PMC:3062687 / 28191-29296
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20205 | 211-215 | P25963 | denotes | IκBα |
T20206 | 232-235 | P21579 | denotes | p65 |
T20207 | 232-235 | Q04206 | denotes | p65 |
T20208 | 336-343 | P60709 | denotes | β-actin |
T20209 | 528-532 | O14920 | denotes | IKKβ |
T20210 | 682-686 | P25963 | denotes | IκBα |
T20211 | 895-899 | P23396 | denotes | RPS3 |
T20212 | 1004-1008 | P23396 | denotes | RPS3 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
21399639-18045535-74765182 | 937-938 | 18045535 | denotes | 6 |
21399639-18045535-74765182 | 937-938 | 18045535 | denotes | 6 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20213 | 0-5 | NNS | denotes | Cells |
T20214 | 6-9 | CC | denotes | and |
T20215 | 10-18 | NNP | denotes | Reagents |
T20216 | 19-25 | NNP | denotes | Jurkat |
T20217 | 26-28 | NNP | denotes | E6 |
T20218 | 28-30 | CD | denotes | .1 |
T20219 | 30-31 | , | denotes | , |
T20220 | 32-39 | CD | denotes | HEK293T |
T20221 | 40-43 | CC | denotes | and |
T20222 | 44-48 | NNP | denotes | HeLa |
T20223 | 49-54 | NNS | denotes | cells |
T20224 | 55-59 | VBD | denotes | were |
T20225 | 60-68 | VBN | denotes | cultured |
T20226 | 69-71 | IN | denotes | in |
T20227 | 72-76 | NNP | denotes | RPMI |
T20228 | 77-81 | CD | denotes | 1640 |
T20229 | 82-85 | CC | denotes | and |
T20230 | 86-90 | NNP | denotes | DMEM |
T20231 | 91-103 | VBD | denotes | supplemented |
T20232 | 104-108 | IN | denotes | with |
T20233 | 109-111 | CD | denotes | 10 |
T20234 | 111-112 | NN | denotes | % |
T20235 | 113-118 | JJ | denotes | fetal |
T20236 | 119-123 | NN | denotes | calf |
T20237 | 124-129 | NN | denotes | serum |
T20238 | 129-130 | , | denotes | , |
T20239 | 131-132 | CD | denotes | 2 |
T20240 | 133-135 | NNP | denotes | mM |
T20241 | 136-145 | NN | denotes | glutamine |
T20242 | 145-146 | , | denotes | , |
T20243 | 147-150 | CC | denotes | and |
T20244 | 151-154 | CD | denotes | 100 |
T20245 | 155-159 | NNP | denotes | U/ml |
T20246 | 160-164 | DT | denotes | each |
T20247 | 165-167 | IN | denotes | of |
T20248 | 168-178 | NN | denotes | penicillin |
T20249 | 179-182 | CC | denotes | and |
T20250 | 183-195 | NN | denotes | streptomycin |
T20251 | 195-196 | , | denotes | , |
T20252 | 197-209 | RB | denotes | respectively |
T20253 | 209-210 | . | denotes | . |
T20254 | 211-215 | NNP | denotes | IκBα |
T20255 | 216-217 | -LRB- | denotes | ( |
T20256 | 217-221 | NNP | denotes | C-21 |
T20257 | 221-222 | , | denotes | , |
T20258 | 223-229 | JJ | denotes | sc-371 |
T20259 | 229-230 | -RRB- | denotes | ) |
T20260 | 230-231 | , | denotes | , |
T20261 | 232-235 | NNS | denotes | p65 |
T20262 | 236-237 | -LRB- | denotes | ( |
T20263 | 237-241 | NN | denotes | C-20 |
T20264 | 241-242 | , | denotes | , |
T20265 | 243-249 | JJ | denotes | sc-372 |
T20266 | 249-250 | -RRB- | denotes | ) |
T20267 | 250-251 | , | denotes | , |
T20268 | 252-255 | CC | denotes | and |
T20269 | 256-273 | NN | denotes | phospho-threonine |
T20270 | 274-275 | -LRB- | denotes | ( |
T20271 | 275-278 | NN | denotes | H-2 |
T20272 | 278-279 | , | denotes | , |
T20273 | 280-287 | JJ | denotes | sc-5267 |
T20274 | 287-288 | -RRB- | denotes | ) |
T20275 | 289-299 | NNS | denotes | antibodies |
T20276 | 300-304 | VBD | denotes | were |
T20277 | 305-309 | IN | denotes | from |
T20278 | 310-315 | NNP | denotes | Santa |
T20279 | 316-320 | NNP | denotes | Cruz |
T20280 | 321-334 | NNP | denotes | Biotechnology |
T20281 | 334-335 | : | denotes | ; |
T20282 | 336-343 | NN | denotes | β-actin |
T20283 | 344-345 | -LRB- | denotes | ( |
T20284 | 345-350 | NNP | denotes | AC-15 |
T20285 | 350-351 | , | denotes | , |
T20286 | 352-357 | NNP | denotes | A5441 |
T20287 | 357-358 | -RRB- | denotes | ) |
T20288 | 358-359 | , | denotes | , |
T20289 | 360-364 | NNP | denotes | Flag |
T20290 | 365-366 | -LRB- | denotes | ( |
T20291 | 366-368 | NNP | denotes | M2 |
T20292 | 368-369 | , | denotes | , |
T20293 | 370-375 | NNP | denotes | F3165 |
T20294 | 375-376 | -RRB- | denotes | ) |
T20295 | 376-377 | , | denotes | , |
T20296 | 378-380 | NNP | denotes | HA |
T20297 | 381-382 | -LRB- | denotes | ( |
T20298 | 382-386 | NNP | denotes | HA-7 |
T20299 | 386-387 | , | denotes | , |
T20300 | 388-393 | NNP | denotes | H3663 |
T20301 | 393-394 | -RRB- | denotes | ) |
T20302 | 394-395 | , | denotes | , |
T20303 | 396-406 | JJ | denotes | importin-α |
T20304 | 407-408 | -LRB- | denotes | ( |
T20305 | 408-413 | NN | denotes | IM-75 |
T20306 | 413-414 | , | denotes | , |
T20307 | 415-420 | NNP | denotes | I1784 |
T20308 | 420-421 | -RRB- | denotes | ) |
T20309 | 421-422 | , | denotes | , |
T20310 | 423-426 | CC | denotes | and |
T20311 | 427-437 | JJ | denotes | importin-β |
T20312 | 438-439 | -LRB- | denotes | ( |
T20313 | 439-443 | NNP | denotes | 31H4 |
T20314 | 443-444 | , | denotes | , |
T20315 | 445-450 | NNP | denotes | I2534 |
T20316 | 450-451 | -RRB- | denotes | ) |
T20317 | 452-462 | NNS | denotes | antibodies |
T20318 | 463-467 | VBD | denotes | were |
T20319 | 468-472 | IN | denotes | from |
T20320 | 473-478 | NNP | denotes | Sigma |
T20321 | 478-479 | : | denotes | ; |
T20322 | 480-484 | NNP | denotes | PARP |
T20323 | 485-486 | -LRB- | denotes | ( |
T20324 | 486-491 | NNP | denotes | C2-10 |
T20325 | 491-492 | , | denotes | , |
T20326 | 493-499 | CD | denotes | 556362 |
T20327 | 499-500 | -RRB- | denotes | ) |
T20328 | 500-501 | , | denotes | , |
T20329 | 502-506 | NNP | denotes | IKKα |
T20330 | 507-508 | -LRB- | denotes | ( |
T20331 | 508-513 | NNP | denotes | B78-1 |
T20332 | 513-514 | , | denotes | , |
T20333 | 515-521 | CD | denotes | 556532 |
T20334 | 521-522 | -RRB- | denotes | ) |
T20335 | 522-523 | , | denotes | , |
T20336 | 524-527 | CC | denotes | and |
T20337 | 528-532 | NNP | denotes | IKKβ |
T20338 | 533-534 | -LRB- | denotes | ( |
T20339 | 534-536 | CD | denotes | 24 |
T20340 | 536-537 | , | denotes | , |
T20341 | 538-544 | CD | denotes | 611254 |
T20342 | 544-545 | -RRB- | denotes | ) |
T20343 | 546-556 | NNS | denotes | antibodies |
T20344 | 557-561 | VBD | denotes | were |
T20345 | 562-566 | IN | denotes | from |
T20346 | 567-569 | NNP | denotes | BD |
T20347 | 570-580 | NNP | denotes | Pharmingen |
T20348 | 580-581 | : | denotes | ; |
T20349 | 582-586 | NNP | denotes | CK2α |
T20350 | 587-588 | -LRB- | denotes | ( |
T20351 | 588-590 | CD | denotes | 31 |
T20352 | 590-591 | , | denotes | , |
T20353 | 592-598 | CD | denotes | 611610 |
T20354 | 598-599 | -RRB- | denotes | ) |
T20355 | 600-603 | CC | denotes | and |
T20356 | 604-609 | NNP | denotes | Hsp90 |
T20357 | 610-611 | -LRB- | denotes | ( |
T20358 | 611-613 | CD | denotes | 68 |
T20359 | 613-614 | , | denotes | , |
T20360 | 615-621 | CD | denotes | 610418 |
T20361 | 621-622 | -RRB- | denotes | ) |
T20362 | 623-633 | NNS | denotes | antibodies |
T20363 | 634-638 | VBD | denotes | were |
T20364 | 639-643 | IN | denotes | from |
T20365 | 644-646 | NNP | denotes | BD |
T20366 | 647-659 | NNP | denotes | Transduction |
T20367 | 660-672 | NNPS | denotes | Laboratories |
T20368 | 672-673 | : | denotes | ; |
T20369 | 674-686 | NNP | denotes | phospho-IκBα |
T20370 | 687-688 | -LRB- | denotes | ( |
T20371 | 688-691 | NNP | denotes | 5A5 |
T20372 | 691-692 | , | denotes | , |
T20373 | 693-698 | NNP | denotes | 9246S |
T20374 | 698-699 | -RRB- | denotes | ) |
T20375 | 700-703 | CC | denotes | and |
T20376 | 704-716 | JJ | denotes | phospho-IKKα |
T20377 | 716-717 | NN | denotes | / |
T20378 | 717-718 | NN | denotes | β |
T20379 | 719-720 | -LRB- | denotes | ( |
T20380 | 720-724 | NNP | denotes | 16A6 |
T20381 | 724-725 | , | denotes | , |
T20382 | 726-731 | NNP | denotes | 2697S |
T20383 | 731-732 | -RRB- | denotes | ) |
T20384 | 733-743 | NNS | denotes | antibodies |
T20385 | 744-748 | VBD | denotes | were |
T20386 | 749-753 | IN | denotes | from |
T20387 | 754-758 | NNP | denotes | Cell |
T20388 | 759-768 | NNP | denotes | Signaling |
T20389 | 769-779 | NNP | denotes | Technology |
T20390 | 779-780 | : | denotes | ; |
T20391 | 781-795 | NN | denotes | phospho-serine |
T20392 | 796-797 | -LRB- | denotes | ( |
T20393 | 797-803 | NNP | denotes | AB1603 |
T20394 | 803-804 | -RRB- | denotes | ) |
T20395 | 805-808 | CC | denotes | and |
T20396 | 809-825 | JJ | denotes | phospho-tyrosine |
T20397 | 826-827 | -LRB- | denotes | ( |
T20398 | 827-831 | NNP | denotes | 4G10 |
T20399 | 831-832 | , | denotes | , |
T20400 | 833-839 | CD | denotes | 05-777 |
T20401 | 839-840 | -RRB- | denotes | ) |
T20402 | 841-851 | NNS | denotes | antibodies |
T20403 | 852-856 | VBD | denotes | were |
T20404 | 857-861 | IN | denotes | from |
T20405 | 862-871 | NNP | denotes | Millipore |
T20406 | 871-872 | . | denotes | . |
T20407 | 873-876 | DT | denotes | The |
T20408 | 877-883 | NN | denotes | rabbit |
T20409 | 884-894 | NN | denotes | polyclonal |
T20410 | 895-899 | NNP | denotes | RPS3 |
T20411 | 900-909 | NN | denotes | antiserum |
T20412 | 910-913 | VBD | denotes | was |
T20413 | 914-916 | IN | denotes | as |
T20414 | 917-926 | VBN | denotes | described |
T20415 | 927-938 | NNS | denotes | previously6 |
T20416 | 938-939 | . | denotes | . |
T20417 | 940-943 | DT | denotes | The |
T20418 | 944-950 | NN | denotes | rabbit |
T20419 | 951-961 | NN | denotes | polyclonal |
T20420 | 962-970 | NN | denotes | antibody |
T20421 | 971-979 | NN | denotes | specific |
T20422 | 980-983 | IN | denotes | for |
T20423 | 984-988 | NNP | denotes | S209 |
T20424 | 989-1003 | VBD | denotes | phosphorylated |
T20425 | 1004-1008 | CD | denotes | RPS3 |
T20426 | 1009-1012 | VBD | denotes | was |
T20427 | 1013-1022 | VBN | denotes | generated |
T20428 | 1023-1026 | CC | denotes | and |
T20429 | 1027-1035 | NN | denotes | affinity |
T20430 | 1036-1044 | VBN | denotes | purified |
T20431 | 1045-1047 | IN | denotes | by |
T20432 | 1048-1053 | NNP | denotes | Primm |
T20433 | 1054-1061 | NNP | denotes | Biotech |
T20434 | 1062-1067 | VBG | denotes | using |
T20435 | 1068-1071 | DT | denotes | the |
T20436 | 1072-1079 | NN | denotes | peptide |
T20437 | 1080-1092 | NN | denotes | NH2-CKPLPDHV |
T20438 | 1092-1093 | -LRB- | denotes | ( |
T20439 | 1093-1095 | NNP | denotes | Sp |
T20440 | 1095-1096 | -RRB- | denotes | ) |
T20441 | 1096-1104 | NNP | denotes | IVE-COOH |
T20442 | 1104-1105 | . | denotes | . |
R16114 | T20213 | T20224 | nsubj | Cells,were |
R16115 | T20214 | T20213 | cc | and,Cells |
R16116 | T20215 | T20223 | nmod | Reagents,cells |
R16117 | T20216 | T20217 | compound | Jurkat,E6 |
R16118 | T20217 | T20215 | dobj | E6,Reagents |
R16119 | T20218 | T20217 | appos | .1,E6 |
R16120 | T20219 | T20217 | punct | ",",E6 |
R16121 | T20220 | T20217 | appos | HEK293T,E6 |
R16122 | T20221 | T20217 | cc | and,E6 |
R16123 | T20222 | T20217 | conj | HeLa,E6 |
R16124 | T20223 | T20213 | conj | cells,Cells |
R16125 | T20224 | T20224 | ROOT | were,were |
R16126 | T20225 | T20224 | acomp | cultured,were |
R16127 | T20226 | T20225 | prep | in,cultured |
R16128 | T20227 | T20228 | compound | RPMI,1640 |
R16129 | T20228 | T20226 | pobj | 1640,in |
R16130 | T20229 | T20224 | cc | and,were |
R16131 | T20230 | T20231 | nsubj | DMEM,supplemented |
R16132 | T20231 | T20224 | conj | supplemented,were |
R16133 | T20232 | T20231 | prep | with,supplemented |
R16134 | T20233 | T20234 | nummod | 10,% |
R16135 | T20234 | T20237 | compound | %,serum |
R16136 | T20235 | T20236 | amod | fetal,calf |
R16137 | T20236 | T20237 | compound | calf,serum |
R16138 | T20237 | T20232 | pobj | serum,with |
R16139 | T20238 | T20237 | punct | ",",serum |
R16140 | T20239 | T20241 | nummod | 2,glutamine |
R16141 | T20240 | T20241 | compound | mM,glutamine |
R16142 | T20241 | T20237 | conj | glutamine,serum |
R16143 | T20242 | T20241 | punct | ",",glutamine |
R16144 | T20243 | T20241 | cc | and,glutamine |
R16145 | T20244 | T20245 | nummod | 100,U/ml |
R16146 | T20245 | T20241 | conj | U/ml,glutamine |
R16147 | T20246 | T20245 | npadvmod | each,U/ml |
R16148 | T20247 | T20246 | prep | of,each |
R16149 | T20248 | T20247 | pobj | penicillin,of |
R16150 | T20249 | T20248 | cc | and,penicillin |
R16151 | T20250 | T20248 | conj | streptomycin,penicillin |
R16152 | T20251 | T20246 | punct | ",",each |
R16153 | T20252 | T20246 | conj | respectively,each |
R16154 | T20253 | T20231 | punct | .,supplemented |
R16155 | T20254 | T20256 | nmod | IκBα,C-21 |
R16156 | T20255 | T20256 | punct | (,C-21 |
R16157 | T20256 | T20276 | nsubj | C-21,were |
R16158 | T20257 | T20256 | punct | ",",C-21 |
R16159 | T20258 | T20256 | amod | sc-371,C-21 |
R16160 | T20259 | T20258 | punct | ),sc-371 |
R16161 | T20260 | T20256 | punct | ",",C-21 |
R16162 | T20261 | T20256 | conj | p65,C-21 |
R16163 | T20262 | T20261 | punct | (,p65 |
R16164 | T20263 | T20271 | nmod | C-20,H-2 |
R16165 | T20264 | T20263 | punct | ",",C-20 |
R16166 | T20265 | T20263 | conj | sc-372,C-20 |
R16167 | T20266 | T20265 | punct | ),sc-372 |
R16168 | T20267 | T20263 | punct | ",",C-20 |
R16169 | T20268 | T20263 | cc | and,C-20 |
R16170 | T20269 | T20263 | conj | phospho-threonine,C-20 |
R16171 | T20270 | T20271 | punct | (,H-2 |
R16172 | T20271 | T20261 | appos | H-2,p65 |
R16173 | T20272 | T20271 | punct | ",",H-2 |
R16174 | T20273 | T20271 | conj | sc-5267,H-2 |
R16175 | T20274 | T20273 | punct | ),sc-5267 |
R16176 | T20275 | T20271 | conj | antibodies,H-2 |
R16177 | T20276 | T20318 | ccomp | were,were |
R16178 | T20277 | T20276 | prep | from,were |
R16179 | T20278 | T20279 | compound | Santa,Cruz |
R16180 | T20279 | T20280 | compound | Cruz,Biotechnology |
R16181 | T20280 | T20277 | pobj | Biotechnology,from |
R16182 | T20281 | T20318 | punct | ;,were |
R16183 | T20282 | T20318 | nsubj | β-actin,were |
R16184 | T20283 | T20284 | punct | (,AC-15 |
R16185 | T20284 | T20282 | appos | AC-15,β-actin |
R16186 | T20285 | T20284 | punct | ",",AC-15 |
R16187 | T20286 | T20284 | appos | A5441,AC-15 |
R16188 | T20287 | T20284 | punct | ),AC-15 |
R16189 | T20288 | T20284 | punct | ",",AC-15 |
R16190 | T20289 | T20298 | nmod | Flag,HA-7 |
R16191 | T20290 | T20291 | punct | (,M2 |
R16192 | T20291 | T20289 | appos | M2,Flag |
R16193 | T20292 | T20291 | punct | ",",M2 |
R16194 | T20293 | T20291 | appos | F3165,M2 |
R16195 | T20294 | T20291 | punct | ),M2 |
R16196 | T20295 | T20289 | punct | ",",Flag |
R16197 | T20296 | T20298 | nmod | HA,HA-7 |
R16198 | T20297 | T20298 | punct | (,HA-7 |
R16199 | T20298 | T20284 | conj | HA-7,AC-15 |
R16200 | T20299 | T20298 | punct | ",",HA-7 |
R16201 | T20300 | T20298 | conj | H3663,HA-7 |
R16202 | T20301 | T20298 | punct | ),HA-7 |
R16203 | T20302 | T20298 | punct | ",",HA-7 |
R16204 | T20303 | T20298 | conj | importin-α,HA-7 |
R16205 | T20304 | T20305 | punct | (,IM-75 |
R16206 | T20305 | T20303 | appos | IM-75,importin-α |
R16207 | T20306 | T20305 | punct | ",",IM-75 |
R16208 | T20307 | T20305 | appos | I1784,IM-75 |
R16209 | T20308 | T20305 | punct | ),IM-75 |
R16210 | T20309 | T20305 | punct | ",",IM-75 |
R16211 | T20310 | T20303 | cc | and,importin-α |
R16212 | T20311 | T20303 | conj | importin-β,importin-α |
R16213 | T20312 | T20317 | punct | (,antibodies |
R16214 | T20313 | T20317 | nmod | 31H4,antibodies |
R16215 | T20314 | T20313 | punct | ",",31H4 |
R16216 | T20315 | T20313 | conj | I2534,31H4 |
R16217 | T20316 | T20317 | punct | ),antibodies |
R16218 | T20317 | T20284 | appos | antibodies,AC-15 |
R16219 | T20318 | T20344 | ccomp | were,were |
R16220 | T20319 | T20318 | prep | from,were |
R16221 | T20320 | T20319 | pobj | Sigma,from |
R16222 | T20321 | T20344 | punct | ;,were |
R16223 | T20322 | T20343 | compound | PARP,antibodies |
R16224 | T20323 | T20324 | punct | (,C2-10 |
R16225 | T20324 | T20322 | appos | C2-10,PARP |
R16226 | T20325 | T20324 | punct | ",",C2-10 |
R16227 | T20326 | T20324 | appos | 556362,C2-10 |
R16228 | T20327 | T20324 | punct | ),C2-10 |
R16229 | T20328 | T20324 | punct | ",",C2-10 |
R16230 | T20329 | T20324 | conj | IKKα,C2-10 |
R16231 | T20330 | T20331 | punct | (,B78-1 |
R16232 | T20331 | T20329 | appos | B78-1,IKKα |
R16233 | T20332 | T20331 | punct | ",",B78-1 |
R16234 | T20333 | T20331 | appos | 556532,B78-1 |
R16235 | T20334 | T20331 | punct | ),B78-1 |
R16236 | T20335 | T20329 | punct | ",",IKKα |
R16237 | T20336 | T20329 | cc | and,IKKα |
R16238 | T20337 | T20329 | conj | IKKβ,IKKα |
R16239 | T20338 | T20337 | punct | (,IKKβ |
R16240 | T20339 | T20337 | appos | 24,IKKβ |
R16241 | T20340 | T20337 | punct | ",",IKKβ |
R16242 | T20341 | T20337 | appos | 611254,IKKβ |
R16243 | T20342 | T20337 | punct | ),IKKβ |
R16244 | T20343 | T20344 | nsubj | antibodies,were |
R16245 | T20344 | T20363 | ccomp | were,were |
R16246 | T20345 | T20344 | prep | from,were |
R16247 | T20346 | T20347 | compound | BD,Pharmingen |
R16248 | T20347 | T20345 | pobj | Pharmingen,from |
R16249 | T20348 | T20363 | punct | ;,were |
R16250 | T20349 | T20363 | nsubj | CK2α,were |
R16251 | T20350 | T20351 | punct | (,31 |
R16252 | T20351 | T20349 | nummod | 31,CK2α |
R16253 | T20352 | T20349 | punct | ",",CK2α |
R16254 | T20353 | T20349 | appos | 611610,CK2α |
R16255 | T20354 | T20349 | punct | ),CK2α |
R16256 | T20355 | T20349 | cc | and,CK2α |
R16257 | T20356 | T20349 | conj | Hsp90,CK2α |
R16258 | T20357 | T20356 | punct | (,Hsp90 |
R16259 | T20358 | T20356 | appos | 68,Hsp90 |
R16260 | T20359 | T20356 | punct | ",",Hsp90 |
R16261 | T20360 | T20356 | appos | 610418,Hsp90 |
R16262 | T20361 | T20356 | punct | ),Hsp90 |
R16263 | T20362 | T20363 | nsubj | antibodies,were |
R16264 | T20363 | T20385 | ccomp | were,were |
R16265 | T20364 | T20363 | prep | from,were |
R16266 | T20365 | T20367 | compound | BD,Laboratories |
R16267 | T20366 | T20367 | compound | Transduction,Laboratories |
R16268 | T20367 | T20364 | pobj | Laboratories,from |
R16269 | T20368 | T20385 | punct | ;,were |
R16270 | T20369 | T20385 | nsubj | phospho-IκBα,were |
R16271 | T20370 | T20371 | punct | (,5A5 |
R16272 | T20371 | T20369 | appos | 5A5,phospho-IκBα |
R16273 | T20372 | T20371 | punct | ",",5A5 |
R16274 | T20373 | T20371 | appos | 9246S,5A5 |
R16275 | T20374 | T20371 | punct | ),5A5 |
R16276 | T20375 | T20371 | cc | and,5A5 |
R16277 | T20376 | T20378 | amod | phospho-IKKα,β |
R16278 | T20377 | T20378 | compound | /,β |
R16279 | T20378 | T20369 | conj | β,phospho-IκBα |
R16280 | T20379 | T20380 | punct | (,16A6 |
R16281 | T20380 | T20378 | appos | 16A6,β |
R16282 | T20381 | T20380 | punct | ",",16A6 |
R16283 | T20382 | T20380 | appos | 2697S,16A6 |
R16284 | T20383 | T20380 | punct | ),16A6 |
R16285 | T20384 | T20385 | nsubj | antibodies,were |
R16286 | T20385 | T20403 | ccomp | were,were |
R16287 | T20386 | T20385 | prep | from,were |
R16288 | T20387 | T20389 | compound | Cell,Technology |
R16289 | T20388 | T20389 | compound | Signaling,Technology |
R16290 | T20389 | T20386 | pobj | Technology,from |
R16291 | T20390 | T20403 | punct | ;,were |
R16292 | T20391 | T20402 | nmod | phospho-serine,antibodies |
R16293 | T20392 | T20393 | punct | (,AB1603 |
R16294 | T20393 | T20391 | appos | AB1603,phospho-serine |
R16295 | T20394 | T20393 | punct | ),AB1603 |
R16296 | T20395 | T20391 | cc | and,phospho-serine |
R16297 | T20396 | T20391 | conj | phospho-tyrosine,phospho-serine |
R16298 | T20397 | T20398 | punct | (,4G10 |
R16299 | T20398 | T20402 | nmod | 4G10,antibodies |
R16300 | T20399 | T20398 | punct | ",",4G10 |
R16301 | T20400 | T20398 | appos | 05-777,4G10 |
R16302 | T20401 | T20398 | punct | ),4G10 |
R16303 | T20402 | T20403 | nsubj | antibodies,were |
R16304 | T20403 | T20403 | ROOT | were,were |
R16305 | T20404 | T20403 | prep | from,were |
R16306 | T20405 | T20404 | pobj | Millipore,from |
R16307 | T20406 | T20403 | punct | .,were |
R16308 | T20407 | T20411 | det | The,antiserum |
R16309 | T20408 | T20411 | nmod | rabbit,antiserum |
R16310 | T20409 | T20411 | compound | polyclonal,antiserum |
R16311 | T20410 | T20411 | compound | RPS3,antiserum |
R16312 | T20411 | T20412 | nsubj | antiserum,was |
R16313 | T20412 | T20412 | ROOT | was,was |
R16314 | T20413 | T20414 | mark | as,described |
R16315 | T20414 | T20415 | amod | described,previously6 |
R16316 | T20415 | T20412 | attr | previously6,was |
R16317 | T20416 | T20412 | punct | .,was |
R16318 | T20417 | T20421 | det | The,specific |
R16319 | T20418 | T20420 | nmod | rabbit,antibody |
R16320 | T20419 | T20420 | compound | polyclonal,antibody |
R16321 | T20420 | T20421 | compound | antibody,specific |
R16322 | T20421 | T20424 | nsubj | specific,phosphorylated |
R16323 | T20422 | T20421 | prep | for,specific |
R16324 | T20423 | T20422 | pobj | S209,for |
R16325 | T20424 | T20424 | ROOT | phosphorylated,phosphorylated |
R16326 | T20425 | T20427 | nsubjpass | RPS3,generated |
R16327 | T20426 | T20427 | auxpass | was,generated |
R16328 | T20427 | T20424 | ccomp | generated,phosphorylated |
R16329 | T20428 | T20427 | cc | and,generated |
R16330 | T20429 | T20427 | conj | affinity,generated |
R16331 | T20430 | T20429 | acl | purified,affinity |
R16332 | T20431 | T20430 | agent | by,purified |
R16333 | T20432 | T20433 | compound | Primm,Biotech |
R16334 | T20433 | T20431 | pobj | Biotech,by |
R16335 | T20434 | T20429 | conj | using,affinity |
R16336 | T20435 | T20437 | det | the,NH2-CKPLPDHV |
R16337 | T20436 | T20437 | compound | peptide,NH2-CKPLPDHV |
R16338 | T20437 | T20434 | dobj | NH2-CKPLPDHV,using |
R16339 | T20438 | T20437 | punct | (,NH2-CKPLPDHV |
R16340 | T20439 | T20441 | nmod | Sp,IVE-COOH |
R16341 | T20440 | T20441 | punct | ),IVE-COOH |
R16342 | T20441 | T20437 | appos | IVE-COOH,NH2-CKPLPDHV |
R16343 | T20442 | T20424 | punct | .,phosphorylated |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20200 | 124-129 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20447 | 647-659 | http://purl.obolibrary.org/obo/GO_0009293 | denotes | Transduction |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20448 | 289-299 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T20449 | 452-462 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T20450 | 546-556 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T20451 | 623-633 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T20452 | 733-743 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T20453 | 841-851 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T20454 | 962-970 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20455 | 49-54 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T20456 | 754-758 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cell |
T20457 | 289-299 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T20458 | 452-462 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T20459 | 546-556 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T20460 | 623-633 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T20461 | 733-743 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T20462 | 841-851 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T20463 | 962-970 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
T20464 | 289-299 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T20465 | 452-462 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T20466 | 546-556 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T20467 | 623-633 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T20468 | 733-743 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T20469 | 841-851 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T20470 | 962-970 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20201 | 0-18 | Sentence | denotes | Cells and Reagents |
T20202 | 19-210 | Sentence | denotes | Jurkat E6.1, HEK293T and HeLa cells were cultured in RPMI 1640 and DMEM supplemented with 10% fetal calf serum, 2 mM glutamine, and 100 U/ml each of penicillin and streptomycin, respectively. |
T20203 | 211-939 | Sentence | denotes | IκBα (C-21, sc-371), p65 (C-20, sc-372), and phospho-threonine (H-2, sc-5267) antibodies were from Santa Cruz Biotechnology; β-actin (AC-15, A5441), Flag (M2, F3165), HA (HA-7, H3663), importin-α (IM-75, I1784), and importin-β (31H4, I2534) antibodies were from Sigma; PARP (C2-10, 556362), IKKα (B78-1, 556532), and IKKβ (24, 611254) antibodies were from BD Pharmingen; CK2α (31, 611610) and Hsp90 (68, 610418) antibodies were from BD Transduction Laboratories; phospho-IκBα (5A5, 9246S) and phospho-IKKα/β (16A6, 2697S) antibodies were from Cell Signaling Technology; phospho-serine (AB1603) and phospho-tyrosine (4G10, 05-777) antibodies were from Millipore. The rabbit polyclonal RPS3 antiserum was as described previously6. |
T20204 | 940-1105 | Sentence | denotes | The rabbit polyclonal antibody specific for S209 phosphorylated RPS3 was generated and affinity purified by Primm Biotech using the peptide NH2-CKPLPDHV(Sp)IVE-COOH. |
T190 | 0-18 | Sentence | denotes | Cells and Reagents |
T191 | 19-210 | Sentence | denotes | Jurkat E6.1, HEK293T and HeLa cells were cultured in RPMI 1640 and DMEM supplemented with 10% fetal calf serum, 2 mM glutamine, and 100 U/ml each of penicillin and streptomycin, respectively. |
T192 | 211-872 | Sentence | denotes | IκBα (C-21, sc-371), p65 (C-20, sc-372), and phospho-threonine (H-2, sc-5267) antibodies were from Santa Cruz Biotechnology; β-actin (AC-15, A5441), Flag (M2, F3165), HA (HA-7, H3663), importin-α (IM-75, I1784), and importin-β (31H4, I2534) antibodies were from Sigma; PARP (C2-10, 556362), IKKα (B78-1, 556532), and IKKβ (24, 611254) antibodies were from BD Pharmingen; CK2α (31, 611610) and Hsp90 (68, 610418) antibodies were from BD Transduction Laboratories; phospho-IκBα (5A5, 9246S) and phospho-IKKα/β (16A6, 2697S) antibodies were from Cell Signaling Technology; phospho-serine (AB1603) and phospho-tyrosine (4G10, 05-777) antibodies were from Millipore. |
T193 | 873-939 | Sentence | denotes | The rabbit polyclonal RPS3 antiserum was as described previously6. |
T194 | 940-1105 | Sentence | denotes | The rabbit polyclonal antibody specific for S209 phosphorylated RPS3 was generated and affinity purified by Primm Biotech using the peptide NH2-CKPLPDHV(Sp)IVE-COOH. |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20471 | 232-235 | Protein | denotes | p65 |
T20472 | 237-241 | Protein | denotes | C-20 |
T20473 | 396-462 | Protein | denotes | importin-α (IM-75, I1784), and importin-β (31H4, I2534) antibodies |
T20474 | 480-484 | Protein | denotes | PARP |
T20475 | 604-633 | Protein | denotes | Hsp90 (68, 610418) antibodies |
T20476 | 704-743 | Protein | denotes | phospho-IKKα/β (16A6, 2697S) antibodies |
T20477 | 884-909 | Protein | denotes | polyclonal RPS3 antiserum |
T20478 | 984-988 | Protein | denotes | S209 |
T20479 | 1004-1008 | Protein | denotes | RPS3 |
T20480 | 989-1003 | Phosphorylation | denotes | phosphorylated |
T20481 | 989-1003 | Phosphorylation | denotes | phosphorylated |
R16344 | T20478 | T20480 | themeOf | S209,phosphorylated |
R16345 | T20479 | T20481 | themeOf | RPS3,phosphorylated |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20199 | 989-1003 | Phosphorylation | denotes | phosphorylated |