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PMC:3062687 / 32949-33167 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T22254 165-168 P10145 denotes IL8
T22255 173-179 P25963 denotes NFKBIA
T22256 192-196 P60709 denotes ACTB

2_test

Id Subject Object Predicate Lexical cue
21399639-18045535-74765190 86-87 18045535 denotes 6
21399639-18045535-74765190 86-87 18045535 denotes 6
21399639-18045535-74765191 216-217 18045535 denotes 6
21399639-18045535-74765191 216-217 18045535 denotes 6

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T22217 0-9 NN denotes Chromatin
T22218 10-29 NN denotes Immunoprecipitation
T22219 30-31 -LRB- denotes (
T22220 31-35 NN denotes ChIP
T22221 35-36 -RRB- denotes )
T22222 37-41 NN denotes ChIP
T22223 42-48 NN denotes assays
T22224 49-52 VB denotes was
T22225 53-62 VB denotes performed
T22226 63-65 IN denotes as
T22227 66-76 RB denotes previously
T22228 77-87 NN denotes described6
T22229 89-92 DT denotes The
T22230 93-100 NN denotes primers
T22231 101-105 VB denotes used
T22232 106-108 TO denotes to
T22233 109-116 VB denotes amplify
T22234 117-120 DT denotes the
T22235 121-129 NN denotes promoter
T22236 130-136 NN denotes region
T22237 137-145 JJ denotes adjacent
T22238 146-148 TO denotes to
T22239 149-152 DT denotes the
T22240 153-155 NN denotes κB
T22241 156-161 NN denotes sites
T22242 162-164 IN denotes of
T22243 165-168 NN denotes IL8
T22244 169-172 CC denotes and
T22245 173-179 NN denotes NFKBIA
T22246 179-180 -COMMA- denotes ,
T22247 181-183 RB denotes as
T22248 184-188 RB denotes well
T22249 189-191 IN denotes as
T22250 192-196 NN denotes ACTB
T22251 197-201 VB denotes have
T22252 202-206 VB denotes been
T22253 207-217 NN denotes described6
R17699 T22218 T22217 arg1Of Immunoprecipitation,Chromatin
R17700 T22218 T22219 arg1Of Immunoprecipitation,(
R17701 T22220 T22219 arg2Of ChIP,(
R17702 T22221 T22219 arg3Of ),(
R17703 T22223 T22222 arg1Of assays,ChIP
R17704 T22223 T22224 arg1Of assays,was
R17705 T22223 T22225 arg2Of assays,performed
R17706 T22225 T22224 arg2Of performed,was
R17707 T22225 T22226 arg1Of performed,as
R17708 T22228 T22226 arg2Of described6,as
R17709 T22228 T22227 arg1Of described6,previously
R17710 T22230 T22231 arg2Of primers,used
R17711 T22230 T22249 arg1Of primers,as
R17712 T22233 T22231 arg3Of amplify,used
R17713 T22233 T22232 arg1Of amplify,to
R17714 T22236 T22233 arg2Of region,amplify
R17715 T22236 T22234 arg1Of region,the
R17716 T22236 T22235 arg1Of region,promoter
R17717 T22236 T22237 arg1Of region,adjacent
R17718 T22237 T22238 arg1Of adjacent,to
R17719 T22241 T22238 arg2Of sites,to
R17720 T22241 T22239 arg1Of sites,the
R17721 T22241 T22240 arg1Of sites,κB
R17722 T22241 T22242 arg1Of sites,of
R17723 T22243 T22244 arg1Of IL8,and
R17724 T22244 T22242 arg2Of and,of
R17725 T22245 T22244 arg2Of NFKBIA,and
R17726 T22249 T22229 arg1Of as,The
R17727 T22249 T22246 arg1Of as,","
R17728 T22249 T22247 arg1Of as,as
R17729 T22249 T22248 arg1Of as,well
R17730 T22249 T22251 arg1Of as,have
R17731 T22249 T22252 arg1Of as,been
R17732 T22250 T22249 arg2Of ACTB,as
R17733 T22252 T22251 arg2Of been,have
R17734 T22253 T22252 arg2Of described6,been

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T22257 0-9 NNP denotes Chromatin
T22258 10-29 NNP denotes Immunoprecipitation
T22259 30-31 -LRB- denotes (
T22260 31-35 NNP denotes ChIP
T22261 35-36 -RRB- denotes )
T22262 37-41 NNP denotes ChIP
T22263 42-48 NNS denotes assays
T22264 49-52 VBD denotes was
T22265 53-62 VBN denotes performed
T22266 63-65 IN denotes as
T22267 66-76 RB denotes previously
T22268 77-87 CD denotes described6
T22269 87-88 . denotes .
T22270 89-92 DT denotes The
T22271 93-100 NNS denotes primers
T22272 101-105 VBN denotes used
T22273 106-108 TO denotes to
T22274 109-116 VB denotes amplify
T22275 117-120 DT denotes the
T22276 121-129 NN denotes promoter
T22277 130-136 NN denotes region
T22278 137-145 JJ denotes adjacent
T22279 146-148 TO denotes to
T22280 149-152 DT denotes the
T22281 153-155 NN denotes κB
T22282 156-161 NNS denotes sites
T22283 162-164 IN denotes of
T22284 165-168 CD denotes IL8
T22285 169-172 CC denotes and
T22286 173-179 NNP denotes NFKBIA
T22287 179-180 , denotes ,
T22288 181-183 RB denotes as
T22289 184-188 RB denotes well
T22290 189-191 IN denotes as
T22291 192-196 NNP denotes ACTB
T22292 197-201 VBP denotes have
T22293 202-206 VBN denotes been
T22294 207-217 JJ denotes described6
T22295 217-218 . denotes .
R17735 T22257 T22258 compound Chromatin,Immunoprecipitation
R17736 T22258 T22258 ROOT Immunoprecipitation,Immunoprecipitation
R17737 T22259 T22260 punct (,ChIP
R17738 T22260 T22258 appos ChIP,Immunoprecipitation
R17739 T22261 T22258 punct ),Immunoprecipitation
R17740 T22262 T22263 compound ChIP,assays
R17741 T22263 T22265 nsubjpass assays,performed
R17742 T22264 T22265 auxpass was,performed
R17743 T22265 T22265 ROOT performed,performed
R17744 T22266 T22265 prep as,performed
R17745 T22267 T22268 advmod previously,described6
R17746 T22268 T22266 pobj described6,as
R17747 T22269 T22265 punct .,performed
R17748 T22270 T22271 det The,primers
R17749 T22271 T22272 nsubj primers,used
R17750 T22272 T22272 ROOT used,used
R17751 T22273 T22274 aux to,amplify
R17752 T22274 T22272 xcomp amplify,used
R17753 T22275 T22277 det the,region
R17754 T22276 T22277 compound promoter,region
R17755 T22277 T22274 dobj region,amplify
R17756 T22278 T22293 advmod adjacent,been
R17757 T22279 T22278 prep to,adjacent
R17758 T22280 T22282 det the,sites
R17759 T22281 T22282 amod κB,sites
R17760 T22282 T22279 pobj sites,to
R17761 T22283 T22282 prep of,sites
R17762 T22284 T22283 pobj IL8,of
R17763 T22285 T22284 cc and,IL8
R17764 T22286 T22284 conj NFKBIA,IL8
R17765 T22287 T22282 punct ",",sites
R17766 T22288 T22290 advmod as,as
R17767 T22289 T22290 advmod well,as
R17768 T22290 T22282 cc as,sites
R17769 T22291 T22282 conj ACTB,sites
R17770 T22292 T22293 aux have,been
R17771 T22293 T22294 auxpass been,described6
R17772 T22294 T22272 conj described6,used
R17773 T22295 T22272 punct .,used

GO-CC

Id Subject Object Predicate Lexical cue
T22302 0-9 http://purl.obolibrary.org/obo/GO_0000785 denotes Chromatin

sentences

Id Subject Object Predicate Lexical cue
T22214 0-36 Sentence denotes Chromatin Immunoprecipitation (ChIP)
T22215 37-88 Sentence denotes ChIP assays was performed as previously described6.
T22216 89-218 Sentence denotes The primers used to amplify the promoter region adjacent to the κB sites of IL8 and NFKBIA, as well as ACTB have been described6.
T231 0-36 Sentence denotes Chromatin Immunoprecipitation (ChIP)
T232 37-88 Sentence denotes ChIP assays was performed as previously described6.
T233 89-218 Sentence denotes The primers used to amplify the promoter region adjacent to the κB sites of IL8 and NFKBIA, as well as ACTB have been described6.

events-check-again

Id Subject Object Predicate Lexical cue
T22318 165-168 Protein denotes IL8
T22319 173-179 Protein denotes NFKBIA
T22320 192-196 Protein denotes ACTB

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T22309 0-9 Protein denotes Chromatin
T22310 153-161 Protein denotes κB sites
T22311 165-168 Protein denotes IL8
T22312 173-179 Protein denotes NFKBIA
T22313 192-196 Protein denotes ACTB
T22314 130-136 Entity denotes region
R17774 T22310 T22314 partOf κB sites,region
R17775 T22311 T22314 partOf IL8,region
R17776 T22312 T22314 partOf NFKBIA,region
R17777 T22313 T22314 partOf ACTB,region

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T22211 165-168 Protein denotes IL8
T22212 173-179 Protein denotes NFKBIA
T22213 192-196 Protein denotes ACTB

test2

Id Subject Object Predicate Lexical cue
T22208 165-168 Protein denotes IL8
T22209 173-179 Protein denotes NFKBIA
T22210 192-196 Protein denotes ACTB