PMC:3218875 / 1865-1975
Annnotations
testone
{"project":"testone","denotations":[{"id":"T270","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T269","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T268","span":{"begin":30,"end":34},"obj":"Protein"},{"id":"T267","span":{"begin":19,"end":22},"obj":"Protein"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
bionlp-st-ge-2016-spacy-parsed
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DLUT931
{"project":"DLUT931","denotations":[{"id":"T1393","span":{"begin":19,"end":22},"obj":"Protein"},{"id":"T1385","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T1384","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T1383","span":{"begin":30,"end":34},"obj":"Protein"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1276","span":{"begin":30,"end":34},"obj":"http://www.uniprot.org/uniprot/P05231"},{"id":"T1274","span":{"begin":19,"end":22},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T366","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T365","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T364","span":{"begin":30,"end":34},"obj":"Protein"},{"id":"T363","span":{"begin":19,"end":22},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T588","span":{"begin":104,"end":110},"obj":"NN"},{"id":"T587","span":{"begin":100,"end":103},"obj":"CC"},{"id":"T586","span":{"begin":98,"end":99},"obj":"-COMMA-"},{"id":"T585","span":{"begin":90,"end":98},"obj":"NN"},{"id":"T584","span":{"begin":84,"end":89},"obj":"NN"},{"id":"T583","span":{"begin":77,"end":83},"obj":"JJ"},{"id":"T582","span":{"begin":67,"end":76},"obj":"JJ"},{"id":"T581","span":{"begin":65,"end":66},"obj":"-COMMA-"},{"id":"T580","span":{"begin":55,"end":65},"obj":"NN"},{"id":"T579","span":{"begin":53,"end":54},"obj":"-COMMA-"},{"id":"T578","span":{"begin":36,"end":53},"obj":"NN"},{"id":"T577","span":{"begin":34,"end":35},"obj":"-COMMA-"},{"id":"T576","span":{"begin":30,"end":34},"obj":"NN"},{"id":"T575","span":{"begin":28,"end":29},"obj":"-COMMA-"},{"id":"T574","span":{"begin":24,"end":28},"obj":"NN"},{"id":"T573","span":{"begin":22,"end":23},"obj":"-COMMA-"},{"id":"T572","span":{"begin":19,"end":22},"obj":"NN"},{"id":"T571","span":{"begin":16,"end":18},"obj":"IN"},{"id":"T570","span":{"begin":11,"end":15},"obj":"JJ"},{"id":"T569","span":{"begin":9,"end":10},"obj":"-COLON-"},{"id":"T568","span":{"begin":3,"end":8},"obj":"NN"},{"id":"T567","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R435","pred":"arg2Of","subj":"T568","obj":"T567"},{"id":"R436","pred":"arg1Of","subj":"T571","obj":"T570"},{"id":"R437","pred":"arg1Of","subj":"T572","obj":"T573"},{"id":"R438","pred":"arg1Of","subj":"T573","obj":"T575"},{"id":"R439","pred":"arg2Of","subj":"T574","obj":"T573"},{"id":"R440","pred":"arg1Of","subj":"T575","obj":"T577"},{"id":"R441","pred":"arg2Of","subj":"T576","obj":"T575"},{"id":"R442","pred":"arg1Of","subj":"T577","obj":"T579"},{"id":"R443","pred":"arg2Of","subj":"T578","obj":"T577"},{"id":"R444","pred":"arg1Of","subj":"T579","obj":"T581"},{"id":"R445","pred":"arg2Of","subj":"T580","obj":"T579"},{"id":"R446","pred":"arg1Of","subj":"T581","obj":"T587"},{"id":"R447","pred":"arg2Of","subj":"T585","obj":"T581"},{"id":"R448","pred":"arg1Of","subj":"T585","obj":"T582"},{"id":"R449","pred":"arg1Of","subj":"T585","obj":"T583"},{"id":"R450","pred":"arg1Of","subj":"T585","obj":"T584"},{"id":"R451","pred":"arg2Of","subj":"T587","obj":"T571"},{"id":"R452","pred":"arg1Of","subj":"T587","obj":"T586"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T794","span":{"begin":77,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0051001"},{"id":"T793","span":{"begin":77,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0050999"},{"id":"T792","span":{"begin":77,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0051000"},{"id":"T791","span":{"begin":77,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0004517"},{"id":"T790","span":{"begin":42,"end":51},"obj":"http://purl.obolibrary.org/obo/GO_0016701"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T809","span":{"begin":77,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0050998"},{"id":"T808","span":{"begin":77,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0004517"},{"id":"T807","span":{"begin":42,"end":51},"obj":"http://purl.obolibrary.org/obo/GO_0016701"},{"id":"T806","span":{"begin":30,"end":34},"obj":"http://purl.obolibrary.org/obo/GO_0005138"},{"id":"T804","span":{"begin":24,"end":28},"obj":"http://purl.obolibrary.org/obo/GO_0005149"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
simple1
{"project":"simple1","denotations":[{"id":"T824","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T823","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T822","span":{"begin":30,"end":34},"obj":"Protein"},{"id":"T821","span":{"begin":19,"end":22},"obj":"Protein"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T1517","span":{"begin":19,"end":22},"obj":"Protein"},{"id":"T1509","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T1508","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T1507","span":{"begin":30,"end":34},"obj":"Protein"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T1290","span":{"begin":19,"end":22},"obj":"Protein"},{"id":"T1282","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T1281","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T1280","span":{"begin":30,"end":34},"obj":"Protein"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T1576","span":{"begin":67,"end":99},"obj":"Protein"},{"id":"T1571","span":{"begin":3,"end":18},"obj":"Protein"},{"id":"T1569","span":{"begin":24,"end":28},"obj":"Protein"},{"id":"T1553","span":{"begin":19,"end":29},"obj":"Protein"},{"id":"T1548","span":{"begin":0,"end":110},"obj":"Protein"},{"id":"T1542","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T1529","span":{"begin":30,"end":54},"obj":"Protein"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1313","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T1312","span":{"begin":30,"end":34},"obj":"Protein"},{"id":"T1311","span":{"begin":24,"end":28},"obj":"Protein"},{"id":"T1310","span":{"begin":19,"end":22},"obj":"Protein"},{"id":"T1322","span":{"begin":67,"end":76},"obj":"Positive_regulation"},{"id":"T1314","span":{"begin":77,"end":98},"obj":"Protein"}],"relations":[{"id":"R1065","pred":"themeOf","subj":"T1314","obj":"T1322"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}
test3
{"project":"test3","denotations":[{"id":"T313","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T312","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T311","span":{"begin":30,"end":34},"obj":"Protein"},{"id":"T310","span":{"begin":19,"end":22},"obj":"Protein"},{"id":"T292","span":{"begin":67,"end":98},"obj":"Protein"},{"id":"T291","span":{"begin":36,"end":53},"obj":"Protein"},{"id":"T290","span":{"begin":30,"end":34},"obj":"Protein"},{"id":"T289","span":{"begin":19,"end":22},"obj":"Protein"}],"text":"of genes - such as TNF, IL-1, IL-6, cyclo-oxygenase-2, chemokines, inducible nitric oxide synthase, and matrix"}