PMC:3148254 / 1022-1273
Annnotations
bionlp-st-ge-2016-reference
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bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T911","span":{"begin":23,"end":27},"obj":"Protein"},{"id":"T912","span":{"begin":58,"end":62},"obj":"Protein"},{"id":"T913","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T914","span":{"begin":48,"end":54},"obj":"Entity"},{"id":"T919","span":{"begin":152,"end":156},"obj":"Protein"},{"id":"T920","span":{"begin":160,"end":164},"obj":"Protein"}],"relations":[{"id":"R663","pred":"partOf","subj":"T912","obj":"T914"}],"text":"L-interacting protein (HOIP) to the cytoplasmic domain of CD40, suggesting that HOIP has a role in the CD40 signaling pathway. To determine the role of HOIP in CD40 signaling, we used somatic cell gene targeting to generate mouse B cell lines deficien"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T957","span":{"begin":23,"end":27},"obj":"Protein"},{"id":"T958","span":{"begin":36,"end":54},"obj":"Entity"},{"id":"T959","span":{"begin":58,"end":62},"obj":"Protein"},{"id":"T960","span":{"begin":80,"end":84},"obj":"Protein"},{"id":"T961","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T962","span":{"begin":152,"end":156},"obj":"Protein"},{"id":"T963","span":{"begin":160,"end":164},"obj":"Protein"}],"relations":[{"id":"R688","pred":"partOf","subj":"T958","obj":"T959"}],"text":"L-interacting protein (HOIP) to the cytoplasmic domain of CD40, suggesting that HOIP has a role in the CD40 signaling pathway. To determine the role of HOIP in CD40 signaling, we used somatic cell gene targeting to generate mouse B cell lines deficien"}
pmc-enju-pas
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bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T289","span":{"begin":14,"end":21},"obj":"NN"},{"id":"T290","span":{"begin":22,"end":23},"obj":"-LRB-"},{"id":"T291","span":{"begin":23,"end":27},"obj":"NNP"},{"id":"T292","span":{"begin":27,"end":28},"obj":"-RRB-"},{"id":"T293","span":{"begin":29,"end":31},"obj":"TO"},{"id":"T294","span":{"begin":32,"end":35},"obj":"DT"},{"id":"T295","span":{"begin":36,"end":47},"obj":"JJ"},{"id":"T296","span":{"begin":48,"end":54},"obj":"NN"},{"id":"T297","span":{"begin":55,"end":57},"obj":"IN"},{"id":"T298","span":{"begin":58,"end":62},"obj":"NNP"},{"id":"T299","span":{"begin":62,"end":63},"obj":","},{"id":"T300","span":{"begin":64,"end":74},"obj":"VBG"},{"id":"T301","span":{"begin":75,"end":79},"obj":"IN"},{"id":"T302","span":{"begin":80,"end":84},"obj":"NNP"},{"id":"T303","span":{"begin":85,"end":88},"obj":"VBZ"},{"id":"T304","span":{"begin":89,"end":90},"obj":"DT"},{"id":"T305","span":{"begin":91,"end":95},"obj":"NN"},{"id":"T306","span":{"begin":96,"end":98},"obj":"IN"},{"id":"T307","span":{"begin":99,"end":102},"obj":"DT"},{"id":"T308","span":{"begin":103,"end":107},"obj":"NNP"},{"id":"T309","span":{"begin":108,"end":117},"obj":"VBG"},{"id":"T310","span":{"begin":118,"end":125},"obj":"NN"},{"id":"T311","span":{"begin":125,"end":126},"obj":"."},{"id":"T312","span":{"begin":127,"end":129},"obj":"TO"},{"id":"T313","span":{"begin":130,"end":139},"obj":"VB"},{"id":"T314","span":{"begin":140,"end":143},"obj":"DT"},{"id":"T315","span":{"begin":144,"end":148},"obj":"NN"},{"id":"T316","span":{"begin":149,"end":151},"obj":"IN"},{"id":"T317","span":{"begin":152,"end":156},"obj":"NNP"},{"id":"T318","span":{"begin":157,"end":159},"obj":"IN"},{"id":"T319","span":{"begin":160,"end":164},"obj":"NNP"},{"id":"T320","span":{"begin":165,"end":174},"obj":"VBG"},{"id":"T321","span":{"begin":174,"end":175},"obj":","},{"id":"T322","span":{"begin":176,"end":178},"obj":"PRP"},{"id":"T323","span":{"begin":179,"end":183},"obj":"VBD"},{"id":"T324","span":{"begin":184,"end":191},"obj":"JJ"},{"id":"T325","span":{"begin":192,"end":196},"obj":"NN"},{"id":"T326","span":{"begin":197,"end":201},"obj":"NN"},{"id":"T327","span":{"begin":202,"end":211},"obj":"VBG"},{"id":"T328","span":{"begin":212,"end":214},"obj":"TO"},{"id":"T329","span":{"begin":215,"end":223},"obj":"VB"},{"id":"T330","span":{"begin":224,"end":229},"obj":"NN"},{"id":"T331","span":{"begin":230,"end":231},"obj":"NNP"},{"id":"T332","span":{"begin":232,"end":236},"obj":"NN"},{"id":"T333","span":{"begin":237,"end":242},"obj":"NNS"}],"relations":[{"id":"R212","pred":"punct","subj":"T290","obj":"T291"},{"id":"R213","pred":"appos","subj":"T291","obj":"T289"},{"id":"R216","pred":"det","subj":"T294","obj":"T296"},{"id":"R217","pred":"amod","subj":"T295","obj":"T296"},{"id":"R218","pred":"pobj","subj":"T296","obj":"T293"},{"id":"R219","pred":"prep","subj":"T297","obj":"T296"},{"id":"R220","pred":"pobj","subj":"T298","obj":"T297"},{"id":"R223","pred":"mark","subj":"T301","obj":"T303"},{"id":"R224","pred":"nsubj","subj":"T302","obj":"T303"},{"id":"R225","pred":"ccomp","subj":"T303","obj":"T300"},{"id":"R226","pred":"det","subj":"T304","obj":"T305"},{"id":"R227","pred":"dobj","subj":"T305","obj":"T303"},{"id":"R228","pred":"prep","subj":"T306","obj":"T305"},{"id":"R229","pred":"det","subj":"T307","obj":"T310"},{"id":"R230","pred":"nmod","subj":"T308","obj":"T310"},{"id":"R231","pred":"amod","subj":"T309","obj":"T310"},{"id":"R232","pred":"pobj","subj":"T310","obj":"T306"},{"id":"R234","pred":"aux","subj":"T312","obj":"T313"},{"id":"R235","pred":"advcl","subj":"T313","obj":"T323"},{"id":"R236","pred":"det","subj":"T314","obj":"T315"},{"id":"R237","pred":"dobj","subj":"T315","obj":"T313"},{"id":"R238","pred":"prep","subj":"T316","obj":"T315"},{"id":"R239","pred":"pobj","subj":"T317","obj":"T316"},{"id":"R240","pred":"prep","subj":"T318","obj":"T315"},{"id":"R241","pred":"pobj","subj":"T319","obj":"T318"},{"id":"R242","pred":"acl","subj":"T320","obj":"T315"},{"id":"R243","pred":"punct","subj":"T321","obj":"T323"},{"id":"R244","pred":"nsubj","subj":"T322","obj":"T323"},{"id":"R245","pred":"ROOT","subj":"T323","obj":"T323"},{"id":"R246","pred":"compound","subj":"T324","obj":"T326"},{"id":"R247","pred":"compound","subj":"T325","obj":"T326"},{"id":"R248","pred":"dobj","subj":"T326","obj":"T323"},{"id":"R249","pred":"acl","subj":"T327","obj":"T326"},{"id":"R250","pred":"aux","subj":"T328","obj":"T329"},{"id":"R251","pred":"xcomp","subj":"T329","obj":"T327"},{"id":"R252","pred":"compound","subj":"T330","obj":"T333"},{"id":"R253","pred":"compound","subj":"T331","obj":"T332"},{"id":"R254","pred":"compound","subj":"T332","obj":"T333"},{"id":"R255","pred":"dobj","subj":"T333","obj":"T329"}],"text":"L-interacting protein (HOIP) to the cytoplasmic domain of CD40, suggesting that HOIP has a role in the CD40 signaling pathway. To determine the role of HOIP in CD40 signaling, we used somatic cell gene targeting to generate mouse B cell lines deficien"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T761","span":{"begin":108,"end":117},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T762","span":{"begin":165,"end":174},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T786","span":{"begin":103,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_0023035"},{"id":"T788","span":{"begin":103,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_2000348"},{"id":"T790","span":{"begin":108,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_0007165"}],"text":"L-interacting protein (HOIP) to the cytoplasmic domain of CD40, suggesting that HOIP has a role in the CD40 signaling pathway. To determine the role of HOIP in CD40 signaling, we used somatic cell gene targeting to generate mouse B cell lines deficien"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T802","span":{"begin":192,"end":196},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T803","span":{"begin":232,"end":236},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"L-interacting protein (HOIP) to the cytoplasmic domain of CD40, suggesting that HOIP has a role in the CD40 signaling pathway. To determine the role of HOIP in CD40 signaling, we used somatic cell gene targeting to generate mouse B cell lines deficien"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T720","span":{"begin":23,"end":27},"obj":"Q96EP0"},{"id":"T721","span":{"begin":58,"end":62},"obj":"P25942"},{"id":"T722","span":{"begin":80,"end":84},"obj":"Q96EP0"},{"id":"T723","span":{"begin":103,"end":107},"obj":"P25942"},{"id":"T724","span":{"begin":152,"end":156},"obj":"Q96EP0"},{"id":"T725","span":{"begin":160,"end":164},"obj":"P25942"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"L-interacting protein (HOIP) to the cytoplasmic domain of CD40, suggesting that HOIP has a role in the CD40 signaling pathway. To determine the role of HOIP in CD40 signaling, we used somatic cell gene targeting to generate mouse B cell lines deficien"}
test2
{"project":"test2","denotations":[{"id":"T57","span":{"begin":23,"end":27},"obj":"Protein"},{"id":"T58","span":{"begin":36,"end":54},"obj":"Entity"},{"id":"T59","span":{"begin":58,"end":62},"obj":"Protein"},{"id":"T60","span":{"begin":80,"end":84},"obj":"Protein"},{"id":"T61","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T62","span":{"begin":152,"end":156},"obj":"Protein"},{"id":"T63","span":{"begin":160,"end":164},"obj":"Protein"}],"relations":[{"id":"R29","pred":"partOf","subj":"T58","obj":"T59"}],"text":"L-interacting protein (HOIP) to the cytoplasmic domain of CD40, suggesting that HOIP has a role in the CD40 signaling pathway. To determine the role of HOIP in CD40 signaling, we used somatic cell gene targeting to generate mouse B cell lines deficien"}