590","span":{"begin":138,"end":166},"obj":"Protein"},{"id":"T3584","span":{"begin":17,"end":38},"obj":"Protein"},{"id":"T3682","span":{"begin":196,"end":208},"obj":"Protein"},{"id":"T3678","span":{"begin":138,"end":166},"obj":"Protein"},{"id":"T3667","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R2747","pred":"causeOf","subj":"T3584","obj":"T3693"},{"id":"R2774","pred":"themeOf","subj":"T3667","obj":"T3693"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T3343","span":{"begin":58,"end":84},"obj":"Protein"},{"id":"T3342","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T3341","span":{"begin":42,"end":47},"obj":"Protein"},{"id":"T3340","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T3346","span":{"begin":6,"end":16},"obj":"Positive_regulation"},{"id":"T3345","span":{"begin":6,"end":16},"obj":"Positive_regulation"},{"id":"T3344","span":{"begin":145,"end":155},"obj":"Protein"}],"relations":[{"id":"R2656","pred":"themeOf","subj":"T3340","obj":"T3345"},{"id":"R2658","pred":"themeOf","subj":"T3343","obj":"T3346"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}
test3
{"project":"test3","denotations":[{"id":"T1715","span":{"begin":145,"end":149},"obj":"Protein"},{"id":"T1714","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T1713","span":{"begin":20,"end":47},"obj":"Protein"},{"id":"T1685","span":{"begin":145,"end":149},"obj":"Protein"},{"id":"T1684","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T1683","span":{"begin":20,"end":47},"obj":"Protein"}],"relations":[{"id":"R1282","pred":"equivalentTo","subj":"T1714","obj":"T1713"},{"id":"R1283","pred":"themeOf","subj":"T1715","obj":"T1714"}],"text":"NF-κB activation by receptor activator of NF-κB (RANK), a TNF receptor family member, is important for osteoclastogenesis, and defects in proper RANK-NF-κB signalling are likely to be involved in RA pathology and other diseases associated with bone loss [7]."}