PMC:3148254 / 4181-4392 JSONTXT

Annnotations TAB JSON ListView MergeView

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1166","span":{"begin":8,"end":12},"obj":"Protein"},{"id":"T1167","span":{"begin":13,"end":22},"obj":"Negative_regulation"},{"id":"T1168","span":{"begin":45,"end":49},"obj":"Protein"},{"id":"T1169","span":{"begin":54,"end":58},"obj":"Protein"}],"relations":[{"id":"R811","pred":"themeOf","subj":"T1166","obj":"T1167"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2619","span":{"begin":45,"end":49},"obj":"Protein"},{"id":"T2620","span":{"begin":54,"end":58},"obj":"Protein"},{"id":"T2621","span":{"begin":110,"end":150},"obj":"Protein"},{"id":"T2622","span":{"begin":175,"end":194},"obj":"Protein"},{"id":"T2623","span":{"begin":66,"end":76},"obj":"Gene_expression"},{"id":"T2624","span":{"begin":66,"end":76},"obj":"Gene_expression"},{"id":"T2625","span":{"begin":66,"end":76},"obj":"Gene_expression"}],"relations":[{"id":"R1982","pred":"themeOf","subj":"T2619","obj":"T2623"},{"id":"R1983","pred":"themeOf","subj":"T2620","obj":"T2624"},{"id":"R1985","pred":"themeOf","subj":"T2621","obj":"T2625"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T2695","span":{"begin":8,"end":12},"obj":"Protein"},{"id":"T2696","span":{"begin":13,"end":22},"obj":"Negative_regulation"},{"id":"T2697","span":{"begin":45,"end":49},"obj":"Protein"},{"id":"T2698","span":{"begin":54,"end":58},"obj":"Protein"}],"relations":[{"id":"R2048","pred":"themeOf","subj":"T2695","obj":"T2696"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T2124","span":{"begin":5,"end":7},"obj":"IN"},{"id":"T2125","span":{"begin":8,"end":22},"obj":"JJ"},{"id":"T2126","span":{"begin":23,"end":28},"obj":"NN"},{"id":"T2127","span":{"begin":30,"end":39},"obj":"RB"},{"id":"T2128","span":{"begin":39,"end":40},"obj":"-COMMA-"},{"id":"T2129","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T2130","span":{"begin":45,"end":49},"obj":"NN"},{"id":"T2131","span":{"begin":50,"end":53},"obj":"CC"},{"id":"T2132","span":{"begin":54,"end":58},"obj":"NN"},{"id":"T2133","span":{"begin":59,"end":65},"obj":"JJ"},{"id":"T2134","span":{"begin":66,"end":76},"obj":"NN"},{"id":"T2135","span":{"begin":77,"end":79},"obj":"IN"},{"id":"T2136","span":{"begin":80,"end":88},"obj":"NN"},{"id":"T2137","span":{"begin":89,"end":100},"obj":"NN"},{"id":"T2138","span":{"begin":101,"end":105},"obj":"IN"},{"id":"T2139","span":{"begin":106,"end":109},"obj":"DT"},{"id":"T2140","span":{"begin":110,"end":124},"obj":"NN"},{"id":"T2141","span":{"begin":125,"end":132},"obj":"NN"},{"id":"T2142","span":{"begin":133,"end":138},"obj":"JJ"},{"id":"T2143","span":{"begin":139,"end":144},"obj":"NN"},{"id":"T2144","span":{"begin":145,"end":150},"obj":"NN"},{"id":"T2145","span":{"begin":150,"end":151},"obj":"-COMMA-"},{"id":"T2146","span":{"begin":152,"end":154},"obj":"DT"},{"id":"T2147","span":{"begin":155,"end":160},"obj":"NN"},{"id":"T2148","span":{"begin":161,"end":165},"obj":"WDT"},{"id":"T2149","span":{"begin":166,"end":174},"obj":"VB"},{"id":"T2150","span":{"begin":175,"end":189},"obj":"NN"},{"id":"T2151","span":{"begin":190,"end":194},"obj":"NN"},{"id":"T2152","span":{"begin":195,"end":208},"obj":"NN"}],"relations":[{"id":"R1749","pred":"arg2Of","subj":"T2126","obj":"T2124"},{"id":"R1750","pred":"arg1Of","subj":"T2126","obj":"T2125"},{"id":"R1752","pred":"arg1Of","subj":"T2130","obj":"T2131"},{"id":"R1759","pred":"arg2Of","subj":"T2132","obj":"T2131"},{"id":"R1760","pred":"arg1Of","subj":"T2134","obj":"T2129"},{"id":"R1761","pred":"arg1Of","subj":"T2134","obj":"T2130"},{"id":"R1762","pred":"arg1Of","subj":"T2134","obj":"T2132"},{"id":"R1763","pred":"arg1Of","subj":"T2134","obj":"T2133"},{"id":"R1772","pred":"arg1Of","subj":"T2134","obj":"T2135"},{"id":"R1778","pred":"arg2Of","subj":"T2137","obj":"T2135"},{"id":"R1788","pred":"arg1Of","subj":"T2137","obj":"T2136"},{"id":"R1789","pred":"arg1Of","subj":"T2137","obj":"T2138"},{"id":"R1792","pred":"arg2Of","subj":"T2144","obj":"T2138"},{"id":"R1804","pred":"arg1Of","subj":"T2144","obj":"T2139"},{"id":"R1808","pred":"arg1Of","subj":"T2144","obj":"T2140"},{"id":"R1809","pred":"arg1Of","subj":"T2144","obj":"T2141"},{"id":"R1810","pred":"arg1Of","subj":"T2144","obj":"T2142"},{"id":"R1815","pred":"arg1Of","subj":"T2144","obj":"T2143"},{"id":"R1816","pred":"arg1Of","subj":"T2144","obj":"T2145"},{"id":"R1820","pred":"arg2Of","subj":"T2147","obj":"T2145"},{"id":"R1823","pred":"arg1Of","subj":"T2147","obj":"T2146"},{"id":"R1824","pred":"arg1Of","subj":"T2147","obj":"T2148"},{"id":"R1825","pred":"arg1Of","subj":"T2147","obj":"T2149"},{"id":"R1826","pred":"arg1Of","subj":"T2152","obj":"T2150"},{"id":"R1827","pred":"arg1Of","subj":"T2152","obj":"T2151"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1610","span":{"begin":5,"end":7},"obj":"IN"},{"id":"T1611","span":{"begin":8,"end":22},"obj":"JJ"},{"id":"T1612","span":{"begin":23,"end":28},"obj":"NNS"},{"id":"T1613","span":{"begin":28,"end":29},"obj":"."},{"id":"T1614","span":{"begin":30,"end":39},"obj":"RB"},{"id":"T1615","span":{"begin":39,"end":40},"obj":","},{"id":"T1616","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T1617","span":{"begin":45,"end":49},"obj":"NNP"},{"id":"T1618","span":{"begin":50,"end":53},"obj":"CC"},{"id":"T1619","span":{"begin":54,"end":58},"obj":"NN"},{"id":"T1620","span":{"begin":59,"end":65},"obj":"VBN"},{"id":"T1621","span":{"begin":66,"end":76},"obj":"NN"},{"id":"T1622","span":{"begin":77,"end":79},"obj":"IN"},{"id":"T1623","span":{"begin":80,"end":88},"obj":"NN"},{"id":"T1624","span":{"begin":89,"end":100},"obj":"NNS"},{"id":"T1625","span":{"begin":101,"end":105},"obj":"IN"},{"id":"T1626","span":{"begin":106,"end":109},"obj":"DT"},{"id":"T1627","span":{"begin":110,"end":124},"obj":"NN"},{"id":"T1628","span":{"begin":125,"end":132},"obj":"NN"},{"id":"T1629","span":{"begin":133,"end":138},"obj":"JJ"},{"id":"T1630","span":{"begin":139,"end":144},"obj":"NN"},{"id":"T1631","span":{"begin":145,"end":150},"obj":"NN"},{"id":"T1632","span":{"begin":150,"end":151},"obj":","},{"id":"T1633","span":{"begin":152,"end":154},"obj":"DT"},{"id":"T1634","span":{"begin":155,"end":160},"obj":"NN"},{"id":"T1635","span":{"begin":161,"end":165},"obj":"WDT"},{"id":"T1636","span":{"begin":166,"end":174},"obj":"VBZ"},{"id":"T1637","span":{"begin":175,"end":189},"obj":"NN"},{"id":"T1638","span":{"begin":190,"end":194},"obj":"NN"},{"id":"T1639","span":{"begin":195,"end":208},"obj":"NN"}],"relations":[{"id":"R1229","pred":"amod","subj":"T1611","obj":"T1612"},{"id":"R1230","pred":"pobj","subj":"T1612","obj":"T1610"},{"id":"R1232","pred":"advmod","subj":"T1614","obj":"T1620"},{"id":"R1233","pred":"punct","subj":"T1615","obj":"T1620"},{"id":"R1234","pred":"det","subj":"T1616","obj":"T1617"},{"id":"R1235","pred":"nsubj","subj":"T1617","obj":"T1620"},{"id":"R1236","pred":"cc","subj":"T1618","obj":"T1617"},{"id":"R1237","pred":"conj","subj":"T1619","obj":"T1617"},{"id":"R1238","pred":"ROOT","subj":"T1620","obj":"T1620"},{"id":"R1239","pred":"dobj","subj":"T1621","obj":"T1620"},{"id":"R1240","pred":"prep","subj":"T1622","obj":"T1621"},{"id":"R1241","pred":"compound","subj":"T1623","obj":"T1624"},{"id":"R1242","pred":"pobj","subj":"T1624","obj":"T1622"},{"id":"R1243","pred":"prep","subj":"T1625","obj":"T1624"},{"id":"R1244","pred":"det","subj":"T1626","obj":"T1631"},{"id":"R1245","pred":"amod","subj":"T1627","obj":"T1631"},{"id":"R1246","pred":"amod","subj":"T1628","obj":"T1631"},{"id":"R1247","pred":"amod","subj":"T1629","obj":"T1631"},{"id":"R1248","pred":"compound","subj":"T1630","obj":"T1631"},{"id":"R1249","pred":"pobj","subj":"T1631","obj":"T1625"},{"id":"R1250","pred":"punct","subj":"T1632","obj":"T1620"},{"id":"R1251","pred":"det","subj":"T1633","obj":"T1634"},{"id":"R1252","pred":"npadvmod","subj":"T1634","obj":"T1620"},{"id":"R1253","pred":"nsubj","subj":"T1635","obj":"T1636"},{"id":"R1254","pred":"relcl","subj":"T1636","obj":"T1634"},{"id":"R1255","pred":"compound","subj":"T1637","obj":"T1639"},{"id":"R1256","pred":"compound","subj":"T1638","obj":"T1639"},{"id":"R1257","pred":"dobj","subj":"T1639","obj":"T1636"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T2405","span":{"begin":110,"end":124},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T2406","span":{"begin":175,"end":189},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T2407","span":{"begin":54,"end":58},"obj":"http://purl.obolibrary.org/obo/GO_0005136"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T2418","span":{"begin":23,"end":28},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2281","span":{"begin":8,"end":12},"obj":"Q96EP0"},{"id":"T2282","span":{"begin":45,"end":49},"obj":"P25942"},{"id":"T2283","span":{"begin":54,"end":58},"obj":"P05112"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}

    test2

    {"project":"test2","denotations":[{"id":"T1095","span":{"begin":8,"end":12},"obj":"Protein"},{"id":"T1096","span":{"begin":13,"end":22},"obj":"Negative_regulation"},{"id":"T1097","span":{"begin":45,"end":49},"obj":"Protein"},{"id":"T1098","span":{"begin":54,"end":58},"obj":"Protein"},{"id":"T1099","span":{"begin":66,"end":76},"obj":"Gene_expression"}],"relations":[{"id":"R769","pred":"themeOf","subj":"T1095","obj":"T1096"}],"text":"tive in HOIP-deficient cells. Similarly, the CD40 and IL-4 driven production of germline transcripts from the immunoglobulin epsilon heavy chain locus, an event that precedes immunoglobulin gene rearrangement an"}