PMC:3218875 / 25262-26274
Annnotations
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14059 | 735-744 | Gene_expression | denotes | expressed |
| T14042 | 881-885 | Protein | denotes | CYLD |
| T14041 | 723-726 | Protein | denotes | A20 |
| T14040 | 686-690 | Protein | denotes | CYLD |
| T14039 | 671-674 | Protein | denotes | A20 |
| T14038 | 622-625 | Protein | denotes | A20 |
| T14037 | 581-585 | Protein | denotes | TAK1 |
| T14036 | 572-576 | Protein | denotes | RIP1 |
| T14035 | 565-570 | Protein | denotes | TRAF7 |
| T14034 | 558-563 | Protein | denotes | TRAF6 |
| T14033 | 551-556 | Protein | denotes | TRAF2 |
| T14032 | 545-549 | Protein | denotes | NEMO |
| T14031 | 412-416 | Protein | denotes | RANK |
| T14030 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T14029 | 316-320 | Protein | denotes | CYLD |
| T14028 | 123-127 | Protein | denotes | CYLD |
| T14027 | 17-21 | Protein | denotes | CYLD |
| T14026 | 0-15 | Protein | denotes | Cylindromatosis |
| R9294 | T14027 | T14026 | equivalentTo | CYLD,Cylindromatosis |
| R9295 | T14041 | T14059 | themeOf | A20,expressed |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14832 | 871-872 | , | denotes | , |
| T14831 | 861-871 | NN | denotes | signalling |
| T14830 | 855-860 | JJ | denotes | NF-κB |
| T14829 | 852-854 | IN | denotes | of |
| T14828 | 845-851 | NNS | denotes | phases |
| T14827 | 839-844 | RB | denotes | later |
| T14826 | 829-838 | VBZ | denotes | regulates |
| T14825 | 822-828 | RB | denotes | mainly |
| T14824 | 814-821 | NN | denotes | protein |
| T14823 | 809-813 | DT | denotes | this |
| T14822 | 804-808 | IN | denotes | that |
| T14821 | 794-803 | VBN | denotes | suggested |
| T14820 | 789-793 | VBN | denotes | been |
| T14819 | 785-788 | VBZ | denotes | has |
| T14818 | 782-784 | PRP | denotes | it |
| T14817 | 780-781 | , | denotes | , |
| T14816 | 769-780 | NN | denotes | stimulation |
| T14815 | 764-768 | IN | denotes | upon |
| T14814 | 758-763 | NNS | denotes | types |
| T14813 | 753-757 | NN | denotes | cell |
| T14812 | 748-752 | JJ | denotes | many |
| T14811 | 745-747 | IN | denotes | in |
| T14810 | 735-744 | VBN | denotes | expressed |
| T14809 | 730-734 | RB | denotes | only |
| T14808 | 727-729 | VBZ | denotes | is |
| T14807 | 723-726 | NNP | denotes | A20 |
| T14806 | 720-722 | IN | denotes | As |
| T14805 | 718-719 | . | denotes | . |
| T14804 | 708-718 | NN | denotes | activation |
| T14803 | 702-707 | JJ | denotes | NF-κB |
| T14802 | 694-701 | VB | denotes | control |
| T14801 | 691-693 | TO | denotes | to |
| T14800 | 686-690 | NNP | denotes | CYLD |
| T14799 | 683-685 | IN | denotes | as |
| T14798 | 678-682 | RB | denotes | well |
| T14797 | 675-677 | RB | denotes | as |
| T14796 | 671-674 | NNP | denotes | A20 |
| T14795 | 665-670 | VBZ | denotes | needs |
| T14794 | 660-664 | NN | denotes | cell |
| T14793 | 656-659 | DT | denotes | the |
| T14792 | 652-655 | WRB | denotes | why |
| T14791 | 646-651 | JJ | denotes | clear |
| T14790 | 642-645 | RB | denotes | not |
| T14789 | 636-641 | RB | denotes | still |
| T14788 | 633-635 | VBZ | denotes | is |
| T14787 | 630-632 | PRP | denotes | it |
| T14786 | 626-629 | CC | denotes | and |
| T14785 | 622-625 | NNP | denotes | A20 |
| T14784 | 619-621 | IN | denotes | by |
| T14783 | 610-618 | VBN | denotes | targeted |
| T14782 | 605-609 | RB | denotes | also |
| T14781 | 601-604 | VBP | denotes | are |
| T14780 | 595-600 | DT | denotes | these |
| T14779 | 592-594 | IN | denotes | of |
| T14778 | 587-591 | JJ | denotes | Many |
| T14777 | 585-586 | . | denotes | . |
| T14776 | 581-585 | NNP | denotes | TAK1 |
| T14775 | 577-580 | CC | denotes | and |
| T14774 | 572-576 | NNP | denotes | RIP1 |
| T14773 | 570-571 | , | denotes | , |
| T14772 | 565-570 | NNP | denotes | TRAF7 |
| T14771 | 563-564 | , | denotes | , |
| T14770 | 558-563 | NNP | denotes | TRAF6 |
| T14769 | 556-557 | , | denotes | , |
| T14768 | 551-556 | NNP | denotes | TRAF2 |
| T14767 | 549-550 | , | denotes | , |
| T14766 | 545-549 | NNP | denotes | NEMO |
| T14765 | 535-544 | VBG | denotes | including |
| T14764 | 526-534 | NNS | denotes | proteins |
| T14763 | 515-525 | VBG | denotes | signalling |
| T14762 | 509-514 | NN | denotes | NF-κB |
| T14761 | 501-508 | JJ | denotes | several |
| T14760 | 483-500 | JJ | denotes | deubiquitina-ting |
| T14759 | 480-482 | IN | denotes | by |
| T14758 | 478-479 | , | denotes | , |
| T14757 | 477-478 | -RRB- | denotes | ) |
| T14756 | 476-477 | CD | denotes | 1 |
| T14755 | 469-475 | NN | denotes | Figure |
| T14754 | 468-469 | -LRB- | denotes | ( |
| T14753 | 466-467 | -RRB- | denotes | ) |
| T14752 | 465-466 | NNP | denotes | ] |
| T14751 | 463-465 | CD | denotes | 64 |
| T14750 | 462-463 | NNP | denotes | [ |
| T14749 | 459-461 | IN | denotes | in |
| T14748 | 450-458 | VBN | denotes | reviewed |
| T14747 | 449-450 | -LRB- | denotes | ( |
| T14746 | 437-448 | NN | denotes | stimulation |
| T14745 | 428-436 | NN | denotes | receptor |
| T14744 | 421-427 | NNP | denotes | T-cell |
| T14743 | 417-420 | CC | denotes | and |
| T14742 | 412-416 | NNP | denotes | RANK |
| T14741 | 410-411 | , | denotes | , |
| T14740 | 406-410 | NNP | denotes | TNFR |
| T14739 | 403-405 | IN | denotes | by |
| T14738 | 393-402 | VBN | denotes | initiated |
| T14737 | 382-392 | VBG | denotes | signalling |
| T14736 | 376-381 | JJ | denotes | NF-κB |
| T14735 | 366-375 | VBZ | denotes | regulates |
| T14734 | 355-365 | RB | denotes | negatively |
| T14733 | 350-354 | IN | denotes | that |
| T14732 | 343-349 | NN | denotes | enzyme |
| T14731 | 326-342 | VBG | denotes | deubiquitinating |
| T14730 | 324-325 | DT | denotes | a |
| T14729 | 321-323 | VBZ | denotes | is |
| T14728 | 316-320 | NNP | denotes | CYLD |
| T14727 | 314-315 | . | denotes | . |
| T14726 | 313-314 | -RRB- | denotes | ) |
| T14725 | 312-313 | NNP | denotes | ] |
| T14724 | 310-312 | CD | denotes | 64 |
| T14723 | 309-310 | NNP | denotes | [ |
| T14722 | 306-308 | IN | denotes | in |
| T14721 | 297-305 | VBN | denotes | reviewed |
| T14720 | 296-297 | -LRB- | denotes | ( |
| T14719 | 277-295 | NN | denotes | osteoclastogenesis |
| T14718 | 273-276 | CC | denotes | and |
| T14717 | 271-272 | , | denotes | , |
| T14716 | 256-271 | NN | denotes | spermatogenesis |
| T14715 | 254-255 | , | denotes | , |
| T14714 | 243-254 | NN | denotes | progression |
| T14713 | 237-242 | NN | denotes | cycle |
| T14712 | 232-236 | NN | denotes | cell |
| T14711 | 229-231 | TO | denotes | to |
| T14710 | 216-228 | NN | denotes | inflammation |
| T14709 | 212-215 | CC | denotes | and |
| T14708 | 203-211 | NN | denotes | immunity |
| T14707 | 198-202 | IN | denotes | from |
| T14706 | 190-197 | VBG | denotes | ranging |
| T14705 | 180-189 | NNS | denotes | processes |
| T14704 | 166-179 | JJ | denotes | physiological |
| T14703 | 158-165 | JJ | denotes | diverse |
| T14702 | 155-157 | IN | denotes | in |
| T14701 | 153-154 | , | denotes | , |
| T14700 | 146-153 | RB | denotes | however |
| T14699 | 144-145 | , | denotes | , |
| T14698 | 136-144 | VBN | denotes | involved |
| T14697 | 131-135 | RB | denotes | also |
| T14696 | 128-130 | VBZ | denotes | is |
| T14695 | 123-127 | NNP | denotes | CYLD |
| T14694 | 121-122 | . | denotes | . |
| T14693 | 120-121 | NNP | denotes | ] |
| T14692 | 118-120 | CD | denotes | 63 |
| T14691 | 117-118 | NNP | denotes | [ |
| T14690 | 101-116 | NN | denotes | cylindromatosis |
| T14689 | 92-100 | JJ | denotes | familial |
| T14688 | 89-91 | IN | denotes | in |
| T14687 | 80-88 | VBN | denotes | involved |
| T14686 | 69-79 | NN | denotes | suppressor |
| T14685 | 62-68 | NN | denotes | tumour |
| T14684 | 60-61 | DT | denotes | a |
| T14683 | 57-59 | IN | denotes | as |
| T14682 | 46-56 | VBN | denotes | identified |
| T14681 | 35-45 | RB | denotes | originally |
| T14680 | 31-34 | VBD | denotes | was |
| T14679 | 23-30 | NN | denotes | protein |
| T14678 | 21-22 | -RRB- | denotes | ) |
| T14677 | 17-21 | NNP | denotes | CYLD |
| T14676 | 16-17 | -LRB- | denotes | ( |
| T14675 | 0-15 | NNP | denotes | Cylindromatosis |
| T14856 | 1011-1012 | . | denotes | . |
| T14855 | 1010-1011 | NNP | denotes | ] |
| T14854 | 1008-1010 | CD | denotes | 64 |
| T14853 | 1007-1008 | NNP | denotes | [ |
| T14852 | 997-1006 | JJ | denotes | dependent |
| T14851 | 987-996 | JJ | denotes | cell-type |
| T14850 | 984-986 | VB | denotes | be |
| T14849 | 979-983 | RB | denotes | also |
| T14848 | 973-978 | MD | denotes | might |
| T14847 | 964-972 | NN | denotes | activity |
| T14846 | 955-963 | JJ | denotes | relative |
| T14845 | 949-954 | PRP$ | denotes | their |
| T14844 | 947-948 | , | denotes | , |
| T14843 | 939-947 | NN | denotes | addition |
| T14842 | 936-938 | IN | denotes | In |
| T14841 | 934-935 | . | denotes | . |
| T14840 | 924-934 | NN | denotes | signalling |
| T14839 | 918-923 | JJ | denotes | early |
| T14838 | 914-917 | CC | denotes | and |
| T14837 | 901-913 | JJ | denotes | constitutive |
| T14836 | 892-900 | VB | denotes | regulate |
| T14835 | 886-891 | MD | denotes | would |
| T14834 | 881-885 | NNP | denotes | CYLD |
| T14833 | 873-880 | IN | denotes | whereas |
| R9697 | T14675 | T14682 | nsubjpass | Cylindromatosis,identified |
| R9698 | T14676 | T14677 | punct | (,CYLD |
| R9699 | T14677 | T14675 | appos | CYLD,Cylindromatosis |
| R9700 | T14678 | T14677 | punct | ),CYLD |
| R9701 | T14679 | T14682 | nsubjpass | protein,identified |
| R9702 | T14680 | T14682 | auxpass | was,identified |
| R9703 | T14681 | T14682 | advmod | originally,identified |
| R9704 | T14682 | T14682 | ROOT | identified,identified |
| R9705 | T14683 | T14682 | prep | as,identified |
| R9706 | T14684 | T14686 | det | a,suppressor |
| R9707 | T14685 | T14686 | compound | tumour,suppressor |
| R9708 | T14686 | T14683 | pobj | suppressor,as |
| R9709 | T14687 | T14686 | acl | involved,suppressor |
| R9710 | T14688 | T14687 | prep | in,involved |
| R9711 | T14689 | T14690 | amod | familial,cylindromatosis |
| R9712 | T14690 | T14691 | compound | cylindromatosis,[ |
| R9713 | T14691 | T14688 | pobj | [,in |
| R9714 | T14692 | T14693 | nummod | 63,] |
| R9715 | T14693 | T14691 | appos | ],[ |
| R9716 | T14694 | T14682 | punct | .,identified |
| R9717 | T14695 | T14698 | nsubjpass | CYLD,involved |
| R9718 | T14696 | T14698 | auxpass | is,involved |
| R9719 | T14697 | T14698 | advmod | also,involved |
| R9720 | T14698 | T14721 | ccomp | involved,reviewed |
| R9721 | T14699 | T14721 | punct | ",",reviewed |
| R9722 | T14700 | T14721 | advmod | however,reviewed |
| R9723 | T14701 | T14721 | punct | ",",reviewed |
| R9724 | T14702 | T14721 | prep | in,reviewed |
| R9725 | T14703 | T14705 | amod | diverse,processes |
| R9726 | T14704 | T14705 | amod | physiological,processes |
| R9727 | T14705 | T14702 | pobj | processes,in |
| R9728 | T14706 | T14705 | acl | ranging,processes |
| R9729 | T14707 | T14706 | prep | from,ranging |
| R9730 | T14708 | T14707 | pobj | immunity,from |
| R9731 | T14709 | T14708 | cc | and,immunity |
| R9732 | T14710 | T14708 | conj | inflammation,immunity |
| R9733 | T14711 | T14721 | prep | to,reviewed |
| R9734 | T14712 | T14713 | compound | cell,cycle |
| R9735 | T14713 | T14714 | compound | cycle,progression |
| R9736 | T14714 | T14711 | pobj | progression,to |
| R9737 | T14715 | T14714 | punct | ",",progression |
| R9738 | T14716 | T14714 | conj | spermatogenesis,progression |
| R9739 | T14717 | T14716 | punct | ",",spermatogenesis |
| R9740 | T14718 | T14716 | cc | and,spermatogenesis |
| R9741 | T14719 | T14716 | conj | osteoclastogenesis,spermatogenesis |
| R9742 | T14720 | T14721 | punct | (,reviewed |
| R9743 | T14721 | T14721 | ROOT | reviewed,reviewed |
| R9744 | T14722 | T14721 | prep | in,reviewed |
| R9745 | T14723 | T14722 | pobj | [,in |
| R9746 | T14724 | T14725 | nummod | 64,] |
| R9747 | T14725 | T14723 | appos | ],[ |
| R9748 | T14726 | T14723 | punct | ),[ |
| R9749 | T14727 | T14721 | punct | .,reviewed |
| R9750 | T14728 | T14729 | nsubj | CYLD,is |
| R9751 | T14729 | T14729 | ROOT | is,is |
| R9752 | T14730 | T14732 | det | a,enzyme |
| R9753 | T14731 | T14732 | amod | deubiquitinating,enzyme |
| R9754 | T14732 | T14729 | attr | enzyme,is |
| R9755 | T14733 | T14735 | nsubj | that,regulates |
| R9756 | T14734 | T14735 | advmod | negatively,regulates |
| R9757 | T14735 | T14732 | relcl | regulates,enzyme |
| R9758 | T14736 | T14737 | amod | NF-κB,signalling |
| R9759 | T14737 | T14735 | xcomp | signalling,regulates |
| R9760 | T14738 | T14737 | acl | initiated,signalling |
| R9761 | T14739 | T14738 | agent | by,initiated |
| R9762 | T14740 | T14739 | pobj | TNFR,by |
| R9763 | T14741 | T14740 | punct | ",",TNFR |
| R9764 | T14742 | T14740 | conj | RANK,TNFR |
| R9765 | T14743 | T14742 | cc | and,RANK |
| R9766 | T14744 | T14742 | conj | T-cell,RANK |
| R9767 | T14745 | T14746 | compound | receptor,stimulation |
| R9768 | T14746 | T14740 | appos | stimulation,TNFR |
| R9769 | T14747 | T14748 | punct | (,reviewed |
| R9770 | T14748 | T14737 | acl | reviewed,signalling |
| R9771 | T14749 | T14748 | prep | in,reviewed |
| R9772 | T14750 | T14749 | pobj | [,in |
| R9773 | T14751 | T14752 | nummod | 64,] |
| R9774 | T14752 | T14750 | appos | ],[ |
| R9775 | T14753 | T14750 | punct | ),[ |
| R9776 | T14754 | T14755 | punct | (,Figure |
| R9777 | T14755 | T14748 | appos | Figure,reviewed |
| R9778 | T14756 | T14755 | nummod | 1,Figure |
| R9779 | T14757 | T14755 | punct | ),Figure |
| R9780 | T14758 | T14755 | punct | ",",Figure |
| R9781 | T14759 | T14755 | prep | by,Figure |
| R9782 | T14760 | T14764 | amod | deubiquitina-ting,proteins |
| R9783 | T14761 | T14764 | amod | several,proteins |
| R9784 | T14762 | T14763 | npadvmod | NF-κB,signalling |
| R9785 | T14763 | T14764 | amod | signalling,proteins |
| R9786 | T14764 | T14759 | pobj | proteins,by |
| R9787 | T14765 | T14764 | prep | including,proteins |
| R9788 | T14766 | T14765 | pobj | NEMO,including |
| R9789 | T14767 | T14766 | punct | ",",NEMO |
| R9790 | T14768 | T14766 | conj | TRAF2,NEMO |
| R9791 | T14769 | T14768 | punct | ",",TRAF2 |
| R9792 | T14770 | T14768 | conj | TRAF6,TRAF2 |
| R9793 | T14771 | T14770 | punct | ",",TRAF6 |
| R9794 | T14772 | T14770 | conj | TRAF7,TRAF6 |
| R9795 | T14773 | T14772 | punct | ",",TRAF7 |
| R9796 | T14774 | T14772 | conj | RIP1,TRAF7 |
| R9797 | T14775 | T14774 | cc | and,RIP1 |
| R9798 | T14776 | T14774 | conj | TAK1,RIP1 |
| R9799 | T14777 | T14755 | punct | .,Figure |
| R9800 | T14778 | T14783 | nsubjpass | Many,targeted |
| R9801 | T14779 | T14778 | prep | of,Many |
| R9802 | T14780 | T14779 | pobj | these,of |
| R9803 | T14781 | T14783 | auxpass | are,targeted |
| R9804 | T14782 | T14783 | advmod | also,targeted |
| R9805 | T14783 | T14783 | ROOT | targeted,targeted |
| R9806 | T14784 | T14783 | agent | by,targeted |
| R9807 | T14785 | T14784 | pobj | A20,by |
| R9808 | T14786 | T14783 | cc | and,targeted |
| R9809 | T14787 | T14788 | nsubj | it,is |
| R9810 | T14788 | T14783 | conj | is,targeted |
| R9811 | T14789 | T14788 | advmod | still,is |
| R9812 | T14790 | T14788 | neg | not,is |
| R9813 | T14791 | T14788 | acomp | clear,is |
| R9814 | T14792 | T14795 | advmod | why,needs |
| R9815 | T14793 | T14794 | det | the,cell |
| R9816 | T14794 | T14795 | nsubj | cell,needs |
| R9817 | T14795 | T14788 | ccomp | needs,is |
| R9818 | T14796 | T14802 | nsubj | A20,control |
| R9819 | T14797 | T14799 | advmod | as,as |
| R9820 | T14798 | T14799 | advmod | well,as |
| R9821 | T14799 | T14796 | cc | as,A20 |
| R9822 | T14800 | T14796 | conj | CYLD,A20 |
| R9823 | T14801 | T14802 | aux | to,control |
| R9824 | T14802 | T14795 | ccomp | control,needs |
| R9825 | T14803 | T14804 | amod | NF-κB,activation |
| R9826 | T14804 | T14802 | dobj | activation,control |
| R9827 | T14805 | T14788 | punct | .,is |
| R9828 | T14806 | T14810 | mark | As,expressed |
| R9829 | T14807 | T14810 | nsubjpass | A20,expressed |
| R9830 | T14808 | T14810 | auxpass | is,expressed |
| R9831 | T14809 | T14810 | advmod | only,expressed |
| R9832 | T14810 | T14821 | advcl | expressed,suggested |
| R9833 | T14811 | T14810 | prep | in,expressed |
| R9834 | T14812 | T14814 | amod | many,types |
| R9835 | T14813 | T14814 | compound | cell,types |
| R9836 | T14814 | T14811 | pobj | types,in |
| R9837 | T14815 | T14810 | prep | upon,expressed |
| R9838 | T14816 | T14815 | pobj | stimulation,upon |
| R9839 | T14817 | T14821 | punct | ",",suggested |
| R9840 | T14818 | T14821 | nsubjpass | it,suggested |
| R9841 | T14819 | T14821 | aux | has,suggested |
| R9842 | T14820 | T14821 | auxpass | been,suggested |
| R9843 | T14821 | T14821 | ROOT | suggested,suggested |
| R9844 | T14822 | T14826 | mark | that,regulates |
| R9845 | T14823 | T14824 | det | this,protein |
| R9846 | T14824 | T14826 | nsubj | protein,regulates |
| R9847 | T14825 | T14826 | advmod | mainly,regulates |
| R9848 | T14826 | T14821 | ccomp | regulates,suggested |
| R9849 | T14827 | T14828 | amod | later,phases |
| R9850 | T14828 | T14826 | dobj | phases,regulates |
| R9851 | T14829 | T14828 | prep | of,phases |
| R9852 | T14830 | T14831 | amod | NF-κB,signalling |
| R9853 | T14831 | T14829 | pobj | signalling,of |
| R9854 | T14832 | T14826 | punct | ",",regulates |
| R9855 | T14833 | T14836 | mark | whereas,regulate |
| R9856 | T14834 | T14836 | nsubj | CYLD,regulate |
| R9857 | T14835 | T14836 | aux | would,regulate |
| R9858 | T14836 | T14826 | advcl | regulate,regulates |
| R9859 | T14837 | T14836 | dobj | constitutive,regulate |
| R9860 | T14838 | T14837 | cc | and,constitutive |
| R9861 | T14839 | T14840 | amod | early,signalling |
| R9862 | T14840 | T14837 | conj | signalling,constitutive |
| R9863 | T14841 | T14821 | punct | .,suggested |
| R9864 | T14842 | T14850 | prep | In,be |
| R9865 | T14843 | T14842 | pobj | addition,In |
| R9866 | T14844 | T14850 | punct | ",",be |
| R9867 | T14845 | T14847 | poss | their,activity |
| R9868 | T14846 | T14847 | amod | relative,activity |
| R9869 | T14847 | T14850 | nsubj | activity,be |
| R9870 | T14848 | T14850 | aux | might,be |
| R9871 | T14849 | T14850 | advmod | also,be |
| R9872 | T14850 | T14850 | ROOT | be,be |
| R9873 | T14851 | T14852 | npadvmod | cell-type,dependent |
| R9874 | T14852 | T14855 | amod | dependent,] |
| R9875 | T14853 | T14855 | nmod | [,] |
| R9876 | T14854 | T14855 | nummod | 64,] |
| R9877 | T14855 | T14850 | attr | ],be |
| R9878 | T14856 | T14850 | punct | .,be |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15106 | 735-744 | Gene_expression | denotes | expressed |
| T15089 | 881-885 | Protein | denotes | CYLD |
| T15088 | 723-726 | Protein | denotes | A20 |
| T15087 | 686-690 | Protein | denotes | CYLD |
| T15086 | 671-674 | Protein | denotes | A20 |
| T15085 | 622-625 | Protein | denotes | A20 |
| T15084 | 551-556 | Protein | denotes | TRAF2 |
| T15083 | 545-549 | Protein | denotes | NEMO |
| T15082 | 412-416 | Protein | denotes | RANK |
| T15081 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T15080 | 316-320 | Protein | denotes | CYLD |
| T15079 | 581-585 | Protein | denotes | TAK1 |
| T15078 | 572-576 | Protein | denotes | RIP1 |
| T15077 | 565-570 | Protein | denotes | TRAF7 |
| T15076 | 558-563 | Protein | denotes | TRAF6 |
| T15075 | 123-127 | Protein | denotes | CYLD |
| T15074 | 17-21 | Protein | denotes | CYLD |
| T15073 | 0-15 | Protein | denotes | Cylindromatosis |
| R10051 | T15088 | T15106 | themeOf | A20,expressed |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15027 | 723-726 | http://www.uniprot.org/uniprot/P21580 | denotes | A20 |
| T15026 | 671-674 | http://www.uniprot.org/uniprot/P21580 | denotes | A20 |
| T15025 | 622-625 | http://www.uniprot.org/uniprot/P21580 | denotes | A20 |
| T15024 | 572-576 | http://www.uniprot.org/uniprot/Q13546 | denotes | RIP1 |
| T15021 | 558-563 | http://www.uniprot.org/uniprot/Q9Y4K3 | denotes | TRAF6 |
| T15020 | 551-556 | http://www.uniprot.org/uniprot/Q12933 | denotes | TRAF2 |
| T15019 | 545-549 | http://www.uniprot.org/uniprot/Q9Y6K9 | denotes | NEMO |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14227 | 881-885 | Protein | denotes | CYLD |
| T14226 | 723-726 | Protein | denotes | A20 |
| T14225 | 686-690 | Protein | denotes | CYLD |
| T14224 | 671-674 | Protein | denotes | A20 |
| T14223 | 622-625 | Protein | denotes | A20 |
| T14222 | 581-585 | Protein | denotes | TAK1 |
| T14221 | 572-576 | Protein | denotes | RIP1 |
| T14220 | 565-570 | Protein | denotes | TRAF7 |
| T14219 | 558-563 | Protein | denotes | TRAF6 |
| T14218 | 551-556 | Protein | denotes | TRAF2 |
| T14217 | 545-549 | Protein | denotes | NEMO |
| T14216 | 412-416 | Protein | denotes | RANK |
| T14215 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T14214 | 316-320 | Protein | denotes | CYLD |
| T14213 | 123-127 | Protein | denotes | CYLD |
| T14212 | 17-21 | Protein | denotes | CYLD |
| T14211 | 0-15 | Protein | denotes | Cylindromatosis |
bionlp-st-ge-2016-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14209 | 581-585 | Antecedent | denotes | TAK1 |
| T14208 | 572-576 | Antecedent | denotes | RIP1 |
| T14207 | 565-570 | Antecedent | denotes | TRAF7 |
| T14206 | 558-563 | Antecedent | denotes | TRAF6 |
| T14205 | 551-556 | Antecedent | denotes | TRAF2 |
| T14204 | 545-549 | Antecedent | denotes | NEMO |
| T14203 | 595-600 | Anaphor | denotes | these |
| R9341 | T14203 | T14204 | boundBy | these,NEMO |
| R9342 | T14203 | T14205 | boundBy | these,TRAF2 |
| R9343 | T14203 | T14206 | boundBy | these,TRAF6 |
| R9344 | T14203 | T14207 | boundBy | these,TRAF7 |
| R9345 | T14203 | T14208 | boundBy | these,RIP1 |
| R9346 | T14203 | T14209 | boundBy | these,TAK1 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 21639951-10835629-4289491 | 118-120 | 10835629 | denotes | 63 |
| 21639951-19373246-4289492 | 310-312 | 19373246 | denotes | 64 |
| 21639951-19373246-4289493 | 463-465 | 19373246 | denotes | 64 |
| 21639951-19373246-4289494 | 1008-1010 | 19373246 | denotes | 64 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14421 | 1010-1011 | -RRB- | denotes | ] |
| T14420 | 1008-1010 | CD | denotes | 64 |
| T14419 | 1007-1008 | -LRB- | denotes | [ |
| T14418 | 997-1006 | JJ | denotes | dependent |
| T14417 | 987-996 | JJ | denotes | cell-type |
| T14416 | 984-986 | VB | denotes | be |
| T14415 | 979-983 | RB | denotes | also |
| T14414 | 973-978 | MD | denotes | might |
| T14413 | 964-972 | NN | denotes | activity |
| T14265 | 123-127 | NN | denotes | CYLD |
| T14264 | 120-121 | -RRB- | denotes | ] |
| T14263 | 118-120 | CD | denotes | 63 |
| T14262 | 117-118 | -LRB- | denotes | [ |
| T14261 | 101-116 | NN | denotes | cylindromatosis |
| T14260 | 92-100 | JJ | denotes | familial |
| T14259 | 89-91 | IN | denotes | in |
| T14258 | 80-88 | VB | denotes | involved |
| T14257 | 69-79 | NN | denotes | suppressor |
| T14256 | 62-68 | NN | denotes | tumour |
| T14255 | 60-61 | DT | denotes | a |
| T14254 | 57-59 | IN | denotes | as |
| T14253 | 46-56 | VB | denotes | identified |
| T14252 | 35-45 | RB | denotes | originally |
| T14251 | 31-34 | VB | denotes | was |
| T14250 | 23-30 | NN | denotes | protein |
| T14249 | 21-22 | -RRB- | denotes | ) |
| T14248 | 17-21 | NN | denotes | CYLD |
| T14247 | 16-17 | -LRB- | denotes | ( |
| T14246 | 0-15 | NN | denotes | Cylindromatosis |
| T14412 | 955-963 | JJ | denotes | relative |
| T14411 | 949-954 | PRP-DOLLAR- | denotes | their |
| T14410 | 947-948 | -COMMA- | denotes | , |
| T14409 | 939-947 | NN | denotes | addition |
| T14408 | 936-938 | IN | denotes | In |
| T14407 | 924-934 | NN | denotes | signalling |
| T14406 | 918-923 | JJ | denotes | early |
| T14405 | 914-917 | CC | denotes | and |
| T14404 | 901-913 | JJ | denotes | constitutive |
| T14403 | 892-900 | VB | denotes | regulate |
| T14402 | 886-891 | MD | denotes | would |
| T14401 | 881-885 | NN | denotes | CYLD |
| T14400 | 873-880 | IN | denotes | whereas |
| T14399 | 871-872 | -COMMA- | denotes | , |
| T14398 | 861-871 | NN | denotes | signalling |
| T14397 | 855-860 | NN | denotes | NF-κB |
| T14396 | 852-854 | IN | denotes | of |
| T14395 | 845-851 | NN | denotes | phases |
| T14394 | 839-844 | JJ | denotes | later |
| T14393 | 829-838 | VB | denotes | regulates |
| T14392 | 822-828 | RB | denotes | mainly |
| T14391 | 814-821 | NN | denotes | protein |
| T14390 | 809-813 | DT | denotes | this |
| T14389 | 804-808 | IN | denotes | that |
| T14388 | 794-803 | VB | denotes | suggested |
| T14387 | 789-793 | VB | denotes | been |
| T14386 | 785-788 | VB | denotes | has |
| T14385 | 782-784 | PRP | denotes | it |
| T14384 | 780-781 | -COMMA- | denotes | , |
| T14383 | 769-780 | NN | denotes | stimulation |
| T14382 | 764-768 | IN | denotes | upon |
| T14381 | 758-763 | NN | denotes | types |
| T14380 | 753-757 | NN | denotes | cell |
| T14379 | 748-752 | JJ | denotes | many |
| T14378 | 745-747 | IN | denotes | in |
| T14377 | 735-744 | VB | denotes | expressed |
| T14376 | 730-734 | RB | denotes | only |
| T14375 | 727-729 | VB | denotes | is |
| T14374 | 723-726 | NN | denotes | A20 |
| T14373 | 720-722 | IN | denotes | As |
| T14372 | 708-718 | NN | denotes | activation |
| T14371 | 702-707 | NN | denotes | NF-κB |
| T14370 | 694-701 | VB | denotes | control |
| T14369 | 691-693 | TO | denotes | to |
| T14368 | 686-690 | NN | denotes | CYLD |
| T14367 | 683-685 | IN | denotes | as |
| T14366 | 678-682 | RB | denotes | well |
| T14365 | 675-677 | RB | denotes | as |
| T14364 | 671-674 | NN | denotes | A20 |
| T14363 | 665-670 | VB | denotes | needs |
| T14362 | 660-664 | NN | denotes | cell |
| T14361 | 656-659 | DT | denotes | the |
| T14360 | 652-655 | WRB | denotes | why |
| T14359 | 646-651 | JJ | denotes | clear |
| T14358 | 642-645 | RB | denotes | not |
| T14357 | 636-641 | RB | denotes | still |
| T14356 | 633-635 | VB | denotes | is |
| T14355 | 630-632 | PRP | denotes | it |
| T14354 | 626-629 | CC | denotes | and |
| T14353 | 622-625 | NN | denotes | A20 |
| T14352 | 619-621 | IN | denotes | by |
| T14351 | 610-618 | VB | denotes | targeted |
| T14350 | 605-609 | RB | denotes | also |
| T14349 | 601-604 | VB | denotes | are |
| T14348 | 595-600 | DT | denotes | these |
| T14347 | 592-594 | IN | denotes | of |
| T14346 | 587-591 | JJ | denotes | Many |
| T14345 | 581-585 | NN | denotes | TAK1 |
| T14344 | 577-580 | CC | denotes | and |
| T14343 | 572-576 | NN | denotes | RIP1 |
| T14342 | 570-571 | -COMMA- | denotes | , |
| T14341 | 565-570 | NN | denotes | TRAF7 |
| T14340 | 563-564 | -COMMA- | denotes | , |
| T14339 | 558-563 | NN | denotes | TRAF6 |
| T14338 | 556-557 | -COMMA- | denotes | , |
| T14337 | 551-556 | NN | denotes | TRAF2 |
| T14336 | 549-550 | -COMMA- | denotes | , |
| T14335 | 545-549 | NN | denotes | NEMO |
| T14334 | 535-544 | VB | denotes | including |
| T14333 | 526-534 | NN | denotes | proteins |
| T14332 | 515-525 | NN | denotes | signalling |
| T14331 | 509-514 | NN | denotes | NF-κB |
| T14330 | 501-508 | JJ | denotes | several |
| T14329 | 483-500 | JJ | denotes | deubiquitina-ting |
| T14328 | 480-482 | IN | denotes | by |
| T14327 | 478-479 | -COMMA- | denotes | , |
| T14326 | 477-478 | -RRB- | denotes | ) |
| T14325 | 476-477 | CD | denotes | 1 |
| T14324 | 469-475 | NN | denotes | Figure |
| T14323 | 468-469 | -LRB- | denotes | ( |
| T14322 | 466-467 | -RRB- | denotes | ) |
| T14321 | 465-466 | -RRB- | denotes | ] |
| T14320 | 463-465 | CD | denotes | 64 |
| T14319 | 462-463 | -LRB- | denotes | [ |
| T14318 | 459-461 | IN | denotes | in |
| T14317 | 450-458 | VB | denotes | reviewed |
| T14316 | 449-450 | -LRB- | denotes | ( |
| T14315 | 437-448 | NN | denotes | stimulation |
| T14314 | 428-436 | NN | denotes | receptor |
| T14313 | 421-427 | NN | denotes | T-cell |
| T14312 | 417-420 | CC | denotes | and |
| T14311 | 412-416 | NN | denotes | RANK |
| T14310 | 410-411 | -COMMA- | denotes | , |
| T14309 | 406-410 | NN | denotes | TNFR |
| T14308 | 403-405 | IN | denotes | by |
| T14307 | 393-402 | VB | denotes | initiated |
| T14306 | 382-392 | NN | denotes | signalling |
| T14305 | 376-381 | NN | denotes | NF-κB |
| T14304 | 366-375 | VB | denotes | regulates |
| T14303 | 355-365 | RB | denotes | negatively |
| T14302 | 350-354 | WDT | denotes | that |
| T14301 | 343-349 | NN | denotes | enzyme |
| T14300 | 326-342 | VB | denotes | deubiquitinating |
| T14299 | 324-325 | DT | denotes | a |
| T14298 | 321-323 | VB | denotes | is |
| T14297 | 316-320 | NN | denotes | CYLD |
| T14296 | 313-314 | -RRB- | denotes | ) |
| T14295 | 312-313 | -RRB- | denotes | ] |
| T14294 | 310-312 | CD | denotes | 64 |
| T14293 | 309-310 | -LRB- | denotes | [ |
| T14292 | 306-308 | IN | denotes | in |
| T14291 | 297-305 | VB | denotes | reviewed |
| T14290 | 296-297 | -LRB- | denotes | ( |
| T14289 | 277-295 | NN | denotes | osteoclastogenesis |
| T14288 | 273-276 | CC | denotes | and |
| T14287 | 271-272 | -COMMA- | denotes | , |
| T14286 | 256-271 | NN | denotes | spermatogenesis |
| T14285 | 254-255 | -COMMA- | denotes | , |
| T14284 | 243-254 | NN | denotes | progression |
| T14283 | 237-242 | NN | denotes | cycle |
| T14282 | 232-236 | NN | denotes | cell |
| T14281 | 229-231 | TO | denotes | to |
| T14280 | 216-228 | NN | denotes | inflammation |
| T14279 | 212-215 | CC | denotes | and |
| T14278 | 203-211 | NN | denotes | immunity |
| T14277 | 198-202 | IN | denotes | from |
| T14276 | 190-197 | VB | denotes | ranging |
| T14275 | 180-189 | NN | denotes | processes |
| T14274 | 166-179 | JJ | denotes | physiological |
| T14273 | 158-165 | JJ | denotes | diverse |
| T14272 | 155-157 | IN | denotes | in |
| T14271 | 153-154 | -COMMA- | denotes | , |
| T14270 | 146-153 | RB | denotes | however |
| T14269 | 144-145 | -COMMA- | denotes | , |
| T14268 | 136-144 | VB | denotes | involved |
| T14267 | 131-135 | RB | denotes | also |
| T14266 | 128-130 | VB | denotes | is |
| R9348 | T14246 | T14247 | arg1Of | Cylindromatosis,( |
| R9349 | T14248 | T14247 | arg2Of | CYLD,( |
| R9350 | T14249 | T14247 | arg3Of | ),( |
| R9351 | T14250 | T14246 | arg1Of | protein,Cylindromatosis |
| R9352 | T14250 | T14251 | arg1Of | protein,was |
| R9353 | T14250 | T14253 | arg2Of | protein,identified |
| R9354 | T14253 | T14251 | arg2Of | identified,was |
| R9355 | T14253 | T14252 | arg1Of | identified,originally |
| R9356 | T14253 | T14254 | arg1Of | identified,as |
| R9357 | T14257 | T14254 | arg2Of | suppressor,as |
| R9358 | T14257 | T14255 | arg1Of | suppressor,a |
| R9359 | T14257 | T14256 | arg1Of | suppressor,tumour |
| R9360 | T14257 | T14258 | arg2Of | suppressor,involved |
| R9361 | T14258 | T14259 | arg1Of | involved,in |
| R9362 | T14261 | T14259 | arg2Of | cylindromatosis,in |
| R9363 | T14261 | T14260 | arg1Of | cylindromatosis,familial |
| R9364 | T14261 | T14262 | arg1Of | cylindromatosis,[ |
| R9365 | T14263 | T14262 | arg2Of | 63,[ |
| R9366 | T14264 | T14262 | arg3Of | ],[ |
| R9367 | T14265 | T14266 | arg1Of | CYLD,is |
| R9368 | T14265 | T14268 | arg2Of | CYLD,involved |
| R9369 | T14268 | T14266 | arg2Of | involved,is |
| R9370 | T14268 | T14267 | arg1Of | involved,also |
| R9371 | T14268 | T14269 | arg1Of | involved,"," |
| R9372 | T14268 | T14270 | arg1Of | involved,however |
| R9373 | T14268 | T14271 | arg1Of | involved,"," |
| R9374 | T14268 | T14272 | arg1Of | involved,in |
| R9375 | T14275 | T14272 | arg2Of | processes,in |
| R9376 | T14275 | T14273 | arg1Of | processes,diverse |
| R9377 | T14275 | T14274 | arg1Of | processes,physiological |
| R9378 | T14275 | T14276 | arg1Of | processes,ranging |
| R9379 | T14276 | T14277 | arg1Of | ranging,from |
| R9380 | T14276 | T14281 | arg1Of | ranging,to |
| R9381 | T14278 | T14279 | arg1Of | immunity,and |
| R9382 | T14279 | T14277 | arg2Of | and,from |
| R9383 | T14280 | T14279 | arg2Of | inflammation,and |
| R9384 | T14284 | T14282 | arg1Of | progression,cell |
| R9385 | T14284 | T14283 | arg1Of | progression,cycle |
| R9386 | T14284 | T14285 | arg1Of | progression,"," |
| R9387 | T14285 | T14288 | arg1Of | ",",and |
| R9388 | T14286 | T14285 | arg2Of | spermatogenesis,"," |
| R9389 | T14288 | T14281 | arg2Of | and,to |
| R9390 | T14288 | T14287 | arg1Of | and,"," |
| R9391 | T14289 | T14288 | arg2Of | osteoclastogenesis,and |
| R9392 | T14289 | T14290 | arg1Of | osteoclastogenesis,( |
| R9393 | T14291 | T14290 | arg2Of | reviewed,( |
| R9394 | T14291 | T14292 | arg1Of | reviewed,in |
| R9395 | T14291 | T14293 | arg1Of | reviewed,[ |
| R9396 | T14294 | T14293 | arg2Of | 64,[ |
| R9397 | T14295 | T14293 | arg3Of | ],[ |
| R9398 | T14296 | T14290 | arg3Of | ),( |
| R9399 | T14297 | T14298 | arg1Of | CYLD,is |
| R9400 | T14298 | T14327 | arg1Of | is,"," |
| R9401 | T14298 | T14328 | arg1Of | is,by |
| R9402 | T14301 | T14298 | arg2Of | enzyme,is |
| R9403 | T14301 | T14299 | arg1Of | enzyme,a |
| R9404 | T14301 | T14300 | arg1Of | enzyme,deubiquitinating |
| R9405 | T14301 | T14302 | arg1Of | enzyme,that |
| R9406 | T14301 | T14304 | arg1Of | enzyme,regulates |
| R9407 | T14304 | T14303 | arg1Of | regulates,negatively |
| R9408 | T14306 | T14304 | arg2Of | signalling,regulates |
| R9409 | T14306 | T14305 | arg1Of | signalling,NF-κB |
| R9410 | T14306 | T14307 | arg2Of | signalling,initiated |
| R9411 | T14306 | T14316 | arg1Of | signalling,( |
| R9412 | T14306 | T14323 | arg1Of | signalling,( |
| R9413 | T14309 | T14310 | arg1Of | TNFR,"," |
| R9414 | T14310 | T14312 | arg1Of | ",",and |
| R9415 | T14311 | T14310 | arg2Of | RANK,"," |
| R9416 | T14312 | T14307 | arg1Of | and,initiated |
| R9417 | T14312 | T14308 | arg2Of | and,by |
| R9418 | T14315 | T14312 | arg2Of | stimulation,and |
| R9419 | T14315 | T14313 | arg1Of | stimulation,T-cell |
| R9420 | T14315 | T14314 | arg1Of | stimulation,receptor |
| R9421 | T14317 | T14316 | arg2Of | reviewed,( |
| R9422 | T14317 | T14318 | arg1Of | reviewed,in |
| R9423 | T14317 | T14319 | arg1Of | reviewed,[ |
| R9424 | T14320 | T14319 | arg2Of | 64,[ |
| R9425 | T14321 | T14319 | arg3Of | ],[ |
| R9426 | T14322 | T14316 | arg3Of | ),( |
| R9427 | T14324 | T14323 | arg2Of | Figure,( |
| R9428 | T14324 | T14325 | arg1Of | Figure,1 |
| R9429 | T14326 | T14323 | arg3Of | ),( |
| R9430 | T14333 | T14328 | arg2Of | proteins,by |
| R9431 | T14333 | T14329 | arg1Of | proteins,deubiquitina-ting |
| R9432 | T14333 | T14330 | arg1Of | proteins,several |
| R9433 | T14333 | T14331 | arg1Of | proteins,NF-κB |
| R9434 | T14333 | T14332 | arg1Of | proteins,signalling |
| R9435 | T14333 | T14334 | arg1Of | proteins,including |
| R9436 | T14335 | T14336 | arg1Of | NEMO,"," |
| R9437 | T14336 | T14338 | arg1Of | ",","," |
| R9438 | T14337 | T14336 | arg2Of | TRAF2,"," |
| R9439 | T14338 | T14340 | arg1Of | ",","," |
| R9440 | T14339 | T14338 | arg2Of | TRAF6,"," |
| R9441 | T14340 | T14342 | arg1Of | ",","," |
| R9442 | T14341 | T14340 | arg2Of | TRAF7,"," |
| R9443 | T14342 | T14344 | arg1Of | ",",and |
| R9444 | T14343 | T14342 | arg2Of | RIP1,"," |
| R9445 | T14344 | T14334 | arg2Of | and,including |
| R9446 | T14345 | T14344 | arg2Of | TAK1,and |
| R9447 | T14346 | T14347 | arg1Of | Many,of |
| R9448 | T14346 | T14349 | arg1Of | Many,are |
| R9449 | T14346 | T14351 | arg2Of | Many,targeted |
| R9450 | T14348 | T14347 | arg2Of | these,of |
| R9451 | T14351 | T14349 | arg2Of | targeted,are |
| R9452 | T14351 | T14350 | arg1Of | targeted,also |
| R9453 | T14351 | T14354 | arg1Of | targeted,and |
| R9454 | T14353 | T14351 | arg1Of | A20,targeted |
| R9455 | T14353 | T14352 | arg2Of | A20,by |
| R9456 | T14356 | T14354 | arg2Of | is,and |
| R9457 | T14356 | T14357 | arg1Of | is,still |
| R9458 | T14356 | T14358 | arg1Of | is,not |
| R9459 | T14359 | T14356 | arg2Of | clear,is |
| R9460 | T14360 | T14355 | arg1Of | why,it |
| R9461 | T14360 | T14356 | arg1Of | why,is |
| R9462 | T14360 | T14359 | arg1Of | why,clear |
| R9463 | T14362 | T14361 | arg1Of | cell,the |
| R9464 | T14362 | T14363 | arg1Of | cell,needs |
| R9465 | T14363 | T14360 | arg1Of | needs,why |
| R9466 | T14363 | T14369 | modOf | needs,to |
| R9467 | T14364 | T14367 | arg1Of | A20,as |
| R9468 | T14367 | T14363 | arg2Of | as,needs |
| R9469 | T14367 | T14365 | arg1Of | as,as |
| R9470 | T14367 | T14366 | arg1Of | as,well |
| R9471 | T14368 | T14367 | arg2Of | CYLD,as |
| R9472 | T14370 | T14369 | arg1Of | control,to |
| R9473 | T14372 | T14370 | arg2Of | activation,control |
| R9474 | T14372 | T14371 | arg1Of | activation,NF-κB |
| R9475 | T14374 | T14375 | arg1Of | A20,is |
| R9476 | T14374 | T14377 | arg2Of | A20,expressed |
| R9477 | T14377 | T14373 | arg2Of | expressed,As |
| R9478 | T14377 | T14375 | arg2Of | expressed,is |
| R9479 | T14377 | T14376 | arg1Of | expressed,only |
| R9480 | T14377 | T14378 | arg1Of | expressed,in |
| R9481 | T14377 | T14382 | arg1Of | expressed,upon |
| R9482 | T14381 | T14378 | arg2Of | types,in |
| R9483 | T14381 | T14379 | arg1Of | types,many |
| R9484 | T14381 | T14380 | arg1Of | types,cell |
| R9485 | T14383 | T14382 | arg2Of | stimulation,upon |
| R9486 | T14385 | T14386 | arg1Of | it,has |
| R9487 | T14385 | T14387 | arg1Of | it,been |
| R9488 | T14385 | T14388 | arg2Of | it,suggested |
| R9489 | T14388 | T14373 | arg1Of | suggested,As |
| R9490 | T14388 | T14384 | arg1Of | suggested,"," |
| R9491 | T14388 | T14386 | arg2Of | suggested,has |
| R9492 | T14388 | T14387 | arg2Of | suggested,been |
| R9493 | T14391 | T14390 | arg1Of | protein,this |
| R9494 | T14391 | T14393 | arg1Of | protein,regulates |
| R9495 | T14393 | T14392 | arg1Of | regulates,mainly |
| R9496 | T14393 | T14400 | arg1Of | regulates,whereas |
| R9497 | T14395 | T14393 | arg2Of | phases,regulates |
| R9498 | T14395 | T14394 | arg1Of | phases,later |
| R9499 | T14395 | T14396 | arg1Of | phases,of |
| R9500 | T14398 | T14396 | arg2Of | signalling,of |
| R9501 | T14398 | T14397 | arg1Of | signalling,NF-κB |
| R9502 | T14400 | T14388 | arg3Of | whereas,suggested |
| R9503 | T14400 | T14389 | arg1Of | whereas,that |
| R9504 | T14400 | T14399 | arg1Of | whereas,"," |
| R9505 | T14401 | T14402 | arg1Of | CYLD,would |
| R9506 | T14401 | T14403 | arg1Of | CYLD,regulate |
| R9507 | T14403 | T14400 | arg2Of | regulate,whereas |
| R9508 | T14403 | T14402 | arg2Of | regulate,would |
| R9509 | T14404 | T14405 | arg1Of | constitutive,and |
| R9510 | T14406 | T14405 | arg2Of | early,and |
| R9511 | T14407 | T14403 | arg2Of | signalling,regulate |
| R9512 | T14407 | T14404 | arg1Of | signalling,constitutive |
| R9513 | T14407 | T14406 | arg1Of | signalling,early |
| R9514 | T14409 | T14408 | arg2Of | addition,In |
| R9515 | T14413 | T14411 | arg1Of | activity,their |
| R9516 | T14413 | T14412 | arg1Of | activity,relative |
| R9517 | T14413 | T14414 | arg1Of | activity,might |
| R9518 | T14413 | T14416 | arg1Of | activity,be |
| R9519 | T14413 | T14418 | arg1Of | activity,dependent |
| R9520 | T14416 | T14408 | arg1Of | be,In |
| R9521 | T14416 | T14410 | arg1Of | be,"," |
| R9522 | T14416 | T14414 | arg2Of | be,might |
| R9523 | T14416 | T14415 | arg1Of | be,also |
| R9524 | T14416 | T14419 | arg1Of | be,[ |
| R9525 | T14418 | T14416 | arg2Of | dependent,be |
| R9526 | T14418 | T14417 | arg1Of | dependent,cell-type |
| R9527 | T14420 | T14419 | arg2Of | 64,[ |
| R9528 | T14421 | T14419 | arg3Of | ],[ |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14590 | 702-718 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | NF-κB activation |
| T14587 | 924-934 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
| T14586 | 861-871 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
| T14585 | 515-525 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
| T14584 | 382-392 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
| T14583 | 326-349 | http://purl.obolibrary.org/obo/GO_0004843 | denotes | deubiquitinating enzyme |
| T14582 | 256-271 | http://purl.obolibrary.org/obo/GO_0007283 | denotes | spermatogenesis |
| T14581 | 232-254 | http://purl.obolibrary.org/obo/GO_0051726 | denotes | cell cycle progression |
| T14580 | 232-254 | http://purl.obolibrary.org/obo/GO_0007050 | denotes | cell cycle progression |
| T14579 | 232-242 | http://purl.obolibrary.org/obo/GO_0007049 | denotes | cell cycle |
| T14578 | 216-228 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14596 | 326-349 | http://purl.obolibrary.org/obo/GO_0004843 | denotes | deubiquitinating enzyme |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14604 | 987-991 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T14603 | 753-757 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T14602 | 660-664 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T14601 | 423-427 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T14600 | 232-236 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14145 | 936-1012 | Sentence | denotes | In addition, their relative activity might also be cell-type dependent [64]. |
| T14144 | 720-935 | Sentence | denotes | As A20 is only expressed in many cell types upon stimulation, it has been suggested that this protein mainly regulates later phases of NF-κB signalling, whereas CYLD would regulate constitutive and early signalling. |
| T14143 | 587-719 | Sentence | denotes | Many of these are also targeted by A20 and it is still not clear why the cell needs A20 as well as CYLD to control NF-κB activation. |
| T14142 | 316-586 | Sentence | denotes | CYLD is a deubiquitinating enzyme that negatively regulates NF-κB signalling initiated by TNFR, RANK and T-cell receptor stimulation (reviewed in [64]) (Figure 1), by deubiquitina-ting several NF-κB signalling proteins including NEMO, TRAF2, TRAF6, TRAF7, RIP1 and TAK1. |
| T14141 | 123-315 | Sentence | denotes | CYLD is also involved, however, in diverse physiological processes ranging from immunity and inflammation to cell cycle progression, spermatogenesis, and osteoclastogenesis (reviewed in [64]). |
| T14140 | 0-122 | Sentence | denotes | Cylindromatosis (CYLD) protein was originally identified as a tumour suppressor involved in familial cylindromatosis [63]. |
| T140 | 0-122 | Sentence | denotes | Cylindromatosis (CYLD) protein was originally identified as a tumour suppressor involved in familial cylindromatosis [63]. |
| T141 | 123-315 | Sentence | denotes | CYLD is also involved, however, in diverse physiological processes ranging from immunity and inflammation to cell cycle progression, spermatogenesis, and osteoclastogenesis (reviewed in [64]). |
| T142 | 316-586 | Sentence | denotes | CYLD is a deubiquitinating enzyme that negatively regulates NF-κB signalling initiated by TNFR, RANK and T-cell receptor stimulation (reviewed in [64]) (Figure 1), by deubiquitina-ting several NF-κB signalling proteins including NEMO, TRAF2, TRAF6, TRAF7, RIP1 and TAK1. |
| T143 | 587-719 | Sentence | denotes | Many of these are also targeted by A20 and it is still not clear why the cell needs A20 as well as CYLD to control NF-κB activation. |
| T144 | 720-935 | Sentence | denotes | As A20 is only expressed in many cell types upon stimulation, it has been suggested that this protein mainly regulates later phases of NF-κB signalling, whereas CYLD would regulate constitutive and early signalling. |
| T145 | 936-1012 | Sentence | denotes | In addition, their relative activity might also be cell-type dependent [64]. |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14622 | 881-885 | Protein | denotes | CYLD |
| T14621 | 723-726 | Protein | denotes | A20 |
| T14620 | 686-690 | Protein | denotes | CYLD |
| T14619 | 671-674 | Protein | denotes | A20 |
| T14618 | 622-625 | Protein | denotes | A20 |
| T14617 | 581-585 | Protein | denotes | TAK1 |
| T14616 | 572-576 | Protein | denotes | RIP1 |
| T14615 | 565-570 | Protein | denotes | TRAF7 |
| T14614 | 558-563 | Protein | denotes | TRAF6 |
| T14613 | 551-556 | Protein | denotes | TRAF2 |
| T14612 | 545-549 | Protein | denotes | NEMO |
| T14611 | 412-416 | Protein | denotes | RANK |
| T14610 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T14609 | 316-320 | Protein | denotes | CYLD |
| T14608 | 123-127 | Protein | denotes | CYLD |
| T14607 | 17-21 | Protein | denotes | CYLD |
| T14606 | 0-15 | Protein | denotes | Cylindromatosis |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15295 | 735-744 | Gene_expression | denotes | expressed |
| T15294 | 610-618 | Binding | denotes | targeted |
| T15277 | 881-885 | Protein | denotes | CYLD |
| T15276 | 723-726 | Protein | denotes | A20 |
| T15275 | 686-690 | Protein | denotes | CYLD |
| T15274 | 671-674 | Protein | denotes | A20 |
| T15273 | 622-625 | Protein | denotes | A20 |
| T15272 | 551-556 | Protein | denotes | TRAF2 |
| T15271 | 545-549 | Protein | denotes | NEMO |
| T15270 | 412-416 | Protein | denotes | RANK |
| T15269 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T15268 | 316-320 | Protein | denotes | CYLD |
| T15267 | 581-585 | Protein | denotes | TAK1 |
| T15266 | 572-576 | Protein | denotes | RIP1 |
| T15265 | 565-570 | Protein | denotes | TRAF7 |
| T15264 | 558-563 | Protein | denotes | TRAF6 |
| T15263 | 123-127 | Protein | denotes | CYLD |
| T15262 | 17-21 | Protein | denotes | CYLD |
| T15261 | 0-15 | Protein | denotes | Cylindromatosis |
| R10133 | T15273 | T15294 | themeOf | A20,targeted |
| R10134 | T15276 | T15295 | themeOf | A20,expressed |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15063 | 735-744 | Gene_expression | denotes | expressed |
| T15046 | 881-885 | Protein | denotes | CYLD |
| T15045 | 723-726 | Protein | denotes | A20 |
| T15044 | 686-690 | Protein | denotes | CYLD |
| T15043 | 671-674 | Protein | denotes | A20 |
| T15042 | 622-625 | Protein | denotes | A20 |
| T15041 | 551-556 | Protein | denotes | TRAF2 |
| T15040 | 545-549 | Protein | denotes | NEMO |
| T15039 | 412-416 | Protein | denotes | RANK |
| T15038 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T15037 | 316-320 | Protein | denotes | CYLD |
| T15036 | 581-585 | Protein | denotes | TAK1 |
| T15035 | 572-576 | Protein | denotes | RIP1 |
| T15034 | 565-570 | Protein | denotes | TRAF7 |
| T15033 | 558-563 | Protein | denotes | TRAF6 |
| T15032 | 123-127 | Protein | denotes | CYLD |
| T15031 | 17-21 | Protein | denotes | CYLD |
| T15030 | 0-15 | Protein | denotes | Cylindromatosis |
| R10041 | T15045 | T15063 | themeOf | A20,expressed |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15366 | 376-402 | Positive_regulation | denotes | NF-κB signalling initiated |
| T15364 | 421-437 | Localization | denotes | T-cell receptor |
| T15363 | 421-448 | Positive_regulation | denotes | T-cell receptor stimulation |
| T15360 | 671-718 | Regulation | denotes | A20 as well as CYLD to control NF-κB activation |
| T15359 | 702-718 | Positive_regulation | denotes | NF-κB activation |
| T15358 | 350-448 | Regulation | denotes | that negatively regulates NF-κB signalling initiated by TNFR, RANK and T-cell receptor stimulation |
| T15355 | 881-885 | Protein | denotes | CYLD |
| T15354 | 343-448 | Protein | denotes | enzyme that negatively regulates NF-κB signalling initiated by TNFR, RANK and T-cell receptor stimulation |
| T15350 | 123-127 | Protein | denotes | CYLD |
| T15349 | 702-707 | Protein | denotes | NF-κB |
| T15348 | 809-821 | Protein | denotes | this protein |
| T15347 | 545-549 | Protein | denotes | NEMO |
| T15344 | 619-625 | Protein | denotes | by A20 |
| T15342 | 723-726 | Protein | denotes | A20 |
| T15340 | 406-410 | Protein | denotes | TNFR |
| T15339 | 421-427 | Entity | denotes | T-cell |
| T15338 | 581-585 | Protein | denotes | TAK1 |
| T15336 | 748-763 | Entity | denotes | many cell types |
| T15333 | 0-22 | Protein | denotes | Cylindromatosis (CYLD) |
| T15332 | 483-534 | Protein | denotes | deubiquitina-ting several NF-κB signalling proteins |
| T15331 | 565-570 | Protein | denotes | TRAF7 |
| T15329 | 671-690 | Protein | denotes | A20 as well as CYLD |
| T15328 | 551-556 | Protein | denotes | TRAF2 |
| T15324 | 17-21 | Protein | denotes | CYLD |
| T15319 | 987-1006 | Entity | denotes | cell-type dependent |
| T15317 | 483-534 | Protein | denotes | deubiquitina-ting several NF-κB signalling proteins |
| T15316 | 686-690 | Protein | denotes | CYLD |
| T15315 | 412-416 | Protein | denotes | RANK |
| T15313 | 852-871 | Protein | denotes | of NF-κB signalling |
| T15310 | 572-576 | Protein | denotes | RIP1 |
| T15309 | 558-563 | Protein | denotes | TRAF6 |
| T15308 | 0-30 | Protein | denotes | Cylindromatosis (CYLD) protein |
| T15307 | 421-436 | Protein | denotes | T-cell receptor |
| T15306 | 316-320 | Protein | denotes | CYLD |
| T15305 | 656-664 | Entity | denotes | the cell |
| T15304 | 376-381 | Protein | denotes | NF-κB |
| T15302 | 89-121 | Protein | denotes | in familial cylindromatosis [63] |
| R10144 | T15304 | T15358 | themeOf | NF-κB,"that negatively regulates NF-κB signalling initiated by TNFR, RANK and T-cell receptor stimulation" |
| R10145 | T15304 | T15366 | themeOf | NF-κB,NF-κB signalling initiated |
| R10146 | T15307 | T15363 | themeOf | T-cell receptor,T-cell receptor stimulation |
| R10147 | T15307 | T15364 | themeOf | T-cell receptor,T-cell receptor |
| R10150 | T15329 | T15360 | causeOf | A20 as well as CYLD,A20 as well as CYLD to control NF-κB activation |
| R10152 | T15339 | T15364 | locationOf | T-cell,T-cell receptor |
| R10155 | T15349 | T15359 | themeOf | NF-κB,NF-κB activation |
| R10156 | T15359 | T15360 | themeOf | NF-κB activation,A20 as well as CYLD to control NF-κB activation |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15147 | 829-838 | Regulation | denotes | regulates |
| T15146 | 855-860 | Protein | denotes | NF-κB |
| T15145 | 694-701 | Regulation | denotes | control |
| T15144 | 708-718 | Positive_regulation | denotes | activation |
| T15143 | 702-707 | Protein | denotes | NF-κB |
| T15142 | 686-690 | Protein | denotes | CYLD |
| T15141 | 366-375 | Regulation | denotes | regulates |
| T15140 | 366-375 | Regulation | denotes | regulates |
| T15139 | 366-375 | Regulation | denotes | regulates |
| T15138 | 366-375 | Regulation | denotes | regulates |
| T15137 | 366-375 | Regulation | denotes | regulates |
| T15136 | 366-375 | Regulation | denotes | regulates |
| T15135 | 366-375 | Regulation | denotes | regulates |
| T15134 | 483-500 | Gene_expression | denotes | deubiquitina-ting |
| T15133 | 483-500 | Gene_expression | denotes | deubiquitina-ting |
| T15132 | 483-500 | Gene_expression | denotes | deubiquitina-ting |
| T15131 | 483-500 | Gene_expression | denotes | deubiquitina-ting |
| T15130 | 483-500 | Gene_expression | denotes | deubiquitina-ting |
| T15129 | 483-500 | Gene_expression | denotes | deubiquitina-ting |
| T15128 | 483-500 | Gene_expression | denotes | deubiquitina-ting |
| T15127 | 581-585 | Protein | denotes | TAK1 |
| T15126 | 572-576 | Protein | denotes | RIP1 |
| T15125 | 565-570 | Protein | denotes | TRAF7 |
| T15124 | 558-563 | Protein | denotes | TRAF6 |
| T15123 | 551-556 | Protein | denotes | TRAF2 |
| T15122 | 545-549 | Protein | denotes | NEMO |
| T15121 | 509-534 | Protein | denotes | NF-κB signalling proteins |
| T15120 | 421-436 | Protein | denotes | T-cell receptor |
| T15119 | 412-416 | Protein | denotes | RANK |
| T15118 | 406-410 | Protein | denotes | TNFR |
| T15117 | 376-381 | Protein | denotes | NF-κB |
| T15116 | 316-320 | Protein | denotes | CYLD |
| T15115 | 123-127 | Protein | denotes | CYLD |
| R10062 | T15117 | T15135 | themeOf | NF-κB,regulates |
| R10063 | T15117 | T15136 | themeOf | NF-κB,regulates |
| R10064 | T15117 | T15137 | themeOf | NF-κB,regulates |
| R10065 | T15117 | T15138 | themeOf | NF-κB,regulates |
| R10066 | T15117 | T15139 | themeOf | NF-κB,regulates |
| R10067 | T15117 | T15140 | themeOf | NF-κB,regulates |
| R10068 | T15117 | T15141 | themeOf | NF-κB,regulates |
| R10069 | T15121 | T15128 | themeOf | NF-κB signalling proteins,deubiquitina-ting |
| R10070 | T15122 | T15129 | themeOf | NEMO,deubiquitina-ting |
| R10071 | T15123 | T15130 | themeOf | TRAF2,deubiquitina-ting |
| R10072 | T15124 | T15131 | themeOf | TRAF6,deubiquitina-ting |
| R10073 | T15125 | T15132 | themeOf | TRAF7,deubiquitina-ting |
| R10074 | T15126 | T15133 | themeOf | RIP1,deubiquitina-ting |
| R10075 | T15127 | T15134 | themeOf | TAK1,deubiquitina-ting |
| R10076 | T15135 | T15128 | Cause | regulates,deubiquitina-ting |
| R10077 | T15136 | T15129 | Cause | regulates,deubiquitina-ting |
| R10078 | T15137 | T15130 | Cause | regulates,deubiquitina-ting |
| R10079 | T15138 | T15131 | Cause | regulates,deubiquitina-ting |
| R10080 | T15139 | T15132 | Cause | regulates,deubiquitina-ting |
| R10081 | T15140 | T15133 | Cause | regulates,deubiquitina-ting |
| R10082 | T15141 | T15134 | Cause | regulates,deubiquitina-ting |
| R10083 | T15143 | T15144 | themeOf | NF-κB,activation |
| R10084 | T15144 | T15145 | themeOf | activation,control |
| R10085 | T15145 | T15142 | Cause | control,CYLD |
| R10086 | T15146 | T15147 | themeOf | NF-κB,regulates |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14117 | 881-885 | Protein | denotes | CYLD |
| T14116 | 735-744 | Gene_expression | denotes | expressed |
| T14115 | 723-726 | Protein | denotes | A20 |
| T14114 | 686-690 | Protein | denotes | CYLD |
| T14113 | 671-674 | Protein | denotes | A20 |
| T14112 | 622-625 | Protein | denotes | A20 |
| T14111 | 581-585 | Protein | denotes | TAK1 |
| T14110 | 572-576 | Protein | denotes | RIP1 |
| T14109 | 565-570 | Protein | denotes | TRAF7 |
| T14108 | 558-563 | Protein | denotes | TRAF6 |
| T14107 | 551-556 | Protein | denotes | TRAF2 |
| T14106 | 545-549 | Protein | denotes | NEMO |
| T14105 | 412-416 | Protein | denotes | RANK |
| T14104 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T14103 | 316-320 | Protein | denotes | CYLD |
| T14102 | 123-127 | Protein | denotes | CYLD |
| T14101 | 17-21 | Protein | denotes | CYLD |
| T14100 | 0-15 | Protein | denotes | Cylindromatosis |
| T14082 | 881-885 | Protein | denotes | CYLD |
| T14081 | 723-726 | Protein | denotes | A20 |
| T14080 | 686-690 | Protein | denotes | CYLD |
| T14079 | 671-674 | Protein | denotes | A20 |
| T14078 | 622-625 | Protein | denotes | A20 |
| T14077 | 581-585 | Protein | denotes | TAK1 |
| T14076 | 572-576 | Protein | denotes | RIP1 |
| T14075 | 565-570 | Protein | denotes | TRAF7 |
| T14074 | 558-563 | Protein | denotes | TRAF6 |
| T14073 | 551-556 | Protein | denotes | TRAF2 |
| T14072 | 545-549 | Protein | denotes | NEMO |
| T14071 | 412-416 | Protein | denotes | RANK |
| T14070 | 326-349 | Protein | denotes | deubiquitinating enzyme |
| T14069 | 316-320 | Protein | denotes | CYLD |
| T14068 | 123-127 | Protein | denotes | CYLD |
| T14067 | 17-21 | Protein | denotes | CYLD |
| T14066 | 0-15 | Protein | denotes | Cylindromatosis |
| R9301 | T14101 | T14100 | equivalentTo | CYLD,Cylindromatosis |
| R9302 | T14103 | T14105 | themeOf | CYLD,RANK |
| R9303 | T14103 | T14104 | themeOf | CYLD,deubiquitinating enzyme |
| R9304 | T14104 | T14105 | themeOf | deubiquitinating enzyme,RANK |
| R9305 | T14115 | T14116 | themeOf | A20,expressed |