PMC:3218875 / 13880-14005 JSONTXT

Annnotations TAB JSON ListView MergeView

    testone

    {"project":"testone","denotations":[{"id":"T21317","span":{"begin":107,"end":117},"obj":"Gene_expression"},{"id":"T21286","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T21285","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T21284","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T21283","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R13906","pred":"themeOf","subj":"T21285","obj":"T21317"},{"id":"R13907","pred":"equivalentTo","subj":"T21286","obj":"T21285"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T21879","span":{"begin":124,"end":125},"obj":"."},{"id":"T21878","span":{"begin":118,"end":124},"obj":"NNS"},{"id":"T21877","span":{"begin":107,"end":117},"obj":"NN"},{"id":"T21876","span":{"begin":105,"end":106},"obj":"-RRB-"},{"id":"T21875","span":{"begin":102,"end":105},"obj":"NNP"},{"id":"T21874","span":{"begin":101,"end":102},"obj":"-LRB-"},{"id":"T21873","span":{"begin":94,"end":100},"obj":"NN"},{"id":"T21872","span":{"begin":85,"end":93},"obj":"VBG"},{"id":"T21871","span":{"begin":79,"end":84},"obj":"JJ"},{"id":"T21870","span":{"begin":76,"end":78},"obj":"IN"},{"id":"T21869","span":{"begin":66,"end":75},"obj":"JJ"},{"id":"T21868","span":{"begin":63,"end":65},"obj":"VBZ"},{"id":"T21867","span":{"begin":58,"end":62},"obj":"WDT"},{"id":"T21866","span":{"begin":50,"end":57},"obj":"NN"},{"id":"T21865","span":{"begin":44,"end":49},"obj":"NN"},{"id":"T21864","span":{"begin":31,"end":43},"obj":"JJ"},{"id":"T21863","span":{"begin":27,"end":30},"obj":"DT"},{"id":"T21862","span":{"begin":18,"end":26},"obj":"VB"},{"id":"T21861","span":{"begin":14,"end":17},"obj":"MD"},{"id":"T21860","span":{"begin":9,"end":13},"obj":"NNP"},{"id":"T21859","span":{"begin":5,"end":8},"obj":"CC"},{"id":"T21858","span":{"begin":0,"end":4},"obj":"CD"}],"relations":[{"id":"R14230","pred":"ROOT","subj":"T21858","obj":"T21858"},{"id":"R14231","pred":"cc","subj":"T21859","obj":"T21858"},{"id":"R14232","pred":"nsubj","subj":"T21860","obj":"T21862"},{"id":"R14233","pred":"aux","subj":"T21861","obj":"T21862"},{"id":"R14234","pred":"conj","subj":"T21862","obj":"T21858"},{"id":"R14235","pred":"det","subj":"T21863","obj":"T21866"},{"id":"R14236","pred":"amod","subj":"T21864","obj":"T21866"},{"id":"R14237","pred":"compound","subj":"T21865","obj":"T21866"},{"id":"R14238","pred":"dobj","subj":"T21866","obj":"T21862"},{"id":"R14239","pred":"nsubj","subj":"T21867","obj":"T21868"},{"id":"R14240","pred":"relcl","subj":"T21868","obj":"T21866"},{"id":"R14241","pred":"acomp","subj":"T21869","obj":"T21868"},{"id":"R14242","pred":"prep","subj":"T21870","obj":"T21869"},{"id":"R14243","pred":"nsubj","subj":"T21871","obj":"T21872"},{"id":"R14244","pred":"pcomp","subj":"T21872","obj":"T21870"},{"id":"R14245","pred":"nmod","subj":"T21873","obj":"T21878"},{"id":"R14246","pred":"punct","subj":"T21874","obj":"T21878"},{"id":"R14247","pred":"compound","subj":"T21875","obj":"T21878"},{"id":"R14248","pred":"punct","subj":"T21876","obj":"T21877"},{"id":"R14249","pred":"compound","subj":"T21877","obj":"T21878"},{"id":"R14250","pred":"dobj","subj":"T21878","obj":"T21872"},{"id":"R14251","pred":"punct","subj":"T21879","obj":"T21862"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T22191","span":{"begin":66,"end":75},"obj":"Regulation"},{"id":"T22190","span":{"begin":107,"end":117},"obj":"Gene_expression"},{"id":"T22159","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T22158","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T22157","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T22156","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R14470","pred":"themeOf","subj":"T22158","obj":"T22190"},{"id":"R14471","pred":"themeOf","subj":"T22159","obj":"T22190"},{"id":"R14502","pred":"themeOf","subj":"T22190","obj":"T22191"},{"id":"R14503","pred":"themeOf","subj":"T22190","obj":"T22191"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T22075","span":{"begin":102,"end":105},"obj":"http://www.uniprot.org/uniprot/Q99558"},{"id":"T22074","span":{"begin":0,"end":4},"obj":"http://www.uniprot.org/uniprot/P25942"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T21501","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T21500","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T21499","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T21498","span":{"begin":0,"end":4},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T21555","span":{"begin":118,"end":124},"obj":"NN"},{"id":"T21554","span":{"begin":107,"end":117},"obj":"NN"},{"id":"T21553","span":{"begin":105,"end":106},"obj":"-RRB-"},{"id":"T21552","span":{"begin":102,"end":105},"obj":"NN"},{"id":"T21551","span":{"begin":101,"end":102},"obj":"-LRB-"},{"id":"T21550","span":{"begin":94,"end":100},"obj":"NN"},{"id":"T21549","span":{"begin":85,"end":93},"obj":"VB"},{"id":"T21548","span":{"begin":79,"end":84},"obj":"NN"},{"id":"T21547","span":{"begin":76,"end":78},"obj":"IN"},{"id":"T21546","span":{"begin":66,"end":75},"obj":"JJ"},{"id":"T21545","span":{"begin":63,"end":65},"obj":"VB"},{"id":"T21544","span":{"begin":58,"end":62},"obj":"WDT"},{"id":"T21543","span":{"begin":50,"end":57},"obj":"NN"},{"id":"T21542","span":{"begin":44,"end":49},"obj":"NN"},{"id":"T21541","span":{"begin":31,"end":43},"obj":"JJ"},{"id":"T21540","span":{"begin":27,"end":30},"obj":"DT"},{"id":"T21539","span":{"begin":18,"end":26},"obj":"VB"},{"id":"T21538","span":{"begin":14,"end":17},"obj":"MD"},{"id":"T21537","span":{"begin":9,"end":13},"obj":"NN"},{"id":"T21536","span":{"begin":5,"end":8},"obj":"CC"},{"id":"T21535","span":{"begin":0,"end":4},"obj":"NN"}],"relations":[{"id":"R14011","pred":"arg1Of","subj":"T21535","obj":"T21536"},{"id":"R14012","pred":"arg1Of","subj":"T21536","obj":"T21538"},{"id":"R14013","pred":"arg1Of","subj":"T21536","obj":"T21539"},{"id":"R14014","pred":"arg2Of","subj":"T21537","obj":"T21536"},{"id":"R14015","pred":"arg2Of","subj":"T21539","obj":"T21538"},{"id":"R14016","pred":"arg2Of","subj":"T21543","obj":"T21539"},{"id":"R14017","pred":"arg1Of","subj":"T21543","obj":"T21540"},{"id":"R14018","pred":"arg1Of","subj":"T21543","obj":"T21541"},{"id":"R14019","pred":"arg1Of","subj":"T21543","obj":"T21542"},{"id":"R14020","pred":"arg1Of","subj":"T21543","obj":"T21544"},{"id":"R14021","pred":"arg1Of","subj":"T21543","obj":"T21545"},{"id":"R14022","pred":"arg1Of","subj":"T21543","obj":"T21546"},{"id":"R14023","pred":"arg2Of","subj":"T21546","obj":"T21545"},{"id":"R14024","pred":"arg1Of","subj":"T21546","obj":"T21547"},{"id":"R14025","pred":"arg2Of","subj":"T21548","obj":"T21547"},{"id":"R14026","pred":"arg1Of","subj":"T21548","obj":"T21549"},{"id":"R14027","pred":"arg2Of","subj":"T21552","obj":"T21551"},{"id":"R14028","pred":"arg3Of","subj":"T21553","obj":"T21551"},{"id":"R14029","pred":"arg2Of","subj":"T21555","obj":"T21549"},{"id":"R14030","pred":"arg1Of","subj":"T21555","obj":"T21550"},{"id":"R14031","pred":"arg1Of","subj":"T21555","obj":"T21551"},{"id":"R14032","pred":"arg1Of","subj":"T21555","obj":"T21554"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T21743","span":{"begin":102,"end":105},"obj":"http://purl.obolibrary.org/obo/GO_0004704"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T21764","span":{"begin":102,"end":105},"obj":"http://purl.obolibrary.org/obo/GO_0004704"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    sentences

    {"project":"sentences","denotations":[{"id":"T21402","span":{"begin":0,"end":125},"obj":"Sentence"},{"id":"T75","span":{"begin":0,"end":125},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    simple1

    {"project":"simple1","denotations":[{"id":"T21823","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T21822","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T21821","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T21820","span":{"begin":0,"end":4},"obj":"Protein"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T22370","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T22369","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T22368","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T22367","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T22402","span":{"begin":66,"end":75},"obj":"Regulation"},{"id":"T22401","span":{"begin":107,"end":117},"obj":"Gene_expression"}],"relations":[{"id":"R14569","pred":"themeOf","subj":"T22369","obj":"T22402"},{"id":"R14570","pred":"themeOf","subj":"T22369","obj":"T22401"},{"id":"R14571","pred":"themeOf","subj":"T22370","obj":"T22401"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T22109","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T22108","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T22107","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T22142","span":{"begin":107,"end":117},"obj":"Gene_expression"},{"id":"T22141","span":{"begin":66,"end":75},"obj":"Regulation"},{"id":"T22110","span":{"begin":102,"end":105},"obj":"Protein"}],"relations":[{"id":"R14446","pred":"themeOf","subj":"T22109","obj":"T22141"},{"id":"R14447","pred":"themeOf","subj":"T22109","obj":"T22142"},{"id":"R14448","pred":"themeOf","subj":"T22110","obj":"T22142"},{"id":"R14467","pred":"themeOf","subj":"T22142","obj":"T22141"},{"id":"R14468","pred":"themeOf","subj":"T22142","obj":"T22141"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T22485","span":{"begin":76,"end":117},"obj":"Gene_expression"},{"id":"T22471","span":{"begin":27,"end":117},"obj":"Protein"},{"id":"T22467","span":{"begin":79,"end":106},"obj":"Protein"},{"id":"T22454","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T22435","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T22430","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R14607","pred":"themeOf","subj":"T22467","obj":"T22485"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T22260","span":{"begin":66,"end":75},"obj":"Positive_regulation"},{"id":"T22259","span":{"begin":66,"end":75},"obj":"Positive_regulation"},{"id":"T22258","span":{"begin":107,"end":117},"obj":"Gene_expression"},{"id":"T22257","span":{"begin":107,"end":117},"obj":"Gene_expression"},{"id":"T22256","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T22255","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T22254","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T22253","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T22252","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R14523","pred":"themeOf","subj":"T22255","obj":"T22257"},{"id":"R14524","pred":"themeOf","subj":"T22256","obj":"T22258"},{"id":"R14525","pred":"themeOf","subj":"T22257","obj":"T22259"},{"id":"R14526","pred":"themeOf","subj":"T22258","obj":"T22260"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}

    test3

    {"project":"test3","denotations":[{"id":"T21362","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T21361","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T21360","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T21359","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T21328","span":{"begin":102,"end":105},"obj":"Protein"},{"id":"T21327","span":{"begin":79,"end":100},"obj":"Protein"},{"id":"T21326","span":{"begin":9,"end":13},"obj":"Protein"},{"id":"T21325","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R13918","pred":"equivalentTo","subj":"T21362","obj":"T21361"}],"text":"CD40 and RANK can activate the noncanonical NF-κB pathway that is dependent on NF-κB inducing kinase (NIK) expression levels."}