PMC:3148254 / 1627-1750 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3148254","sourcedb":"PMC","sourceid":"3148254","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3148254","text":" cells, potentially explaining the defect in NF-κB activation. Restoration of HOIP expression reversed the defects in cellu","tracks":[{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T116","span":{"begin":63,"end":74},"obj":"Positive_regulation"},{"id":"T117","span":{"begin":78,"end":82},"obj":"Protein"},{"id":"T118","span":{"begin":83,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R55","pred":"themeOf","subj":"T117","obj":"T118"},{"id":"R56","pred":"themeOf","subj":"T118","obj":"T116"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T116","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T117","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T118","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T935","span":{"begin":45,"end":50},"obj":"Protein"},{"id":"T937","span":{"begin":51,"end":61},"obj":"Positive_regulation"},{"id":"T938","span":{"begin":78,"end":82},"obj":"Protein"},{"id":"T939","span":{"begin":83,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R678","pred":"themeOf","subj":"T935","obj":"T937"},{"id":"R679","pred":"themeOf","subj":"T938","obj":"T939"}],"attributes":[{"subj":"T935","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T937","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T938","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T939","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"events-check-again","denotations":[{"id":"T976","span":{"begin":63,"end":74},"obj":"Positive_regulation"},{"id":"T977","span":{"begin":78,"end":82},"obj":"Protein"},{"id":"T978","span":{"begin":83,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R697","pred":"themeOf","subj":"T977","obj":"T978"},{"id":"R698","pred":"themeOf","subj":"T978","obj":"T976"}],"attributes":[{"subj":"T976","pred":"source","obj":"events-check-again"},{"subj":"T977","pred":"source","obj":"events-check-again"},{"subj":"T978","pred":"source","obj":"events-check-again"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T668","span":{"begin":1,"end":6},"obj":"NN"},{"id":"T669","span":{"begin":6,"end":7},"obj":"-COMMA-"},{"id":"T670","span":{"begin":8,"end":19},"obj":"RB"},{"id":"T671","span":{"begin":20,"end":30},"obj":"VB"},{"id":"T672","span":{"begin":31,"end":34},"obj":"DT"},{"id":"T674","span":{"begin":42,"end":44},"obj":"IN"},{"id":"T675","span":{"begin":45,"end":50},"obj":"NN"},{"id":"T676","span":{"begin":51,"end":61},"obj":"NN"},{"id":"T677","span":{"begin":63,"end":74},"obj":"NN"},{"id":"T678","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T679","span":{"begin":78,"end":82},"obj":"NN"},{"id":"T680","span":{"begin":83,"end":93},"obj":"NN"},{"id":"T681","span":{"begin":94,"end":102},"obj":"VB"},{"id":"T682","span":{"begin":103,"end":106},"obj":"DT"},{"id":"T683","span":{"begin":107,"end":114},"obj":"NN"},{"id":"T684","span":{"begin":115,"end":117},"obj":"IN"},{"id":"T673","span":{"begin":35,"end":41},"obj":"NN"}],"relations":[{"id":"R589","pred":"arg1Of","subj":"T671","obj":"T670"},{"id":"R590","pred":"arg2Of","subj":"T676","obj":"T674"},{"id":"R591","pred":"arg1Of","subj":"T676","obj":"T675"},{"id":"R592","pred":"arg1Of","subj":"T677","obj":"T678"},{"id":"R593","pred":"arg1Of","subj":"T677","obj":"T681"},{"id":"R594","pred":"arg2Of","subj":"T680","obj":"T678"},{"id":"R595","pred":"arg1Of","subj":"T680","obj":"T679"},{"id":"R596","pred":"arg2Of","subj":"T683","obj":"T681"},{"id":"R597","pred":"arg1Of","subj":"T683","obj":"T682"},{"id":"R598","pred":"arg1Of","subj":"T683","obj":"T684"},{"id":"R699","pred":"arg2Of","subj":"T673","obj":"T671"},{"id":"R700","pred":"arg1Of","subj":"T673","obj":"T672"},{"id":"R701","pred":"arg1Of","subj":"T673","obj":"T674"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T668","pred":"source","obj":"pmc-enju-pas"},{"subj":"T669","pred":"source","obj":"pmc-enju-pas"},{"subj":"T670","pred":"source","obj":"pmc-enju-pas"},{"subj":"T671","pred":"source","obj":"pmc-enju-pas"},{"subj":"T672","pred":"source","obj":"pmc-enju-pas"},{"subj":"T674","pred":"source","obj":"pmc-enju-pas"},{"subj":"T675","pred":"source","obj":"pmc-enju-pas"},{"subj":"T676","pred":"source","obj":"pmc-enju-pas"},{"subj":"T677","pred":"source","obj":"pmc-enju-pas"},{"subj":"T678","pred":"source","obj":"pmc-enju-pas"},{"subj":"T679","pred":"source","obj":"pmc-enju-pas"},{"subj":"T680","pred":"source","obj":"pmc-enju-pas"},{"subj":"T681","pred":"source","obj":"pmc-enju-pas"},{"subj":"T682","pred":"source","obj":"pmc-enju-pas"},{"subj":"T683","pred":"source","obj":"pmc-enju-pas"},{"subj":"T684","pred":"source","obj":"pmc-enju-pas"},{"subj":"T673","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T388","span":{"begin":1,"end":6},"obj":"NNS"},{"id":"T389","span":{"begin":6,"end":7},"obj":","},{"id":"T390","span":{"begin":8,"end":19},"obj":"RB"},{"id":"T391","span":{"begin":20,"end":30},"obj":"VBG"},{"id":"T392","span":{"begin":31,"end":34},"obj":"DT"},{"id":"T393","span":{"begin":35,"end":41},"obj":"NN"},{"id":"T394","span":{"begin":42,"end":44},"obj":"IN"},{"id":"T395","span":{"begin":45,"end":50},"obj":"JJ"},{"id":"T396","span":{"begin":51,"end":61},"obj":"NN"},{"id":"T397","span":{"begin":61,"end":62},"obj":"."},{"id":"T398","span":{"begin":63,"end":74},"obj":"NNP"},{"id":"T399","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T400","span":{"begin":78,"end":82},"obj":"NNP"},{"id":"T401","span":{"begin":83,"end":93},"obj":"NN"},{"id":"T402","span":{"begin":94,"end":102},"obj":"VBD"},{"id":"T403","span":{"begin":103,"end":106},"obj":"DT"},{"id":"T404","span":{"begin":107,"end":114},"obj":"NNS"},{"id":"T405","span":{"begin":115,"end":117},"obj":"IN"}],"relations":[{"id":"R312","pred":"advmod","subj":"T390","obj":"T391"},{"id":"R314","pred":"det","subj":"T392","obj":"T393"},{"id":"R315","pred":"dobj","subj":"T393","obj":"T391"},{"id":"R316","pred":"prep","subj":"T394","obj":"T393"},{"id":"R317","pred":"amod","subj":"T395","obj":"T396"},{"id":"R318","pred":"pobj","subj":"T396","obj":"T394"},{"id":"R320","pred":"nsubj","subj":"T398","obj":"T402"},{"id":"R321","pred":"prep","subj":"T399","obj":"T398"},{"id":"R322","pred":"compound","subj":"T400","obj":"T401"},{"id":"R323","pred":"pobj","subj":"T401","obj":"T399"},{"id":"R324","pred":"ROOT","subj":"T402","obj":"T402"},{"id":"R325","pred":"det","subj":"T403","obj":"T404"},{"id":"R326","pred":"dobj","subj":"T404","obj":"T402"},{"id":"R327","pred":"prep","subj":"T405","obj":"T404"}],"attributes":[{"subj":"T388","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T389","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T390","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T391","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T392","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T393","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T394","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T395","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T396","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T397","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T398","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T399","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T400","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T401","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T402","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T403","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T404","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T405","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T781","span":{"begin":45,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0051092"}],"attributes":[{"subj":"T781","pred":"source","obj":"GO-BP"}]},{"project":"GO-CC","denotations":[{"id":"T805","span":{"begin":1,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T805","pred":"source","obj":"GO-CC"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T737","span":{"begin":78,"end":82},"obj":"Q96EP0"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T737","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T77","span":{"begin":78,"end":82},"obj":"Protein"},{"id":"T78","span":{"begin":83,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R37","pred":"themeOf","subj":"T77","obj":"T78"}],"attributes":[{"subj":"T77","pred":"source","obj":"test2"},{"subj":"T78","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference","color":"#ec93e9","default":true},{"id":"bionlp-st-ge-2016-reference-tees","color":"#93ecd4"},{"id":"events-check-again","color":"#ecba93"},{"id":"pmc-enju-pas","color":"#a093ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#9fec93"},{"id":"GO-BP","color":"#ec93b9"},{"id":"GO-CC","color":"#93d3ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ecea93"},{"id":"test2","color":"#d093ec"}]}]}}