PMC:3148254 / 4911-5004
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2812 | 14-18 | Protein | denotes | HOIP |
T2813 | 19-28 | Negative_regulation | denotes | deficient |
T2814 | 50-60 | Negative_regulation | denotes | disruption |
T2815 | 64-69 | Protein | denotes | Rnf31 |
T2816 | 89-93 | Protein | denotes | HOIP |
R2101 | T2812 | T2813 | themeOf | HOIP,deficient |
R2102 | T2815 | T2814 | themeOf | Rnf31,disruption |
R2103 | T2816 | T2815 | equivalentTo | HOIP,Rnf31 |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3953 | 64-69 | Protein | denotes | Rnf31 |
T3954 | 50-60 | Transcription | denotes | disruption |
R3082 | T3953 | T3954 | themeOf | Rnf31,disruption |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3983 | 14-18 | Protein | denotes | HOIP |
T3984 | 19-28 | Negative_regulation | denotes | deficient |
T3985 | 50-60 | Negative_regulation | denotes | disruption |
T3986 | 64-69 | Protein | denotes | Rnf31 |
T3987 | 89-93 | Protein | denotes | HOIP |
R3100 | T3983 | T3984 | themeOf | HOIP,deficient |
R3102 | T3986 | T3985 | themeOf | Rnf31,disruption |
R3104 | T3987 | T3986 | equivalentTo | HOIP,Rnf31 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3341 | 0-10 | NN | denotes | Generation |
T3342 | 11-13 | IN | denotes | of |
T3343 | 14-28 | JJ | denotes | HOIP-deficient |
T3344 | 29-30 | NN | denotes | B |
T3345 | 31-36 | NN | denotes | cells |
T3346 | 37-40 | IN | denotes | via |
T3347 | 41-49 | VB | denotes | targeted |
T3348 | 50-60 | NN | denotes | disruption |
T3349 | 61-63 | IN | denotes | of |
T3350 | 64-69 | NN | denotes | Rnf31 |
T3351 | 69-70 | -COMMA- | denotes | , |
T3352 | 71-74 | DT | denotes | the |
T3353 | 75-79 | NN | denotes | gene |
T3354 | 80-88 | VB | denotes | encoding |
T3355 | 89-93 | NN | denotes | HOIP |
R2586 | T3341 | T3342 | arg1Of | Generation,of |
R2587 | T3341 | T3346 | arg1Of | Generation,via |
R2588 | T3345 | T3342 | arg2Of | cells,of |
R2589 | T3345 | T3343 | arg1Of | cells,HOIP-deficient |
R2590 | T3345 | T3344 | arg1Of | cells,B |
R2591 | T3348 | T3346 | arg2Of | disruption,via |
R2592 | T3348 | T3347 | arg2Of | disruption,targeted |
R2593 | T3348 | T3349 | arg1Of | disruption,of |
R2594 | T3350 | T3349 | arg2Of | Rnf31,of |
R2595 | T3350 | T3351 | arg1Of | Rnf31,"," |
R2596 | T3353 | T3351 | arg2Of | gene,"," |
R2597 | T3353 | T3352 | arg1Of | gene,the |
R2598 | T3353 | T3354 | arg1Of | gene,encoding |
R2599 | T3355 | T3354 | arg2Of | HOIP,encoding |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2880 | 0-10 | NNP | denotes | Generation |
T2881 | 11-13 | IN | denotes | of |
T2882 | 14-28 | NNP | denotes | HOIP-deficient |
T2883 | 29-30 | NNP | denotes | B |
T2884 | 31-36 | NNS | denotes | cells |
T2885 | 37-40 | IN | denotes | via |
T2886 | 41-49 | JJ | denotes | targeted |
T2887 | 50-60 | NN | denotes | disruption |
T2888 | 61-63 | IN | denotes | of |
T2889 | 64-69 | NNP | denotes | Rnf31 |
T2890 | 69-70 | , | denotes | , |
T2891 | 71-74 | DT | denotes | the |
T2892 | 75-79 | NN | denotes | gene |
T2893 | 80-88 | VBG | denotes | encoding |
T2894 | 89-93 | NNP | denotes | HOIP |
R2125 | T2880 | T2880 | ROOT | Generation,Generation |
R2126 | T2881 | T2880 | prep | of,Generation |
R2127 | T2882 | T2883 | compound | HOIP-deficient,B |
R2128 | T2883 | T2884 | compound | B,cells |
R2129 | T2884 | T2881 | pobj | cells,of |
R2130 | T2885 | T2880 | prep | via,Generation |
R2131 | T2886 | T2887 | amod | targeted,disruption |
R2132 | T2887 | T2885 | pobj | disruption,via |
R2133 | T2888 | T2887 | prep | of,disruption |
R2134 | T2889 | T2888 | pobj | Rnf31,of |
R2135 | T2890 | T2889 | punct | ",",Rnf31 |
R2136 | T2891 | T2892 | det | the,gene |
R2137 | T2892 | T2889 | appos | gene,Rnf31 |
R2138 | T2893 | T2892 | acl | encoding,gene |
R2139 | T2894 | T2893 | dobj | HOIP,encoding |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3841 | 31-36 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2863 | 0-93 | Sentence | denotes | Generation of HOIP-deficient B cells via targeted disruption of Rnf31, the gene encoding HOIP |
T35 | 0-93 | Sentence | denotes | Generation of HOIP-deficient B cells via targeted disruption of Rnf31, the gene encoding HOIP |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3782 | 14-18 | Q96EP0 | denotes | HOIP |
T3783 | 64-69 | Q96EP0 | denotes | Rnf31 |
T3784 | 89-93 | Q96EP0 | denotes | HOIP |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2762 | 14-18 | Protein | denotes | HOIP |
T2763 | 19-28 | Negative_regulation | denotes | deficient |
T2764 | 50-60 | Negative_regulation | denotes | disruption |
T2765 | 64-69 | Protein | denotes | Rnf31 |
T2766 | 89-93 | Protein | denotes | HOIP |
R2078 | T2762 | T2763 | themeOf | HOIP,deficient |
R2079 | T2765 | T2764 | themeOf | Rnf31,disruption |
R2080 | T2766 | T2765 | equivalentTo | HOIP,Rnf31 |