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PMC:314463 / 21131-22266 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4774 0-1135 sentence denotes Figure 3 Molecular Genetics of deH and Tbx15 (A) Genetic and physical map, as described in the text. Markers M1 to M3 are SSCP markers generated from a BAC contig of the region; marker M4 is STS 16.MMHAP32FLF1 and was also used as an SSCP marker. M2 and M3, which flank the Tbx15 and M6pr-ps on the UCSC genome browser map and lie 634 kb apart, were nonrecombinant with deH in 2340 meioses. (B) The deH mutation is a deletion that starts in Tbx15 intron 1 and ends in the M6pr-ps. (C) Sequence of deletion breakpoints. (D) Diagram of Tbx15LacZ allele constructed by gene targeting. As described in the text, this allele is predicted to give rise to a protein truncated after approximately 154 codons and is lacking critical residues of the T box. Heterozygotes for the targeted allele exhibit normal size, morphology, and hair-color patterns, but homozygotes and Tbx15LacZ/deH compound heterozygotes are identical to deH homozygotes. Using sequence information from Agulnik et al. (1998) and the partially completed mouse genome sequence, we found that portions of several Tbx15 exons could not be amplified from deH/deH genomic DNA.
T4775 936-941 VBG denotes Using
T4776 1044-1049 VBD denotes found
T4777 942-950 NN denotes sequence
T4778 951-962 NN denotes information
T4779 963-967 IN denotes from
T4780 968-975 NNP denotes Agulnik
T4781 976-978 FW denotes et
T4782 979-982 FW denotes al.
T4783 983-984 -LRB- denotes (
T4784 984-988 CD denotes 1998
T4785 988-989 -RRB- denotes )
T4786 990-993 CC denotes and
T4787 994-997 DT denotes the
T4788 1031-1039 NN denotes sequence
T4789 998-1007 RB denotes partially
T4790 1008-1017 VBN denotes completed
T4791 1018-1023 NN denotes mouse
T4792 1024-1030 NN denotes genome
T4793 1039-1041 , denotes ,
T4794 1041-1043 PRP denotes we
T4795 1050-1054 IN denotes that
T4796 1100-1109 VBN denotes amplified
T4797 1055-1063 NNS denotes portions
T4798 1064-1066 IN denotes of
T4799 1067-1074 JJ denotes several
T4800 1081-1086 NNS denotes exons
T4801 1075-1080 NN denotes Tbx15
T4802 1087-1092 MD denotes could
T4803 1093-1096 RB denotes not
T4804 1097-1099 VB denotes be
T4805 1110-1114 IN denotes from
T4806 1115-1118 NN denotes deH
T4807 1119-1122 NN denotes deH
T4808 1118-1119 HYPH denotes /
T4809 1131-1134 NN denotes DNA
T4810 1123-1130 JJ denotes genomic
T4811 1134-1135 . denotes .
R3242 T4775 T4776 advcl Using,found
R3243 T4777 T4778 compound sequence,information
R3244 T4778 T4775 dobj information,Using
R3245 T4779 T4778 prep from,information
R3246 T4780 T4779 pobj Agulnik,from
R3247 T4781 T4782 advmod et,al.
R3248 T4782 T4780 advmod al.,Agulnik
R3249 T4783 T4780 punct (,Agulnik
R3250 T4784 T4780 npadvmod 1998,Agulnik
R3251 T4785 T4780 punct ),Agulnik
R3252 T4786 T4778 cc and,information
R3253 T4787 T4788 det the,sequence
R3255 T4789 T4790 advmod partially,completed
R3256 T4790 T4788 amod completed,sequence
R3257 T4791 T4792 compound mouse,genome
R3258 T4792 T4788 compound genome,sequence
R3259 T4793 T4776 punct ", ",found
R3260 T4794 T4776 nsubj we,found
R3261 T4795 T4796 mark that,amplified
R3262 T4796 T4776 ccomp amplified,found
R3263 T4797 T4796 nsubjpass portions,amplified
R3264 T4798 T4797 prep of,portions
R3265 T4799 T4800 amod several,exons
R3266 T4800 T4798 pobj exons,of
R3267 T4801 T4800 compound Tbx15,exons
R3268 T4802 T4796 aux could,amplified
R3269 T4803 T4796 neg not,amplified
R3270 T4804 T4796 auxpass be,amplified
R3271 T4805 T4796 prep from,amplified
R3272 T4806 T4807 nmod deH,deH
R3273 T4807 T4809 nmod deH,DNA
R3274 T4808 T4807 punct /,deH
R3275 T4809 T4805 pobj DNA,from
R3276 T4810 T4809 amod genomic,DNA
R3277 T4811 T4776 punct .,found
R3254 T4788 T4778 conj sequence,information

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4442 1018-1023 NCBITaxon:10088 denotes mouse
T4443 1024-1030 SO:0001026 denotes genome
T4444 1055-1066 _FRAGMENT denotes portions of
T4445 1081-1086 SO:0000852 denotes exons
T4446 1075-1080 PR:000016145 denotes Tbx15
T4447 1123-1130 SO:0001026 denotes genomic
R3086 T4445 T4444 _lexicallyChainedTo exons,portions of

2_test

Id Subject Object Predicate Lexical cue
14737183-9693034-84902996 984-988 9693034 denotes 1998
T43472 984-988 9693034 denotes 1998

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4523 942-950 SO_EXT:biological_sequence denotes sequence
T4524 1018-1023 NCBITaxon:10088 denotes mouse
T4525 1024-1030 SO_EXT:0001026 denotes genome
T4526 1031-1039 SO_EXT:biological_sequence denotes sequence
T4527 1055-1066 _FRAGMENT denotes portions of
T4528 1081-1086 SO_EXT:0000852 denotes exons
T4529 1075-1080 PR_EXT:000016145 denotes Tbx15
T4530 1123-1134 SO_EXT:genomic_DNA denotes genomic DNA
T4531 1131-1134 CHEBI_SO_EXT:DNA denotes DNA
R3087 T4528 T4527 _lexicallyChainedTo exons,portions of