> top > docs > PMC:3218875 > spans > 32132-32809 > annotations

PMC:3218875 / 32132-32809 JSONTXT

Annnotations TAB JSON ListView MergeView

testone

Id Subject Object Predicate Lexical cue
T17361 570-580 Gene_expression denotes expression
T17360 399-408 Localization denotes secretion
T17359 389-398 Positive_regulation denotes increased
T17358 349-357 Positive_regulation denotes elevated
T17357 209-218 Regulation denotes regulator
T17345 527-534 Protein denotes miR-223
T17344 514-521 Protein denotes miR-132
T17343 506-512 Protein denotes miR-16
T17342 443-447 Protein denotes IL-6
T17341 412-438 Protein denotes matrix metalloproteinase-1
T17340 368-375 Protein denotes miR-203
T17339 236-270 Protein denotes monocyte chemoattractant protein 1
T17338 192-200 Protein denotes miR-124a
T17337 20-27 Protein denotes miR-155
R11383 T17338 T17357 causeOf miR-124a,regulator
R11384 T17339 T17357 themeOf monocyte chemoattractant protein 1,regulator
R11385 T17341 T17360 themeOf matrix metalloproteinase-1,secretion
R11386 T17342 T17360 themeOf IL-6,secretion
R11387 T17343 T17361 themeOf miR-16,expression
R11388 T17344 T17361 themeOf miR-132,expression
R11389 T17345 T17361 themeOf miR-223,expression
R11391 T17360 T17359 themeOf secretion,increased

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T18500 676-677 . denotes .
T18499 675-676 NNP denotes ]
T18498 667-675 CD denotes 83,88,91
T18497 666-667 NNP denotes [
T18496 653-665 NN denotes pathogenesis
T18495 649-652 IN denotes for
T18494 638-648 NNS denotes biomarkers
T18493 627-637 JJ denotes diagnostic
T18492 624-626 IN denotes as
T18491 614-623 JJ denotes potential
T18490 608-613 PRP$ denotes their
T18489 597-607 VBG denotes indicating
T18488 595-596 , denotes ,
T18487 587-595 NNS denotes patients
T18486 584-586 NNP denotes RA
T18485 581-583 IN denotes in
T18484 570-580 NN denotes expression
T18483 562-569 JJ denotes altered
T18482 559-561 DT denotes an
T18481 554-558 VB denotes have
T18480 551-553 TO denotes to
T18479 545-550 VBN denotes shown
T18478 540-544 RB denotes also
T18477 535-539 VBD denotes were
T18476 527-534 JJ denotes miR-223
T18475 523-526 CC denotes and
T18474 521-522 , denotes ,
T18473 514-521 NNP denotes miR-132
T18472 512-513 , denotes ,
T18471 506-512 NNP denotes miR-16
T18470 504-505 , denotes ,
T18469 497-504 RB denotes Finally
T18468 495-496 . denotes .
T18467 494-495 NNP denotes ]
T18466 492-494 CD denotes 90
T18465 491-492 NNP denotes [
T18464 479-490 NNS denotes fibroblasts
T18463 470-478 JJ denotes synovial
T18462 467-469 NNP denotes RA
T18461 464-466 IN denotes in
T18460 455-463 VBN denotes detected
T18459 450-454 VBD denotes were
T18458 448-449 : denotes -
T18457 443-447 NN denotes IL-6
T18456 439-442 CC denotes and
T18455 419-438 NN denotes metalloproteinase-1
T18454 412-418 NN denotes matrix
T18453 409-411 IN denotes of
T18452 399-408 NN denotes secretion
T18451 389-398 VBN denotes increased
T18450 386-388 TO denotes to
T18449 378-385 VBG denotes leading
T18448 376-377 : denotes -
T18447 368-375 NN denotes miR-203
T18446 365-367 IN denotes of
T18445 358-364 NNS denotes levels
T18444 349-357 JJ denotes elevated
T18443 347-348 , denotes ,
T18442 338-347 RB denotes Similarly
T18441 336-337 . denotes .
T18440 335-336 NNP denotes ]
T18439 333-335 CD denotes 89
T18438 332-333 NNP denotes [
T18437 323-331 NNS denotes patients
T18436 320-322 NNP denotes RA
T18435 315-319 IN denotes from
T18434 302-314 NNS denotes synoviocytes
T18433 299-301 IN denotes in
T18432 289-298 VBN denotes decreased
T18431 286-288 VB denotes be
T18430 283-285 TO denotes to
T18429 277-282 VBN denotes shown
T18428 273-276 VBD denotes was
T18427 271-272 : denotes -
T18426 269-270 LS denotes 1
T18425 261-268 NN denotes protein
T18386 20-27 NNP denotes miR-155
T18385 16-19 CC denotes and
T18384 8-15 NNP denotes miR-146
T18383 0-7 IN denotes Besides
T18424 245-260 JJ denotes chemoattractant
T18423 236-244 NN denotes monocyte
T18422 226-235 NN denotes chemokine
T18421 222-225 DT denotes the
T18420 219-221 IN denotes of
T18419 209-218 NN denotes regulator
T18418 205-208 JJ denotes key
T18417 203-204 DT denotes a
T18416 201-202 : denotes -
T18415 192-200 NN denotes miR-124a
T18414 190-191 , denotes ,
T18413 183-190 NN denotes context
T18412 178-182 DT denotes this
T18411 175-177 IN denotes In
T18410 173-174 . denotes .
T18409 163-173 VBN denotes identified
T18408 154-162 RB denotes recently
T18407 149-153 VBD denotes were
T18406 139-148 NN denotes pathology
T18405 136-138 NNP denotes RA
T18404 133-135 IN denotes in
T18403 123-132 NNS denotes responses
T18402 110-122 JJ denotes inflammatory
T18401 94-109 JJ denotes NF-κB-dependent
T18400 91-93 IN denotes of
T18399 83-90 NN denotes control
T18398 79-82 DT denotes the
T18397 76-78 IN denotes in
T18396 71-75 NN denotes role
T18395 61-70 JJ denotes potential
T18394 59-60 DT denotes a
T18393 54-58 IN denotes with
T18392 47-53 NNS denotes miRNAs
T18391 41-46 JJ denotes other
T18390 38-40 IN denotes of
T18389 31-37 NN denotes number
T18388 29-30 DT denotes a
T18387 27-28 , denotes ,
R12239 T18383 T18409 prep Besides,identified
R12240 T18384 T18383 pobj miR-146,Besides
R12241 T18385 T18384 cc and,miR-146
R12242 T18386 T18384 conj miR-155,miR-146
R12243 T18387 T18386 punct ",",miR-155
R12244 T18388 T18389 det a,number
R12245 T18389 T18386 appos number,miR-155
R12246 T18390 T18389 prep of,number
R12247 T18391 T18392 amod other,miRNAs
R12248 T18392 T18390 pobj miRNAs,of
R12249 T18393 T18389 prep with,number
R12250 T18394 T18396 det a,role
R12251 T18395 T18396 amod potential,role
R12252 T18396 T18393 pobj role,with
R12253 T18397 T18396 prep in,role
R12254 T18398 T18399 det the,control
R12255 T18399 T18397 pobj control,in
R12256 T18400 T18399 prep of,control
R12257 T18401 T18403 amod NF-κB-dependent,responses
R12258 T18402 T18403 amod inflammatory,responses
R12259 T18403 T18400 pobj responses,of
R12260 T18404 T18403 prep in,responses
R12261 T18405 T18406 compound RA,pathology
R12262 T18406 T18404 pobj pathology,in
R12263 T18407 T18409 auxpass were,identified
R12264 T18408 T18409 advmod recently,identified
R12265 T18409 T18409 ROOT identified,identified
R12266 T18410 T18409 punct .,identified
R12267 T18411 T18411 ROOT In,In
R12268 T18412 T18413 det this,context
R12269 T18413 T18411 pobj context,In
R12270 T18414 T18411 punct ",",In
R12271 T18415 T18411 conj miR-124a,In
R12272 T18416 T18415 punct -,miR-124a
R12273 T18417 T18419 det a,regulator
R12274 T18418 T18419 amod key,regulator
R12275 T18419 T18415 appos regulator,miR-124a
R12276 T18420 T18419 prep of,regulator
R12277 T18421 T18425 det the,protein
R12278 T18422 T18425 nmod chemokine,protein
R12279 T18423 T18425 nmod monocyte,protein
R12280 T18424 T18425 compound chemoattractant,protein
R12281 T18425 T18420 pobj protein,of
R12282 T18426 T18429 meta 1,shown
R12283 T18427 T18429 punct -,shown
R12284 T18428 T18429 auxpass was,shown
R12285 T18429 T18429 ROOT shown,shown
R12286 T18430 T18432 aux to,decreased
R12287 T18431 T18432 auxpass be,decreased
R12288 T18432 T18429 xcomp decreased,shown
R12289 T18433 T18432 prep in,decreased
R12290 T18434 T18433 pobj synoviocytes,in
R12291 T18435 T18434 prep from,synoviocytes
R12292 T18436 T18437 compound RA,patients
R12293 T18437 T18435 pobj patients,from
R12294 T18438 T18440 nmod [,]
R12295 T18439 T18440 nummod 89,]
R12296 T18440 T18437 appos ],patients
R12297 T18441 T18429 punct .,shown
R12298 T18442 T18460 advmod Similarly,detected
R12299 T18443 T18460 punct ",",detected
R12300 T18444 T18445 amod elevated,levels
R12301 T18445 T18460 nsubjpass levels,detected
R12302 T18446 T18445 prep of,levels
R12303 T18447 T18446 pobj miR-203,of
R12304 T18448 T18449 punct -,leading
R12305 T18449 T18445 acl leading,levels
R12306 T18450 T18449 prep to,leading
R12307 T18451 T18452 amod increased,secretion
R12308 T18452 T18450 pobj secretion,to
R12309 T18453 T18452 prep of,secretion
R12310 T18454 T18455 compound matrix,metalloproteinase-1
R12311 T18455 T18453 pobj metalloproteinase-1,of
R12312 T18456 T18455 cc and,metalloproteinase-1
R12313 T18457 T18455 conj IL-6,metalloproteinase-1
R12314 T18458 T18460 punct -,detected
R12315 T18459 T18460 auxpass were,detected
R12316 T18460 T18460 ROOT detected,detected
R12317 T18461 T18460 prep in,detected
R12318 T18462 T18464 nmod RA,fibroblasts
R12319 T18463 T18464 compound synovial,fibroblasts
R12320 T18464 T18465 compound fibroblasts,[
R12321 T18465 T18461 pobj [,in
R12322 T18466 T18467 nummod 90,]
R12323 T18467 T18465 appos ],[
R12324 T18468 T18460 punct .,detected
R12325 T18469 T18479 advmod Finally,shown
R12326 T18470 T18479 punct ",",shown
R12327 T18471 T18479 nsubjpass miR-16,shown
R12328 T18472 T18471 punct ",",miR-16
R12329 T18473 T18471 conj miR-132,miR-16
R12330 T18474 T18473 punct ",",miR-132
R12331 T18475 T18473 cc and,miR-132
R12332 T18476 T18473 conj miR-223,miR-132
R12333 T18477 T18479 auxpass were,shown
R12334 T18478 T18479 advmod also,shown
R12335 T18479 T18479 ROOT shown,shown
R12336 T18480 T18481 aux to,have
R12337 T18481 T18479 xcomp have,shown
R12338 T18482 T18484 det an,expression
R12339 T18483 T18484 amod altered,expression
R12340 T18484 T18481 dobj expression,have
R12341 T18485 T18484 prep in,expression
R12342 T18486 T18487 compound RA,patients
R12343 T18487 T18485 pobj patients,in
R12344 T18488 T18479 punct ",",shown
R12345 T18489 T18479 advcl indicating,shown
R12346 T18490 T18491 poss their,potential
R12347 T18491 T18489 dobj potential,indicating
R12348 T18492 T18491 prep as,potential
R12349 T18493 T18494 amod diagnostic,biomarkers
R12350 T18494 T18492 pobj biomarkers,as
R12351 T18495 T18494 prep for,biomarkers
R12352 T18496 T18495 pobj pathogenesis,for
R12353 T18497 T18499 compound [,]
R12354 T18498 T18499 compound "83,88,91",]
R12355 T18499 T18491 appos ],potential
R12356 T18500 T18479 punct .,shown

DLUT931

Id Subject Object Predicate Lexical cue
T18593 570-580 Gene_expression denotes expression
T18592 389-398 Positive_regulation denotes increased
T18591 378-385 Positive_regulation denotes leading
T18590 399-408 Localization denotes secretion
T18589 289-298 Negative_regulation denotes decreased
T18588 209-218 Regulation denotes regulator
T18580 527-534 Protein denotes miR-223
T18579 514-521 Protein denotes miR-132
T18578 506-512 Protein denotes miR-16
T18577 443-447 Protein denotes IL-6
T18576 412-438 Protein denotes matrix metalloproteinase-1
T18575 368-375 Protein denotes miR-203
T18574 236-270 Protein denotes monocyte chemoattractant protein 1
T18573 192-200 Protein denotes miR-124a
T18572 20-27 Protein denotes miR-155
R12382 T18573 T18589 themeOf miR-124a,decreased
R12383 T18574 T18588 themeOf monocyte chemoattractant protein 1,regulator
R12384 T18576 T18590 themeOf matrix metalloproteinase-1,secretion
R12385 T18577 T18590 themeOf IL-6,secretion
R12386 T18578 T18593 themeOf miR-16,expression
R12387 T18579 T18593 themeOf miR-132,expression
R12388 T18580 T18593 themeOf miR-223,expression
R12390 T18590 T18591 themeOf secretion,leading
R12391 T18590 T18592 themeOf secretion,increased
R12392 T18590 T18591 themeOf secretion,leading
R12393 T18590 T18592 themeOf secretion,increased

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18508 443-447 http://www.uniprot.org/uniprot/P05231 denotes IL-6

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T17542 527-534 Protein denotes miR-223
T17541 514-521 Protein denotes miR-132
T17540 506-512 Protein denotes miR-16
T17539 443-447 Protein denotes IL-6
T17538 412-438 Protein denotes matrix metalloproteinase-1
T17537 368-375 Protein denotes miR-203
T17536 236-270 Protein denotes monocyte chemoattractant protein 1
T17535 192-200 Protein denotes miR-124a
T17534 20-27 Protein denotes miR-155

2_test

Id Subject Object Predicate Lexical cue
21639951-19404929-4289523 333-335 19404929 denotes 89
21639951-21279994-4289524 492-494 21279994 denotes 90
21639951-18759964-4289525 667-669 18759964 denotes 83
21639951-20470394-4289526 670-672 20470394 denotes 88
21639951-19931339-4289527 673-675 19931339 denotes 91

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17979 675-676 -RRB- denotes ]
T17978 667-675 CD denotes 83,88,91
T17977 666-667 -LRB- denotes [
T17976 653-665 NN denotes pathogenesis
T17975 649-652 IN denotes for
T17974 638-648 NN denotes biomarkers
T17973 627-637 JJ denotes diagnostic
T17972 624-626 IN denotes as
T17971 614-623 NN denotes potential
T17970 608-613 PRP-DOLLAR- denotes their
T17969 597-607 VB denotes indicating
T17968 595-596 -COMMA- denotes ,
T17967 587-595 NN denotes patients
T17966 584-586 NN denotes RA
T17965 581-583 IN denotes in
T17964 570-580 NN denotes expression
T17963 562-569 VB denotes altered
T17962 559-561 DT denotes an
T17961 554-558 VB denotes have
T17960 551-553 TO denotes to
T17959 545-550 VB denotes shown
T17958 540-544 RB denotes also
T17957 535-539 VB denotes were
T17956 527-534 NN denotes miR-223
T17955 523-526 CC denotes and
T17954 521-522 -COMMA- denotes ,
T17953 514-521 NN denotes miR-132
T17952 512-513 -COMMA- denotes ,
T17951 506-512 NN denotes miR-16
T17950 504-505 -COMMA- denotes ,
T17949 497-504 RB denotes Finally
T17948 494-495 -RRB- denotes ]
T17947 492-494 CD denotes 90
T17946 491-492 -LRB- denotes [
T17945 479-490 NN denotes fibroblasts
T17944 470-478 JJ denotes synovial
T17943 467-469 NN denotes RA
T17942 464-466 IN denotes in
T17941 455-463 VB denotes detected
T17940 450-454 VB denotes were
T17939 448-449 -COLON- denotes -
T17938 443-447 NN denotes IL-6
T17937 439-442 CC denotes and
T17936 419-438 NN denotes metalloproteinase-1
T17935 412-418 NN denotes matrix
T17934 409-411 IN denotes of
T17933 399-408 NN denotes secretion
T17932 389-398 VB denotes increased
T17931 386-388 TO denotes to
T17930 378-385 VB denotes leading
T17929 376-377 -COLON- denotes -
T17928 368-375 NN denotes miR-203
T17927 365-367 IN denotes of
T17926 358-364 NN denotes levels
T17925 349-357 JJ denotes elevated
T17924 347-348 -COMMA- denotes ,
T17923 338-347 RB denotes Similarly
T17922 335-336 -RRB- denotes ]
T17921 333-335 CD denotes 89
T17920 332-333 -LRB- denotes [
T17919 323-331 NN denotes patients
T17918 320-322 NN denotes RA
T17917 315-319 IN denotes from
T17916 302-314 NN denotes synoviocytes
T17915 299-301 IN denotes in
T17914 289-298 VB denotes decreased
T17913 286-288 VB denotes be
T17912 283-285 TO denotes to
T17911 277-282 VB denotes shown
T17910 273-276 VB denotes was
T17909 271-272 -COLON- denotes -
T17908 269-270 CD denotes 1
T17907 261-268 NN denotes protein
T17906 245-260 NN denotes chemoattractant
T17905 236-244 NN denotes monocyte
T17904 226-235 NN denotes chemokine
T17903 222-225 DT denotes the
T17902 219-221 IN denotes of
T17901 209-218 NN denotes regulator
T17900 205-208 JJ denotes key
T17899 203-204 DT denotes a
T17898 201-202 -COLON- denotes -
T17897 192-200 NN denotes miR-124a
T17896 190-191 -COMMA- denotes ,
T17895 183-190 NN denotes context
T17894 178-182 DT denotes this
T17893 175-177 IN denotes In
T17892 163-173 VB denotes identified
T17891 154-162 RB denotes recently
T17890 149-153 VB denotes were
T17889 139-148 NN denotes pathology
T17888 136-138 NN denotes RA
T17887 133-135 IN denotes in
T17886 123-132 NN denotes responses
T17885 110-122 JJ denotes inflammatory
T17884 94-109 JJ denotes NF-κB-dependent
T17883 91-93 IN denotes of
T17882 83-90 NN denotes control
T17881 79-82 DT denotes the
T17880 76-78 IN denotes in
T17879 71-75 NN denotes role
T17878 61-70 JJ denotes potential
T17877 59-60 DT denotes a
T17876 54-58 IN denotes with
T17875 47-53 NN denotes miRNAs
T17874 41-46 JJ denotes other
T17873 38-40 IN denotes of
T17872 31-37 NN denotes number
T17871 29-30 DT denotes a
T17870 27-28 -COMMA- denotes ,
T17869 20-27 NN denotes miR-155
T17868 16-19 CC denotes and
T17867 8-15 NN denotes miR-146
T17866 0-7 IN denotes Besides
R11778 T17867 T17868 arg1Of miR-146,and
R11779 T17868 T17866 arg2Of and,Besides
R11780 T17869 T17868 arg2Of miR-155,and
R11781 T17872 T17871 arg1Of number,a
R11782 T17872 T17873 arg1Of number,of
R11783 T17872 T17876 arg1Of number,with
R11784 T17872 T17890 arg1Of number,were
R11785 T17872 T17892 arg2Of number,identified
R11786 T17875 T17873 arg2Of miRNAs,of
R11787 T17875 T17874 arg1Of miRNAs,other
R11788 T17879 T17876 arg2Of role,with
R11789 T17879 T17877 arg1Of role,a
R11790 T17879 T17878 arg1Of role,potential
R11791 T17879 T17880 arg1Of role,in
R11792 T17879 T17887 arg1Of role,in
R11793 T17882 T17880 arg2Of control,in
R11794 T17882 T17881 arg1Of control,the
R11795 T17882 T17883 arg1Of control,of
R11796 T17886 T17883 arg2Of responses,of
R11797 T17886 T17884 arg1Of responses,NF-κB-dependent
R11798 T17886 T17885 arg1Of responses,inflammatory
R11799 T17889 T17887 arg2Of pathology,in
R11800 T17889 T17888 arg1Of pathology,RA
R11801 T17892 T17866 arg1Of identified,Besides
R11802 T17892 T17870 arg1Of identified,","
R11803 T17892 T17890 arg2Of identified,were
R11804 T17892 T17891 arg1Of identified,recently
R11805 T17895 T17893 arg2Of context,In
R11806 T17895 T17894 arg1Of context,this
R11807 T17897 T17898 arg1Of miR-124a,-
R11808 T17897 T17910 arg1Of miR-124a,was
R11809 T17897 T17911 arg2Of miR-124a,shown
R11810 T17897 T17913 arg1Of miR-124a,be
R11811 T17897 T17914 arg2Of miR-124a,decreased
R11812 T17901 T17898 arg2Of regulator,-
R11813 T17901 T17899 arg1Of regulator,a
R11814 T17901 T17900 arg1Of regulator,key
R11815 T17901 T17902 arg1Of regulator,of
R11816 T17907 T17902 arg2Of protein,of
R11817 T17907 T17903 arg1Of protein,the
R11818 T17907 T17904 arg1Of protein,chemokine
R11819 T17907 T17905 arg1Of protein,monocyte
R11820 T17907 T17906 arg1Of protein,chemoattractant
R11821 T17907 T17908 arg1Of protein,1
R11822 T17909 T17898 arg3Of -,-
R11823 T17911 T17893 arg1Of shown,In
R11824 T17911 T17896 arg1Of shown,","
R11825 T17911 T17910 arg2Of shown,was
R11826 T17914 T17911 arg3Of decreased,shown
R11827 T17914 T17912 arg1Of decreased,to
R11828 T17914 T17913 arg2Of decreased,be
R11829 T17914 T17915 arg1Of decreased,in
R11830 T17916 T17915 arg2Of synoviocytes,in
R11831 T17916 T17917 arg1Of synoviocytes,from
R11832 T17919 T17917 arg2Of patients,from
R11833 T17919 T17918 arg1Of patients,RA
R11834 T17919 T17920 arg1Of patients,[
R11835 T17921 T17920 arg2Of 89,[
R11836 T17922 T17920 arg3Of ],[
R11837 T17926 T17925 arg1Of levels,elevated
R11838 T17926 T17927 arg1Of levels,of
R11839 T17926 T17929 arg1Of levels,-
R11840 T17926 T17930 arg1Of levels,leading
R11841 T17926 T17939 arg1Of levels,-
R11842 T17926 T17940 arg1Of levels,were
R11843 T17926 T17941 arg2Of levels,detected
R11844 T17928 T17927 arg2Of miR-203,of
R11845 T17930 T17931 arg1Of leading,to
R11846 T17933 T17931 arg2Of secretion,to
R11847 T17933 T17932 arg2Of secretion,increased
R11848 T17933 T17934 arg1Of secretion,of
R11849 T17936 T17935 arg1Of metalloproteinase-1,matrix
R11850 T17936 T17937 arg1Of metalloproteinase-1,and
R11851 T17937 T17934 arg2Of and,of
R11852 T17938 T17937 arg2Of IL-6,and
R11853 T17941 T17923 arg1Of detected,Similarly
R11854 T17941 T17924 arg1Of detected,","
R11855 T17941 T17940 arg2Of detected,were
R11856 T17941 T17942 arg1Of detected,in
R11857 T17941 T17946 arg1Of detected,[
R11858 T17945 T17942 arg2Of fibroblasts,in
R11859 T17945 T17943 arg1Of fibroblasts,RA
R11860 T17945 T17944 arg1Of fibroblasts,synovial
R11861 T17947 T17946 arg2Of 90,[
R11862 T17948 T17946 arg3Of ],[
R11863 T17951 T17952 arg1Of miR-16,","
R11864 T17952 T17955 arg1Of ",",and
R11865 T17953 T17952 arg2Of miR-132,","
R11866 T17955 T17954 arg1Of and,","
R11867 T17955 T17957 arg1Of and,were
R11868 T17955 T17959 arg2Of and,shown
R11869 T17955 T17961 arg1Of and,have
R11870 T17956 T17955 arg2Of miR-223,and
R11871 T17959 T17949 arg1Of shown,Finally
R11872 T17959 T17950 arg1Of shown,","
R11873 T17959 T17957 arg2Of shown,were
R11874 T17959 T17958 arg1Of shown,also
R11875 T17959 T17968 arg1Of shown,","
R11876 T17959 T17969 modOf shown,indicating
R11877 T17961 T17959 arg3Of have,shown
R11878 T17961 T17960 arg1Of have,to
R11879 T17964 T17961 arg2Of expression,have
R11880 T17964 T17962 arg1Of expression,an
R11881 T17964 T17963 arg2Of expression,altered
R11882 T17964 T17965 arg1Of expression,in
R11883 T17967 T17965 arg2Of patients,in
R11884 T17967 T17966 arg1Of patients,RA
R11885 T17971 T17969 arg2Of potential,indicating
R11886 T17971 T17970 arg1Of potential,their
R11887 T17971 T17972 arg1Of potential,as
R11888 T17974 T17972 arg2Of biomarkers,as
R11889 T17974 T17973 arg1Of biomarkers,diagnostic
R11890 T17974 T17975 arg1Of biomarkers,for
R11891 T17976 T17975 arg2Of pathogenesis,for
R11892 T17976 T17977 arg1Of pathogenesis,[
R11893 T17978 T17977 arg2Of "83,88,91",[
R11894 T17979 T17977 arg3Of ],[

GO-BP

Id Subject Object Predicate Lexical cue
T18003 399-436 http://purl.obolibrary.org/obo/GO_1904465 denotes secretion of matrix metalloproteinase
T18002 399-436 http://purl.obolibrary.org/obo/GO_1990773 denotes secretion of matrix metalloproteinase
T18001 399-436 http://purl.obolibrary.org/obo/GO_1904466 denotes secretion of matrix metalloproteinase
T18000 399-436 http://purl.obolibrary.org/obo/GO_1904464 denotes secretion of matrix metalloproteinase
T17999 399-408 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T17998 653-665 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T17988 110-132 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory responses

GO-MF

Id Subject Object Predicate Lexical cue
T18006 443-447 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T18005 437-445 http://purl.obolibrary.org/obo/GO_0005149 denotes 1 and IL

sentences

Id Subject Object Predicate Lexical cue
T17449 497-677 Sentence denotes Finally, miR-16, miR-132, and miR-223 were also shown to have an altered expression in RA patients, indicating their potential as diagnostic biomarkers for pathogenesis [83,88,91].
T17448 338-496 Sentence denotes Similarly, elevated levels of miR-203 - leading to increased secretion of matrix metalloproteinase-1 and IL-6 - were detected in RA synovial fibroblasts [90].
T17447 175-337 Sentence denotes In this context, miR-124a - a key regulator of the chemokine monocyte chemoattractant protein 1 - was shown to be decreased in synoviocytes from RA patients [89].
T17446 0-174 Sentence denotes Besides miR-146 and miR-155, a number of other miRNAs with a potential role in the control of NF-κB-dependent inflammatory responses in RA pathology were recently identified.
T183 0-174 Sentence denotes Besides miR-146 and miR-155, a number of other miRNAs with a potential role in the control of NF-κB-dependent inflammatory responses in RA pathology were recently identified.
T184 175-337 Sentence denotes In this context, miR-124a - a key regulator of the chemokine monocyte chemoattractant protein 1 - was shown to be decreased in synoviocytes from RA patients [89].
T185 338-496 Sentence denotes Similarly, elevated levels of miR-203 - leading to increased secretion of matrix metalloproteinase-1 and IL-6 - were detected in RA synovial fibroblasts [90].
T186 497-677 Sentence denotes Finally, miR-16, miR-132, and miR-223 were also shown to have an altered expression in RA patients, indicating their potential as diagnostic biomarkers for pathogenesis [83,88,91].

simple1

Id Subject Object Predicate Lexical cue
T18038 527-534 Protein denotes miR-223
T18037 514-521 Protein denotes miR-132
T18036 506-512 Protein denotes miR-16
T18035 443-447 Protein denotes IL-6
T18034 412-438 Protein denotes matrix metalloproteinase-1
T18033 368-375 Protein denotes miR-203
T18032 236-270 Protein denotes monocyte chemoattractant protein 1
T18031 192-200 Protein denotes miR-124a
T18030 20-27 Protein denotes miR-155

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T18771 527-534 Protein denotes miR-223
T18770 514-521 Protein denotes miR-132
T18769 506-512 Protein denotes miR-16
T18768 443-447 Protein denotes IL-6
T18767 412-438 Protein denotes matrix metalloproteinase-1
T18766 368-375 Protein denotes miR-203
T18765 236-270 Protein denotes monocyte chemoattractant protein 1
T18764 192-200 Protein denotes miR-124a
T18763 20-27 Protein denotes miR-155
T18785 570-580 Gene_expression denotes expression
T18784 389-398 Positive_regulation denotes increased
T18783 399-408 Localization denotes secretion
T18782 349-357 Positive_regulation denotes elevated
T18781 289-298 Negative_regulation denotes decreased
R12441 T18764 T18781 themeOf miR-124a,decreased
R12442 T18766 T18782 themeOf miR-203,elevated
R12443 T18767 T18783 themeOf matrix metalloproteinase-1,secretion
R12444 T18768 T18783 themeOf IL-6,secretion
R12445 T18770 T18785 themeOf miR-132,expression
R12449 T18783 T18784 themeOf secretion,increased
R12450 T18783 T18784 themeOf secretion,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T18550 399-408 Localization denotes secretion
T18549 349-357 Positive_regulation denotes elevated
T18548 389-398 Positive_regulation denotes increased
T18547 289-298 Negative_regulation denotes decreased
T18538 527-534 Protein denotes miR-223
T18537 514-521 Protein denotes miR-132
T18536 506-512 Protein denotes miR-16
T18535 443-447 Protein denotes IL-6
T18534 412-438 Protein denotes matrix metalloproteinase-1
T18533 368-375 Protein denotes miR-203
T18532 236-270 Protein denotes monocyte chemoattractant protein 1
T18531 192-200 Protein denotes miR-124a
T18530 20-27 Protein denotes miR-155
R12365 T18531 T18547 themeOf miR-124a,decreased
R12366 T18533 T18549 themeOf miR-203,elevated
R12367 T18534 T18548 themeOf matrix metalloproteinase-1,increased
R12368 T18534 T18550 themeOf matrix metalloproteinase-1,secretion
R12369 T18535 T18548 themeOf IL-6,increased
R12370 T18535 T18550 themeOf IL-6,secretion
R12372 T18550 T18548 themeOf secretion,increased
R12373 T18550 T18548 themeOf secretion,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T18859 386-447 Gene_expression denotes to increased secretion of matrix metalloproteinase-1 and IL-6
T18858 386-447 Gene_expression denotes to increased secretion of matrix metalloproteinase-1 and IL-6
T18855 386-447 Positive_regulation denotes to increased secretion of matrix metalloproteinase-1 and IL-6
T18854 386-447 Positive_regulation denotes to increased secretion of matrix metalloproteinase-1 and IL-6
T18850 443-447 Protein denotes IL-6
T18849 320-322 Protein denotes RA
T18848 226-235 Protein denotes chemokine
T18846 467-469 Protein denotes RA
T18842 8-15 Entity denotes miR-146
T18840 302-314 Entity denotes synoviocytes
T18837 506-512 Protein denotes miR-16
T18823 527-534 Protein denotes miR-223
T18820 192-200 Protein denotes miR-124a
T18819 584-586 Protein denotes RA
T18817 412-438 Protein denotes matrix metalloproteinase-1
T18808 136-148 Protein denotes RA pathology
T18803 514-521 Protein denotes miR-132
T18800 479-495 Entity denotes fibroblasts [90]
T18799 222-270 Protein denotes the chemokine monocyte chemoattractant protein 1
T18798 368-375 Protein denotes miR-203
T18793 94-109 Protein denotes NF-κB-dependent
T18790 20-28 Protein denotes miR-155,
R12453 T18817 T18858 themeOf matrix metalloproteinase-1,to increased secretion of matrix metalloproteinase-1 and IL-6
R12461 T18850 T18859 themeOf IL-6,to increased secretion of matrix metalloproteinase-1 and IL-6
R12462 T18858 T18854 themeOf to increased secretion of matrix metalloproteinase-1 and IL-6,to increased secretion of matrix metalloproteinase-1 and IL-6
R12463 T18859 T18855 themeOf to increased secretion of matrix metalloproteinase-1 and IL-6,to increased secretion of matrix metalloproteinase-1 and IL-6

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T18634 389-398 Positive_regulation denotes increased
T18633 389-398 Positive_regulation denotes increased
T18632 378-385 Positive_regulation denotes leading
T18631 378-385 Positive_regulation denotes leading
T18630 399-408 Localization denotes secretion
T18629 399-408 Localization denotes secretion
T18628 443-447 Protein denotes IL-6
T18627 412-438 Protein denotes matrix metalloproteinase-1
T18626 289-298 Negative_regulation denotes decreased
T18625 226-270 Protein denotes chemokine monocyte chemoattractant protein 1
T18624 192-200 Protein denotes miR-124a
T18623 94-99 Protein denotes NF-κB
R12404 T18624 T18626 themeOf miR-124a,decreased
R12405 T18627 T18629 themeOf matrix metalloproteinase-1,secretion
R12406 T18628 T18630 themeOf IL-6,secretion
R12407 T18629 T18631 themeOf secretion,leading
R12408 T18629 T18633 themeOf secretion,increased
R12409 T18630 T18632 themeOf secretion,leading
R12410 T18630 T18634 themeOf secretion,increased

test3

Id Subject Object Predicate Lexical cue
T17432 570-580 Gene_expression denotes expression
T17431 527-534 Protein denotes miR-223
T17430 514-521 Protein denotes miR-132
T17429 506-512 Protein denotes miR-16
T17428 443-447 Protein denotes IL-6
T17427 412-438 Protein denotes matrix metalloproteinase-1
T17426 399-408 Gene_expression denotes secretion
T17425 389-398 Positive_regulation denotes increased
T17424 368-375 Protein denotes miR-203
T17423 349-357 Positive_regulation denotes elevated
T17422 236-270 Protein denotes monocyte chemoattractant protein 1
T17421 209-218 Regulation denotes regulator
T17420 192-200 Protein denotes miR-124a
T17419 20-27 Protein denotes miR-155
T17391 527-534 Protein denotes miR-223
T17390 514-521 Protein denotes miR-132
T17389 506-512 Protein denotes miR-16
T17388 443-447 Protein denotes IL-6
T17387 412-438 Protein denotes matrix metalloproteinase-1
T17386 368-375 Protein denotes miR-203
T17385 236-270 Protein denotes monocyte chemoattractant protein 1
T17384 192-200 Protein denotes miR-124a
T17383 20-27 Protein denotes miR-155
R11396 T17426 T17425 themeOf secretion,increased
R11397 T17427 T17426 themeOf matrix metalloproteinase-1,secretion
R11398 T17428 T17426 themeOf IL-6,secretion
R11399 T17429 T17432 themeOf miR-16,expression
R11400 T17430 T17432 themeOf miR-132,expression
R11401 T17431 T17432 themeOf miR-223,expression