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PMC:3148254 / 4181-4392 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1166 8-12 Protein denotes HOIP
T1167 13-22 Negative_regulation denotes deficient
T1168 45-49 Protein denotes CD40
T1169 54-58 Protein denotes IL-4
R811 T1166 T1167 themeOf HOIP,deficient

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2619 45-49 Protein denotes CD40
T2620 54-58 Protein denotes IL-4
T2621 110-150 Protein denotes immunoglobulin epsilon heavy chain locus
T2622 175-194 Protein denotes immunoglobulin gene
T2623 66-76 Gene_expression denotes production
T2624 66-76 Gene_expression denotes production
T2625 66-76 Gene_expression denotes production
R1982 T2619 T2623 themeOf CD40,production
R1983 T2620 T2624 themeOf IL-4,production
R1985 T2621 T2625 themeOf immunoglobulin epsilon heavy chain locus,production

events-check-again

Id Subject Object Predicate Lexical cue
T2695 8-12 Protein denotes HOIP
T2696 13-22 Negative_regulation denotes deficient
T2697 45-49 Protein denotes CD40
T2698 54-58 Protein denotes IL-4
R2048 T2695 T2696 themeOf HOIP,deficient

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2124 5-7 IN denotes in
T2125 8-22 JJ denotes HOIP-deficient
T2126 23-28 NN denotes cells
T2127 30-39 RB denotes Similarly
T2128 39-40 -COMMA- denotes ,
T2129 41-44 DT denotes the
T2130 45-49 NN denotes CD40
T2131 50-53 CC denotes and
T2132 54-58 NN denotes IL-4
T2133 59-65 JJ denotes driven
T2134 66-76 NN denotes production
T2135 77-79 IN denotes of
T2136 80-88 NN denotes germline
T2137 89-100 NN denotes transcripts
T2138 101-105 IN denotes from
T2139 106-109 DT denotes the
T2140 110-124 NN denotes immunoglobulin
T2141 125-132 NN denotes epsilon
T2142 133-138 JJ denotes heavy
T2143 139-144 NN denotes chain
T2144 145-150 NN denotes locus
T2145 150-151 -COMMA- denotes ,
T2146 152-154 DT denotes an
T2147 155-160 NN denotes event
T2148 161-165 WDT denotes that
T2149 166-174 VB denotes precedes
T2150 175-189 NN denotes immunoglobulin
T2151 190-194 NN denotes gene
T2152 195-208 NN denotes rearrangement
R1749 T2126 T2124 arg2Of cells,in
R1750 T2126 T2125 arg1Of cells,HOIP-deficient
R1752 T2130 T2131 arg1Of CD40,and
R1759 T2132 T2131 arg2Of IL-4,and
R1760 T2134 T2129 arg1Of production,the
R1761 T2134 T2130 arg1Of production,CD40
R1762 T2134 T2132 arg1Of production,IL-4
R1763 T2134 T2133 arg1Of production,driven
R1772 T2134 T2135 arg1Of production,of
R1778 T2137 T2135 arg2Of transcripts,of
R1788 T2137 T2136 arg1Of transcripts,germline
R1789 T2137 T2138 arg1Of transcripts,from
R1792 T2144 T2138 arg2Of locus,from
R1804 T2144 T2139 arg1Of locus,the
R1808 T2144 T2140 arg1Of locus,immunoglobulin
R1809 T2144 T2141 arg1Of locus,epsilon
R1810 T2144 T2142 arg1Of locus,heavy
R1815 T2144 T2143 arg1Of locus,chain
R1816 T2144 T2145 arg1Of locus,","
R1820 T2147 T2145 arg2Of event,","
R1823 T2147 T2146 arg1Of event,an
R1824 T2147 T2148 arg1Of event,that
R1825 T2147 T2149 arg1Of event,precedes
R1826 T2152 T2150 arg1Of rearrangement,immunoglobulin
R1827 T2152 T2151 arg1Of rearrangement,gene

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1610 5-7 IN denotes in
T1611 8-22 JJ denotes HOIP-deficient
T1612 23-28 NNS denotes cells
T1613 28-29 . denotes .
T1614 30-39 RB denotes Similarly
T1615 39-40 , denotes ,
T1616 41-44 DT denotes the
T1617 45-49 NNP denotes CD40
T1618 50-53 CC denotes and
T1619 54-58 NN denotes IL-4
T1620 59-65 VBN denotes driven
T1621 66-76 NN denotes production
T1622 77-79 IN denotes of
T1623 80-88 NN denotes germline
T1624 89-100 NNS denotes transcripts
T1625 101-105 IN denotes from
T1626 106-109 DT denotes the
T1627 110-124 NN denotes immunoglobulin
T1628 125-132 NN denotes epsilon
T1629 133-138 JJ denotes heavy
T1630 139-144 NN denotes chain
T1631 145-150 NN denotes locus
T1632 150-151 , denotes ,
T1633 152-154 DT denotes an
T1634 155-160 NN denotes event
T1635 161-165 WDT denotes that
T1636 166-174 VBZ denotes precedes
T1637 175-189 NN denotes immunoglobulin
T1638 190-194 NN denotes gene
T1639 195-208 NN denotes rearrangement
R1229 T1611 T1612 amod HOIP-deficient,cells
R1230 T1612 T1610 pobj cells,in
R1232 T1614 T1620 advmod Similarly,driven
R1233 T1615 T1620 punct ",",driven
R1234 T1616 T1617 det the,CD40
R1235 T1617 T1620 nsubj CD40,driven
R1236 T1618 T1617 cc and,CD40
R1237 T1619 T1617 conj IL-4,CD40
R1238 T1620 T1620 ROOT driven,driven
R1239 T1621 T1620 dobj production,driven
R1240 T1622 T1621 prep of,production
R1241 T1623 T1624 compound germline,transcripts
R1242 T1624 T1622 pobj transcripts,of
R1243 T1625 T1624 prep from,transcripts
R1244 T1626 T1631 det the,locus
R1245 T1627 T1631 amod immunoglobulin,locus
R1246 T1628 T1631 amod epsilon,locus
R1247 T1629 T1631 amod heavy,locus
R1248 T1630 T1631 compound chain,locus
R1249 T1631 T1625 pobj locus,from
R1250 T1632 T1620 punct ",",driven
R1251 T1633 T1634 det an,event
R1252 T1634 T1620 npadvmod event,driven
R1253 T1635 T1636 nsubj that,precedes
R1254 T1636 T1634 relcl precedes,event
R1255 T1637 T1639 compound immunoglobulin,rearrangement
R1256 T1638 T1639 compound gene,rearrangement
R1257 T1639 T1636 dobj rearrangement,precedes

GO-MF

Id Subject Object Predicate Lexical cue
T2405 110-124 http://purl.obolibrary.org/obo/GO_0003823 denotes immunoglobulin
T2406 175-189 http://purl.obolibrary.org/obo/GO_0003823 denotes immunoglobulin
T2407 54-58 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4

GO-CC

Id Subject Object Predicate Lexical cue
T2418 23-28 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2281 8-12 Q96EP0 denotes HOIP
T2282 45-49 P25942 denotes CD40
T2283 54-58 P05112 denotes IL-4

test2

Id Subject Object Predicate Lexical cue
T1095 8-12 Protein denotes HOIP
T1096 13-22 Negative_regulation denotes deficient
T1097 45-49 Protein denotes CD40
T1098 54-58 Protein denotes IL-4
T1099 66-76 Gene_expression denotes production
R769 T1095 T1096 themeOf HOIP,deficient