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PMC:314463 / 41878-42248 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T8596 0-370 sentence denotes Consistent with this relationship, the three genes are expressed in partially overlapping patterns that include anterior somites (Tbx18 and Tbx22), limb mesenchyme (Tbx15 and Tbx18), and craniofacial mesenchyme (all three genes, Tbx15 more broadly than Tbx18 or Tbx22) (Agulnik et al. 1998; Kraus et al. 2001; Braybrook et al. 2002; Bush et al. 2002; Herr et al. 2003).
T8597 1-11 JJ denotes Consistent
T8598 56-65 VBN denotes expressed
T8599 12-16 IN denotes with
T8600 17-21 DT denotes this
T8601 22-34 NN denotes relationship
T8602 34-36 , denotes ,
T8603 36-39 DT denotes the
T8604 46-51 NNS denotes genes
T8605 40-45 CD denotes three
T8606 52-55 VBP denotes are
T8607 66-68 IN denotes in
T8608 69-78 RB denotes partially
T8609 79-90 VBG denotes overlapping
T8610 91-99 NNS denotes patterns
T8611 100-104 WDT denotes that
T8612 105-112 VBP denotes include
T8613 113-121 JJ denotes anterior
T8614 122-129 NNS denotes somites
T8615 130-131 -LRB- denotes (
T8616 131-136 NN denotes Tbx18
T8617 137-140 CC denotes and
T8618 141-146 NN denotes Tbx22
T8619 146-147 -RRB- denotes )
T8620 147-149 , denotes ,
T8621 149-153 NN denotes limb
T8622 154-164 NN denotes mesenchyme
T8623 165-166 -LRB- denotes (
T8624 166-171 NN denotes Tbx15
T8625 172-175 CC denotes and
T8626 176-181 NN denotes Tbx18
T8627 181-182 -RRB- denotes )
T8628 182-184 , denotes ,
T8629 184-187 CC denotes and
T8630 188-200 JJ denotes craniofacial
T8631 201-211 NN denotes mesenchyme
T8632 212-213 -LRB- denotes (
T8633 223-228 NNS denotes genes
T8634 213-216 DT denotes all
T8635 217-222 CD denotes three
T8636 228-230 , denotes ,
T8637 230-235 NN denotes Tbx15
T8638 236-240 RBR denotes more
T8639 241-248 RB denotes broadly
T8640 249-253 IN denotes than
T8641 254-259 NN denotes Tbx18
T8642 260-262 CC denotes or
T8643 263-268 NN denotes Tbx22
T8644 268-269 -RRB- denotes )
T8645 270-271 -LRB- denotes (
T8646 271-278 NNP denotes Agulnik
T8647 279-281 FW denotes et
T8648 282-285 FW denotes al.
T8649 286-290 CD denotes 1998
T8650 290-291 : denotes ;
T8651 292-297 NNP denotes Kraus
T8652 298-300 FW denotes et
T8653 301-304 FW denotes al.
T8654 305-309 CD denotes 2001
T8655 309-310 : denotes ;
T8656 311-320 NNP denotes Braybrook
T8657 321-323 FW denotes et
T8658 324-327 FW denotes al.
T8659 328-332 CD denotes 2002
T8660 332-333 : denotes ;
T8661 334-338 NNP denotes Bush
T8662 339-341 FW denotes et
T8663 342-345 FW denotes al.
T8664 346-350 CD denotes 2002
T8665 350-351 : denotes ;
T8666 352-356 NNP denotes Herr
T8667 357-359 FW denotes et
T8668 360-363 FW denotes al.
T8669 364-368 CD denotes 2003
T8670 368-369 -RRB- denotes )
T8671 369-370 . denotes .
R5882 T8597 T8598 advcl Consistent,expressed
R5883 T8599 T8597 prep with,Consistent
R5884 T8600 T8601 det this,relationship
R5885 T8601 T8599 pobj relationship,with
R5886 T8602 T8598 punct ", ",expressed
R5887 T8603 T8604 det the,genes
R5888 T8604 T8598 nsubjpass genes,expressed
R5889 T8605 T8604 nummod three,genes
R5890 T8606 T8598 auxpass are,expressed
R5891 T8607 T8598 prep in,expressed
R5892 T8608 T8609 advmod partially,overlapping
R5893 T8609 T8610 amod overlapping,patterns
R5894 T8610 T8607 pobj patterns,in
R5895 T8611 T8612 dep that,include
R5896 T8612 T8610 relcl include,patterns
R5897 T8613 T8614 amod anterior,somites
R5898 T8614 T8612 dobj somites,include
R5899 T8615 T8616 punct (,Tbx18
R5900 T8616 T8614 parataxis Tbx18,somites
R5901 T8617 T8616 cc and,Tbx18
R5902 T8618 T8616 conj Tbx22,Tbx18
R5903 T8619 T8616 punct ),Tbx18
R5904 T8620 T8614 punct ", ",somites
R5905 T8621 T8622 compound limb,mesenchyme
R5906 T8622 T8614 conj mesenchyme,somites
R5907 T8623 T8624 punct (,Tbx15
R5908 T8624 T8622 parataxis Tbx15,mesenchyme
R5909 T8625 T8624 cc and,Tbx15
R5910 T8626 T8624 conj Tbx18,Tbx15
R5911 T8627 T8624 punct ),Tbx15
R5912 T8628 T8622 punct ", ",mesenchyme
R5913 T8629 T8622 cc and,mesenchyme
R5914 T8630 T8631 amod craniofacial,mesenchyme
R5915 T8631 T8622 conj mesenchyme,mesenchyme
R5916 T8632 T8633 punct (,genes
R5917 T8633 T8631 parataxis genes,mesenchyme
R5918 T8634 T8633 det all,genes
R5919 T8635 T8633 nummod three,genes
R5920 T8636 T8633 punct ", ",genes
R5921 T8637 T8633 dep Tbx15,genes
R5922 T8638 T8639 advmod more,broadly
R5923 T8639 T8637 advmod broadly,Tbx15
R5924 T8640 T8639 prep than,broadly
R5925 T8641 T8640 pobj Tbx18,than
R5926 T8642 T8641 cc or,Tbx18
R5927 T8643 T8641 conj Tbx22,Tbx18
R5928 T8644 T8633 punct ),genes
R5929 T8645 T8646 punct (,Agulnik
R5930 T8646 T8612 meta Agulnik,include
R5931 T8647 T8646 nmod et,Agulnik
R5932 T8648 T8646 nmod al.,Agulnik
R5933 T8649 T8646 nummod 1998,Agulnik
R5934 T8650 T8646 punct ;,Agulnik
R5935 T8651 T8646 nmod Kraus,Agulnik
R5936 T8652 T8646 nmod et,Agulnik
R5937 T8653 T8646 nmod al.,Agulnik
R5938 T8654 T8646 nummod 2001,Agulnik
R5939 T8655 T8646 punct ;,Agulnik
R5940 T8656 T8646 nmod Braybrook,Agulnik
R5941 T8657 T8646 nmod et,Agulnik
R5942 T8658 T8646 nmod al.,Agulnik
R5943 T8659 T8646 nummod 2002,Agulnik
R5944 T8660 T8646 punct ;,Agulnik
R5945 T8661 T8646 nmod Bush,Agulnik
R5946 T8662 T8646 nmod et,Agulnik
R5947 T8663 T8646 nmod al.,Agulnik
R5948 T8664 T8646 nummod 2002,Agulnik
R5949 T8665 T8646 punct ;,Agulnik
R5950 T8666 T8646 nmod Herr,Agulnik
R5951 T8667 T8646 nmod et,Agulnik
R5952 T8668 T8646 nmod al.,Agulnik
R5953 T8669 T8646 nummod 2003,Agulnik
R5954 T8670 T8646 punct ),Agulnik
R5955 T8671 T8598 punct .,expressed

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8321 46-51 SO:0000704 denotes genes
T8322 56-65 GO:0010467 denotes expressed
T8323 122-129 UBERON:0002329 denotes somites
T8324 131-136 PR:000016146 denotes Tbx18
T8325 141-146 PR:000016150 denotes Tbx22
T8326 149-164 UBERON:0009749 denotes limb mesenchyme
T8327 166-171 PR:000016145 denotes Tbx15
T8328 176-181 PR:000016146 denotes Tbx18
T8329 201-211 UBERON:0003104 denotes mesenchyme
T8330 223-228 SO:0000704 denotes genes
T8331 230-235 PR:000016145 denotes Tbx15
T8332 254-259 PR:000016146 denotes Tbx18
T8333 263-268 PR:000016150 denotes Tbx22

2_test

Id Subject Object Predicate Lexical cue
14737183-9693034-84903019 286-290 9693034 denotes 1998
14737183-11118889-84903020 305-309 11118889 denotes 2001
14737183-12374769-84903021 328-332 12374769 denotes 2002
14737183-12412015-84903022 346-350 12412015 denotes 2002
14737183-12666195-84903023 364-368 12666195 denotes 2003
T4817 286-290 9693034 denotes 1998
T78537 305-309 11118889 denotes 2001
T43597 328-332 12374769 denotes 2002
T38490 346-350 12412015 denotes 2002
T88434 364-368 12666195 denotes 2003

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8415 46-51 SO_EXT:0000704 denotes genes
T8416 56-65 GO:0010467 denotes expressed
T8417 122-129 UBERON:0002329 denotes somites
T8418 131-136 PR_EXT:000016146 denotes Tbx18
T8419 141-146 PR_EXT:000016150 denotes Tbx22
T8420 149-164 UBERON:0009749 denotes limb mesenchyme
T8421 166-171 PR_EXT:000016145 denotes Tbx15
T8422 176-181 PR_EXT:000016146 denotes Tbx18
T8423 188-200 UBERON_EXT:face_or_skull denotes craniofacial
T8424 201-211 UBERON:0003104 denotes mesenchyme
T8425 223-228 SO_EXT:0000704 denotes genes
T8426 230-235 PR_EXT:000016145 denotes Tbx15
T8427 254-259 PR_EXT:000016146 denotes Tbx18
T8428 263-268 PR_EXT:000016150 denotes Tbx22