> top > docs > PMC:314463 > spans > 35818-36753 > annotations

PMC:314463 / 35818-36753 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T7284 0-7 IN denotes Because
T7285 34-38 VBZ denotes lies
T7286 8-11 DT denotes the
T7287 25-33 NN denotes boundary
T7288 12-24 NN denotes pigmentation
T7289 103-111 VBD denotes wondered
T7290 39-41 IN denotes in
T7291 42-50 NN denotes register
T7292 51-55 IN denotes with
T7293 56-59 DT denotes the
T7294 75-83 NN denotes junction
T7295 60-64 NN denotes limb
T7296 64-65 HYPH denotes –
T7297 65-69 NN denotes body
T7298 70-74 NN denotes wall
T7299 84-85 -LRB- denotes (
T7300 85-88 VB denotes see
T7301 89-95 NN denotes Figure
T7302 96-97 CD denotes 2
T7303 97-98 -RRB- denotes )
T7304 98-100 , denotes ,
T7305 100-102 PRP denotes we
T7306 112-119 IN denotes whether
T7307 175-177 VB denotes be
T7308 120-130 NNS denotes mechanisms
T7309 131-135 VBN denotes used
T7310 136-139 IN denotes for
T7311 140-152 JJ denotes dorsoventral
T7312 158-168 NN denotes patterning
T7313 153-157 NN denotes limb
T7314 169-174 MD denotes might
T7315 178-185 JJ denotes related
T7316 186-188 IN denotes to
T7317 189-194 DT denotes those
T7318 195-199 VBN denotes used
T7319 200-202 TO denotes to
T7320 203-212 VB denotes establish
T7321 213-216 DT denotes the
T7322 230-238 NN denotes boundary
T7323 217-229 NN denotes pigmentation
T7324 238-239 . denotes .
T7325 239-429 sentence denotes In the developing limb, Engrailed1 (En1), Wnt7a, and Lmx1b are part of a network whose restricted domains of expression help to establish dorsoventral identity (reviewed in Niswander 2003).
T7326 240-242 IN denotes In
T7327 299-302 VBP denotes are
T7328 243-246 DT denotes the
T7329 258-262 NN denotes limb
T7330 247-257 VBG denotes developing
T7331 262-264 , denotes ,
T7332 264-274 NN denotes Engrailed1
T7333 275-276 -LRB- denotes (
T7334 276-279 NN denotes En1
T7335 279-280 -RRB- denotes )
T7336 280-282 , denotes ,
T7337 282-287 NN denotes Wnt7a
T7338 287-289 , denotes ,
T7339 289-292 CC denotes and
T7340 293-298 NN denotes Lmx1b
T7341 303-307 NN denotes part
T7342 308-310 IN denotes of
T7343 311-312 DT denotes a
T7344 313-320 NN denotes network
T7345 321-326 WP$ denotes whose
T7346 338-345 NNS denotes domains
T7347 327-337 JJ denotes restricted
T7348 360-364 VBP denotes help
T7349 346-348 IN denotes of
T7350 349-359 NN denotes expression
T7351 365-367 TO denotes to
T7352 368-377 VB denotes establish
T7353 378-390 JJ denotes dorsoventral
T7354 391-399 NN denotes identity
T7355 400-401 -LRB- denotes (
T7356 401-409 VBN denotes reviewed
T7357 410-412 IN denotes in
T7358 413-422 NNP denotes Niswander
T7359 423-427 CD denotes 2003
T7360 427-428 -RRB- denotes )
T7361 428-429 . denotes .
T7362 429-624 sentence denotes En1 is transiently expressed in the developing flank; at E11.5, transverse abdominal sections reveal domains in the neural tube, somite-derived mesenchyme, and the ventral body wall (Figure 8C).
T7363 430-433 NN denotes En1
T7364 449-458 VBN denotes expressed
T7365 434-436 VBZ denotes is
T7366 437-448 RB denotes transiently
T7367 524-530 VBP denotes reveal
T7368 459-461 IN denotes in
T7369 462-465 DT denotes the
T7370 477-482 NN denotes flank
T7371 466-476 VBG denotes developing
T7372 482-483 : denotes ;
T7373 484-486 IN denotes at
T7374 487-492 NN denotes E11.5
T7375 492-494 , denotes ,
T7376 494-504 JJ denotes transverse
T7377 515-523 NNS denotes sections
T7378 505-514 JJ denotes abdominal
T7379 531-538 NNS denotes domains
T7380 539-541 IN denotes in
T7381 542-545 DT denotes the
T7382 553-557 NN denotes tube
T7383 546-552 JJ denotes neural
T7384 557-559 , denotes ,
T7385 559-565 NN denotes somite
T7386 566-573 VBN denotes derived
T7387 565-566 HYPH denotes -
T7388 574-584 NN denotes mesenchyme
T7389 584-586 , denotes ,
T7390 586-589 CC denotes and
T7391 590-593 DT denotes the
T7392 607-611 NN denotes wall
T7393 594-601 JJ denotes ventral
T7394 602-606 NN denotes body
T7395 612-613 -LRB- denotes (
T7396 613-619 NN denotes Figure
T7397 620-622 CD denotes 8C
T7398 622-623 -RRB- denotes )
T7399 623-624 . denotes .
T7400 624-935 sentence denotes An adjacent section hybridized with Tbx15 reveals a complementary pattern in the flank, which provides additional evidence for developmental mechanisms that establish a pigmentation boundary entirely within lateral plate mesoderm and independent of lineage restrictions imposed by the lateral somitic frontier.
T7401 625-627 DT denotes An
T7402 637-644 NN denotes section
T7403 628-636 JJ denotes adjacent
T7404 667-674 VBZ denotes reveals
T7405 645-655 VBN denotes hybridized
T7406 656-660 IN denotes with
T7407 661-666 NN denotes Tbx15
T7408 675-676 DT denotes a
T7409 691-698 NN denotes pattern
T7410 677-690 JJ denotes complementary
T7411 699-701 IN denotes in
T7412 702-705 DT denotes the
T7413 706-711 NN denotes flank
T7414 711-713 , denotes ,
T7415 713-718 WDT denotes which
T7416 719-727 VBZ denotes provides
T7417 728-738 JJ denotes additional
T7418 739-747 NN denotes evidence
T7419 748-751 IN denotes for
T7420 752-765 JJ denotes developmental
T7421 766-776 NNS denotes mechanisms
T7422 777-781 WDT denotes that
T7423 782-791 VBP denotes establish
T7424 792-793 DT denotes a
T7425 807-815 NN denotes boundary
T7426 794-806 NN denotes pigmentation
T7427 816-824 RB denotes entirely
T7428 825-831 IN denotes within
T7429 832-839 JJ denotes lateral
T7430 840-845 NN denotes plate
T7431 846-854 NN denotes mesoderm
T7432 855-858 CC denotes and
T7433 859-870 JJ denotes independent
T7434 871-873 IN denotes of
T7435 874-881 NN denotes lineage
T7436 882-894 NNS denotes restrictions
T7437 895-902 VBN denotes imposed
T7438 903-905 IN denotes by
T7439 906-909 DT denotes the
T7440 926-934 NN denotes frontier
T7441 910-917 JJ denotes lateral
T7442 918-925 JJ denotes somitic
T7443 934-935 . denotes .
R5057 T7284 T7285 mark Because,lies
R5058 T7285 T7289 advcl lies,wondered
R5059 T7286 T7287 det the,boundary
R5060 T7287 T7285 nsubj boundary,lies
R5061 T7288 T7287 compound pigmentation,boundary
R5062 T7290 T7285 prep in,lies
R5063 T7291 T7290 pobj register,in
R5064 T7292 T7291 prep with,register
R5065 T7293 T7294 det the,junction
R5066 T7294 T7292 pobj junction,with
R5067 T7295 T7294 nmod limb,junction
R5068 T7296 T7295 punct –,limb
R5069 T7297 T7298 compound body,wall
R5070 T7298 T7295 appos wall,limb
R5071 T7299 T7300 punct (,see
R5072 T7300 T7285 parataxis see,lies
R5073 T7301 T7300 dobj Figure,see
R5074 T7302 T7301 nummod 2,Figure
R5075 T7303 T7300 punct ),see
R5076 T7304 T7289 punct ", ",wondered
R5077 T7305 T7289 nsubj we,wondered
R5078 T7306 T7307 mark whether,be
R5079 T7307 T7289 ccomp be,wondered
R5080 T7308 T7307 nsubj mechanisms,be
R5081 T7309 T7308 acl used,mechanisms
R5082 T7310 T7309 prep for,used
R5083 T7311 T7312 amod dorsoventral,patterning
R5084 T7312 T7310 pobj patterning,for
R5085 T7313 T7312 compound limb,patterning
R5086 T7314 T7307 aux might,be
R5087 T7315 T7307 acomp related,be
R5088 T7316 T7315 prep to,related
R5089 T7317 T7316 pobj those,to
R5090 T7318 T7317 acl used,those
R5091 T7319 T7320 aux to,establish
R5092 T7320 T7318 advcl establish,used
R5093 T7321 T7322 det the,boundary
R5094 T7322 T7320 dobj boundary,establish
R5095 T7323 T7322 compound pigmentation,boundary
R5096 T7324 T7289 punct .,wondered
R5097 T7326 T7327 prep In,are
R5098 T7328 T7329 det the,limb
R5099 T7329 T7326 pobj limb,In
R5100 T7330 T7329 amod developing,limb
R5101 T7331 T7327 punct ", ",are
R5102 T7332 T7327 nsubj Engrailed1,are
R5103 T7333 T7332 punct (,Engrailed1
R5104 T7334 T7332 appos En1,Engrailed1
R5105 T7335 T7332 punct ),Engrailed1
R5106 T7336 T7332 punct ", ",Engrailed1
R5107 T7337 T7332 conj Wnt7a,Engrailed1
R5108 T7338 T7337 punct ", ",Wnt7a
R5109 T7339 T7337 cc and,Wnt7a
R5110 T7340 T7337 conj Lmx1b,Wnt7a
R5111 T7341 T7327 attr part,are
R5112 T7342 T7341 prep of,part
R5113 T7343 T7344 det a,network
R5114 T7344 T7342 pobj network,of
R5115 T7345 T7346 poss whose,domains
R5116 T7346 T7348 dep domains,help
R5117 T7347 T7346 amod restricted,domains
R5118 T7348 T7344 relcl help,network
R5119 T7349 T7346 prep of,domains
R5120 T7350 T7349 pobj expression,of
R5121 T7351 T7352 aux to,establish
R5122 T7352 T7348 xcomp establish,help
R5123 T7353 T7354 amod dorsoventral,identity
R5124 T7354 T7352 dobj identity,establish
R5125 T7355 T7356 punct (,reviewed
R5126 T7356 T7352 parataxis reviewed,establish
R5127 T7357 T7356 prep in,reviewed
R5128 T7358 T7357 pobj Niswander,in
R5129 T7359 T7358 npadvmod 2003,Niswander
R5130 T7360 T7356 punct ),reviewed
R5131 T7361 T7327 punct .,are
R5132 T7363 T7364 nsubjpass En1,expressed
R5133 T7364 T7367 ccomp expressed,reveal
R5134 T7365 T7364 auxpass is,expressed
R5135 T7366 T7364 advmod transiently,expressed
R5136 T7368 T7364 prep in,expressed
R5137 T7369 T7370 det the,flank
R5138 T7370 T7368 pobj flank,in
R5139 T7371 T7370 amod developing,flank
R5140 T7372 T7367 punct ;,reveal
R5141 T7373 T7367 prep at,reveal
R5142 T7374 T7373 pobj E11.5,at
R5143 T7375 T7367 punct ", ",reveal
R5144 T7376 T7377 amod transverse,sections
R5145 T7377 T7367 nsubj sections,reveal
R5146 T7378 T7377 amod abdominal,sections
R5147 T7379 T7367 dobj domains,reveal
R5148 T7380 T7367 prep in,reveal
R5149 T7381 T7382 det the,tube
R5150 T7382 T7380 pobj tube,in
R5151 T7383 T7382 amod neural,tube
R5152 T7384 T7382 punct ", ",tube
R5153 T7385 T7386 npadvmod somite,derived
R5154 T7386 T7388 amod derived,mesenchyme
R5155 T7387 T7386 punct -,derived
R5156 T7388 T7382 conj mesenchyme,tube
R5157 T7389 T7388 punct ", ",mesenchyme
R5158 T7390 T7388 cc and,mesenchyme
R5159 T7391 T7392 det the,wall
R5160 T7392 T7388 conj wall,mesenchyme
R5161 T7393 T7392 amod ventral,wall
R5162 T7394 T7392 compound body,wall
R5163 T7395 T7396 punct (,Figure
R5164 T7396 T7367 parataxis Figure,reveal
R5165 T7397 T7396 nummod 8C,Figure
R5166 T7398 T7396 punct ),Figure
R5167 T7399 T7367 punct .,reveal
R5168 T7401 T7402 det An,section
R5169 T7402 T7404 nsubj section,reveals
R5170 T7403 T7402 amod adjacent,section
R5171 T7405 T7402 acl hybridized,section
R5172 T7406 T7405 prep with,hybridized
R5173 T7407 T7406 pobj Tbx15,with
R5174 T7408 T7409 det a,pattern
R5175 T7409 T7404 dobj pattern,reveals
R5176 T7410 T7409 amod complementary,pattern
R5177 T7411 T7409 prep in,pattern
R5178 T7412 T7413 det the,flank
R5179 T7413 T7411 pobj flank,in
R5180 T7414 T7409 punct ", ",pattern
R5181 T7415 T7416 dep which,provides
R5182 T7416 T7409 relcl provides,pattern
R5183 T7417 T7418 amod additional,evidence
R5184 T7418 T7416 dobj evidence,provides
R5185 T7419 T7418 prep for,evidence
R5186 T7420 T7421 amod developmental,mechanisms
R5187 T7421 T7419 pobj mechanisms,for
R5188 T7422 T7423 dep that,establish
R5189 T7423 T7421 relcl establish,mechanisms
R5190 T7424 T7425 det a,boundary
R5191 T7425 T7423 dobj boundary,establish
R5192 T7426 T7425 compound pigmentation,boundary
R5193 T7427 T7428 advmod entirely,within
R5194 T7428 T7425 prep within,boundary
R5195 T7429 T7430 amod lateral,plate
R5196 T7430 T7431 compound plate,mesoderm
R5197 T7431 T7428 pobj mesoderm,within
R5198 T7432 T7428 cc and,within
R5199 T7433 T7428 conj independent,within
R5200 T7434 T7433 prep of,independent
R5201 T7435 T7436 compound lineage,restrictions
R5202 T7436 T7434 pobj restrictions,of
R5203 T7437 T7436 acl imposed,restrictions
R5204 T7438 T7437 agent by,imposed
R5205 T7439 T7440 det the,frontier
R5206 T7440 T7438 pobj frontier,by
R5207 T7441 T7440 amod lateral,frontier
R5208 T7442 T7440 amod somitic,frontier
R5209 T7443 T7404 punct .,reveals

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6778 60-64 UBERON:0002101 denotes limb
T6779 65-74 UBERON:0000309 denotes body wall
T6780 153-157 UBERON:0002101 denotes limb
T6781 258-262 UBERON:0002101 denotes limb
T6782 264-274 PR:000007070 denotes Engrailed1
T6783 276-279 PR:000007070 denotes En1
T6784 282-287 PR:000017448 denotes Wnt7a
T6785 293-298 PR:000009871 denotes Lmx1b
T6786 349-359 GO:0010467 denotes expression
T6787 430-433 PR:000007070 denotes En1
T6788 449-458 GO:0010467 denotes expressed
T6789 477-482 UBERON:0000180 denotes flank
T6790 505-514 UBERON:0000916 denotes abdominal
T6791 546-557 UBERON:0001049 denotes neural tube
T6792 559-584 UBERON:0003077 denotes somite-derived mesenchyme
T6793 594-611 UBERON:0017648 denotes ventral body wall
T6794 645-655 GO:0097617 denotes hybridized
T6795 661-666 PR:000016145 denotes Tbx15
T6796 706-711 UBERON:0000180 denotes flank
T6797 832-854 UBERON:0003081 denotes lateral plate mesoderm
T6798 918-934 UBERON:0015178 denotes somitic frontier

2_test

Id Subject Object Predicate Lexical cue
14737183-12560810-84903015 423-427 12560810 denotes 2003
T17681 423-427 12560810 denotes 2003

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6858 12-24 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T6859 60-64 UBERON:0002101 denotes limb
T6860 65-74 UBERON:0000309 denotes body wall
T6861 153-157 UBERON:0002101 denotes limb
T6862 158-168 GO_PATO_EXT:biological_patterning_process_or_quality denotes patterning
T6863 217-229 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T6864 258-262 UBERON:0002101 denotes limb
T6865 264-274 PR_EXT:000007070 denotes Engrailed1
T6866 276-279 PR_EXT:000007070 denotes En1
T6867 282-287 PR_EXT:000017448 denotes Wnt7a
T6868 293-298 PR_EXT:000009871 denotes Lmx1b
T6869 349-359 GO:0010467 denotes expression
T6870 430-433 PR_EXT:000007070 denotes En1
T6871 449-458 GO:0010467 denotes expressed
T6872 477-482 UBERON:0000180 denotes flank
T6873 505-514 UBERON:0000916 denotes abdominal
T6874 546-557 UBERON:0001049 denotes neural tube
T6875 559-584 UBERON:0003077 denotes somite-derived mesenchyme
T6876 594-611 UBERON:0017648 denotes ventral body wall
T6877 645-655 GO:0097617 denotes hybridized
T6878 661-666 PR_EXT:000016145 denotes Tbx15
T6879 706-711 UBERON:0000180 denotes flank
T6880 794-806 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T6881 832-854 UBERON:0003081 denotes lateral plate mesoderm
T6882 918-934 UBERON:0015178 denotes somitic frontier