
PMC:3062687 / 2693-2887
Annnotations
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1156","span":{"begin":69,"end":73},"obj":"O14920"},{"id":"T1157","span":{"begin":90,"end":94},"obj":"P23396"},{"id":"T1158","span":{"begin":117,"end":121},"obj":"P23396"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1068","span":{"begin":3,"end":16},"obj":"JJ"},{"id":"T1069","span":{"begin":17,"end":19},"obj":"PRP"},{"id":"T1070","span":{"begin":20,"end":24},"obj":"VB"},{"id":"T1071","span":{"begin":25,"end":29},"obj":"IN"},{"id":"T1072","span":{"begin":30,"end":33},"obj":"DT"},{"id":"T1073","span":{"begin":34,"end":43},"obj":"NN"},{"id":"T1074","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T1075","span":{"begin":47,"end":49},"obj":"NN"},{"id":"T1076","span":{"begin":50,"end":51},"obj":"-LRB-"},{"id":"T1077","span":{"begin":51,"end":54},"obj":"NN"},{"id":"T1078","span":{"begin":54,"end":55},"obj":"-RRB-"},{"id":"T1079","span":{"begin":56,"end":62},"obj":"NN"},{"id":"T1080","span":{"begin":63,"end":67},"obj":"NN"},{"id":"T1081","span":{"begin":68,"end":69},"obj":"-LRB-"},{"id":"T1082","span":{"begin":69,"end":73},"obj":"NN"},{"id":"T1083","span":{"begin":73,"end":74},"obj":"-RRB-"},{"id":"T1084","span":{"begin":75,"end":89},"obj":"VB"},{"id":"T1085","span":{"begin":90,"end":94},"obj":"NN"},{"id":"T1086","span":{"begin":95,"end":97},"obj":"IN"},{"id":"T1087","span":{"begin":98,"end":104},"obj":"NN"},{"id":"T1088","span":{"begin":105,"end":108},"obj":"CD"},{"id":"T1089","span":{"begin":109,"end":110},"obj":"-LRB-"},{"id":"T1090","span":{"begin":110,"end":114},"obj":"NN"},{"id":"T1091","span":{"begin":114,"end":115},"obj":"-RRB-"},{"id":"T1092","span":{"begin":117,"end":121},"obj":"NN"},{"id":"T1093","span":{"begin":122,"end":126},"obj":"NN"},{"id":"T1094","span":{"begin":127,"end":142},"obj":"NN"},{"id":"T1095","span":{"begin":143,"end":151},"obj":"VB"},{"id":"T1096","span":{"begin":152,"end":155},"obj":"PRP-DOLLAR-"},{"id":"T1097","span":{"begin":156,"end":167},"obj":"NN"},{"id":"T1098","span":{"begin":168,"end":172},"obj":"IN"},{"id":"T1099","span":{"begin":173,"end":183},"obj":"NN"},{"id":"T1100","span":{"begin":183,"end":184},"obj":"-COMMA-"},{"id":"T1101","span":{"begin":185,"end":194},"obj":"VB"}],"relations":[{"id":"R902","pred":"arg1Of","subj":"T1069","obj":"T1070"},{"id":"R903","pred":"arg2Of","subj":"T1070","obj":"T1068"},{"id":"R904","pred":"arg2Of","subj":"T1071","obj":"T1070"},{"id":"R905","pred":"arg3Of","subj":"T1073","obj":"T1070"},{"id":"R906","pred":"arg1Of","subj":"T1073","obj":"T1072"},{"id":"R907","pred":"arg1Of","subj":"T1073","obj":"T1074"},{"id":"R908","pred":"arg1Of","subj":"T1073","obj":"T1086"},{"id":"R909","pred":"arg2Of","subj":"T1077","obj":"T1076"},{"id":"R910","pred":"arg3Of","subj":"T1078","obj":"T1076"},{"id":"R911","pred":"arg1Of","subj":"T1080","obj":"T1075"},{"id":"R912","pred":"arg1Of","subj":"T1080","obj":"T1076"},{"id":"R913","pred":"arg1Of","subj":"T1080","obj":"T1079"},{"id":"R914","pred":"arg1Of","subj":"T1080","obj":"T1081"},{"id":"R915","pred":"arg2Of","subj":"T1082","obj":"T1081"},{"id":"R916","pred":"arg3Of","subj":"T1083","obj":"T1081"},{"id":"R917","pred":"arg2Of","subj":"T1085","obj":"T1074"},{"id":"R918","pred":"arg1Of","subj":"T1085","obj":"T1080"},{"id":"R919","pred":"arg2Of","subj":"T1085","obj":"T1084"},{"id":"R920","pred":"arg2Of","subj":"T1087","obj":"T1086"},{"id":"R921","pred":"arg1Of","subj":"T1087","obj":"T1088"},{"id":"R922","pred":"arg1Of","subj":"T1087","obj":"T1089"},{"id":"R923","pred":"arg2Of","subj":"T1090","obj":"T1089"},{"id":"R924","pred":"arg3Of","subj":"T1091","obj":"T1089"},{"id":"R925","pred":"arg1Of","subj":"T1094","obj":"T1092"},{"id":"R926","pred":"arg1Of","subj":"T1094","obj":"T1093"},{"id":"R927","pred":"arg1Of","subj":"T1094","obj":"T1095"},{"id":"R928","pred":"arg1Of","subj":"T1095","obj":"T1100"},{"id":"R929","pred":"arg2Of","subj":"T1097","obj":"T1095"},{"id":"R930","pred":"arg1Of","subj":"T1097","obj":"T1096"},{"id":"R931","pred":"arg1Of","subj":"T1097","obj":"T1098"},{"id":"R932","pred":"arg2Of","subj":"T1099","obj":"T1098"},{"id":"R933","pred":"arg3Of","subj":"T1101","obj":"T1095"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1450","span":{"begin":3,"end":16},"obj":"JJ"},{"id":"T1451","span":{"begin":17,"end":19},"obj":"PRP"},{"id":"T1452","span":{"begin":20,"end":24},"obj":"VBP"},{"id":"T1453","span":{"begin":25,"end":29},"obj":"IN"},{"id":"T1454","span":{"begin":30,"end":33},"obj":"DT"},{"id":"T1455","span":{"begin":34,"end":43},"obj":"NNP"},{"id":"T1456","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T1457","span":{"begin":47,"end":49},"obj":"NNP"},{"id":"T1458","span":{"begin":50,"end":51},"obj":"-LRB-"},{"id":"T1459","span":{"begin":51,"end":54},"obj":"NNP"},{"id":"T1460","span":{"begin":54,"end":55},"obj":"-RRB-"},{"id":"T1461","span":{"begin":56,"end":62},"obj":"NN"},{"id":"T1462","span":{"begin":63,"end":67},"obj":"NN"},{"id":"T1463","span":{"begin":68,"end":69},"obj":"-LRB-"},{"id":"T1464","span":{"begin":69,"end":73},"obj":"NNP"},{"id":"T1465","span":{"begin":73,"end":74},"obj":"-RRB-"},{"id":"T1466","span":{"begin":75,"end":89},"obj":"VBD"},{"id":"T1467","span":{"begin":90,"end":94},"obj":"CD"},{"id":"T1468","span":{"begin":95,"end":97},"obj":"IN"},{"id":"T1469","span":{"begin":98,"end":104},"obj":"NN"},{"id":"T1470","span":{"begin":105,"end":108},"obj":"CD"},{"id":"T1471","span":{"begin":109,"end":110},"obj":"-LRB-"},{"id":"T1472","span":{"begin":110,"end":114},"obj":"CD"},{"id":"T1473","span":{"begin":114,"end":115},"obj":"-RRB-"},{"id":"T1474","span":{"begin":115,"end":116},"obj":"."},{"id":"T1475","span":{"begin":117,"end":121},"obj":"CD"},{"id":"T1476","span":{"begin":122,"end":126},"obj":"CD"},{"id":"T1477","span":{"begin":127,"end":142},"obj":"NN"},{"id":"T1478","span":{"begin":143,"end":151},"obj":"VBD"},{"id":"T1479","span":{"begin":152,"end":155},"obj":"PRP$"},{"id":"T1480","span":{"begin":156,"end":167},"obj":"NN"},{"id":"T1481","span":{"begin":168,"end":172},"obj":"IN"},{"id":"T1482","span":{"begin":173,"end":183},"obj":"JJ"},{"id":"T1483","span":{"begin":183,"end":184},"obj":","},{"id":"T1484","span":{"begin":185,"end":194},"obj":"VBG"}],"relations":[{"id":"R1253","pred":"nsubj","subj":"T1451","obj":"T1452"},{"id":"R1255","pred":"mark","subj":"T1453","obj":"T1466"},{"id":"R1256","pred":"det","subj":"T1454","obj":"T1455"},{"id":"R1257","pred":"nmod","subj":"T1455","obj":"T1462"},{"id":"R1258","pred":"prep","subj":"T1456","obj":"T1455"},{"id":"R1259","pred":"pobj","subj":"T1457","obj":"T1456"},{"id":"R1260","pred":"punct","subj":"T1458","obj":"T1457"},{"id":"R1261","pred":"appos","subj":"T1459","obj":"T1457"},{"id":"R1262","pred":"punct","subj":"T1460","obj":"T1457"},{"id":"R1263","pred":"compound","subj":"T1461","obj":"T1462"},{"id":"R1264","pred":"nsubj","subj":"T1462","obj":"T1466"},{"id":"R1265","pred":"punct","subj":"T1463","obj":"T1462"},{"id":"R1266","pred":"appos","subj":"T1464","obj":"T1462"},{"id":"R1267","pred":"punct","subj":"T1465","obj":"T1462"},{"id":"R1268","pred":"ccomp","subj":"T1466","obj":"T1452"},{"id":"R1269","pred":"dobj","subj":"T1467","obj":"T1466"},{"id":"R1270","pred":"prep","subj":"T1468","obj":"T1466"},{"id":"R1271","pred":"pobj","subj":"T1469","obj":"T1468"},{"id":"R1272","pred":"nummod","subj":"T1470","obj":"T1469"},{"id":"R1273","pred":"punct","subj":"T1471","obj":"T1472"},{"id":"R1274","pred":"appos","subj":"T1472","obj":"T1469"},{"id":"R1275","pred":"punct","subj":"T1473","obj":"T1466"},{"id":"R1277","pred":"nsubj","subj":"T1475","obj":"T1478"},{"id":"R1278","pred":"nummod","subj":"T1476","obj":"T1477"},{"id":"R1279","pred":"nsubj","subj":"T1477","obj":"T1478"},{"id":"R1280","pred":"ROOT","subj":"T1478","obj":"T1478"},{"id":"R1281","pred":"poss","subj":"T1479","obj":"T1480"},{"id":"R1282","pred":"dobj","subj":"T1480","obj":"T1478"},{"id":"R1283","pred":"prep","subj":"T1481","obj":"T1480"},{"id":"R1284","pred":"pobj","subj":"T1482","obj":"T1481"},{"id":"R1285","pred":"punct","subj":"T1483","obj":"T1478"},{"id":"R1286","pred":"advcl","subj":"T1484","obj":"T1478"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1596","span":{"begin":127,"end":142},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
sentences
{"project":"sentences","denotations":[{"id":"T21","span":{"begin":12,"end":116},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T1866","span":{"begin":34,"end":67},"obj":"Protein"},{"id":"T1867","span":{"begin":69,"end":73},"obj":"Protein"},{"id":"T1868","span":{"begin":75,"end":89},"obj":"Phosphorylation"},{"id":"T1869","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T1870","span":{"begin":98,"end":108},"obj":"Entity"},{"id":"T1871","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T1872","span":{"begin":122,"end":126},"obj":"Entity"},{"id":"T1873","span":{"begin":127,"end":142},"obj":"Phosphorylation"},{"id":"T1874","span":{"begin":143,"end":151},"obj":"Positive_regulation"},{"id":"T1875","span":{"begin":156,"end":167},"obj":"Binding"},{"id":"T1876","span":{"begin":185,"end":194},"obj":"Positive_regulation"}],"relations":[{"id":"R1491","pred":"causeOf","subj":"T1866","obj":"T1868"},{"id":"R1492","pred":"equivalentTo","subj":"T1867","obj":"T1866"},{"id":"R1497","pred":"themeOf","subj":"T1870","obj":"T1868"},{"id":"R1500","pred":"partOf","subj":"T1870","obj":"T1869"},{"id":"R1501","pred":"themeOf","subj":"T1871","obj":"T1875"},{"id":"R1502","pred":"themeOf","subj":"T1872","obj":"T1873"},{"id":"R1503","pred":"partOf","subj":"T1872","obj":"T1871"},{"id":"R1504","pred":"causeOf","subj":"T1873","obj":"T1874"},{"id":"R1505","pred":"causeOf","subj":"T1874","obj":"T1876"},{"id":"R1506","pred":"themeOf","subj":"T1875","obj":"T1874"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T1662","span":{"begin":47,"end":67},"obj":"Protein"},{"id":"T1663","span":{"begin":69,"end":73},"obj":"Protein"},{"id":"T1664","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T1665","span":{"begin":34,"end":43},"obj":"Negative_regulation"},{"id":"T1666","span":{"begin":34,"end":43},"obj":"Negative_regulation"},{"id":"T1667","span":{"begin":98,"end":104},"obj":"Entity"},{"id":"T1668","span":{"begin":75,"end":89},"obj":"Phosphorylation"},{"id":"T1669","span":{"begin":117,"end":126},"obj":"Protein"},{"id":"T1670","span":{"begin":173,"end":183},"obj":"Protein"},{"id":"T1673","span":{"begin":127,"end":142},"obj":"Phosphorylation"},{"id":"T1674","span":{"begin":156,"end":167},"obj":"Binding"},{"id":"T1675","span":{"begin":185,"end":194},"obj":"Positive_regulation"},{"id":"T1679","span":{"begin":143,"end":151},"obj":"Positive_regulation"}],"relations":[{"id":"R1397","pred":"themeOf","subj":"T1662","obj":"T1665"},{"id":"R1398","pred":"partOf","subj":"T1662","obj":"T1667"},{"id":"R1399","pred":"themeOf","subj":"T1663","obj":"T1666"},{"id":"R1400","pred":"partOf","subj":"T1663","obj":"T1667"},{"id":"R1402","pred":"themeOf","subj":"T1664","obj":"T1668"},{"id":"R1403","pred":"partOf","subj":"T1664","obj":"T1667"},{"id":"R1405","pred":"Site","subj":"T1667","obj":"T1668"},{"id":"R1406","pred":"themeOf","subj":"T1669","obj":"T1673"},{"id":"R1407","pred":"themeOf","subj":"T1670","obj":"T1674"},{"id":"R1412","pred":"causeOf","subj":"T1673","obj":"T1679"},{"id":"R1415","pred":"themeOf","subj":"T1674","obj":"T1679"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T761","span":{"begin":34,"end":67},"obj":"Protein"},{"id":"T762","span":{"begin":69,"end":73},"obj":"Protein"},{"id":"T763","span":{"begin":75,"end":89},"obj":"Phosphorylation"},{"id":"T764","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T765","span":{"begin":98,"end":108},"obj":"Entity"},{"id":"T766","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T767","span":{"begin":122,"end":126},"obj":"Entity"},{"id":"T768","span":{"begin":127,"end":142},"obj":"Phosphorylation"},{"id":"T769","span":{"begin":143,"end":151},"obj":"Positive_regulation"},{"id":"T770","span":{"begin":156,"end":167},"obj":"Binding"},{"id":"T771","span":{"begin":185,"end":194},"obj":"Positive_regulation"}],"relations":[{"id":"R610","pred":"causeOf","subj":"T761","obj":"T763"},{"id":"R611","pred":"equivalentTo","subj":"T762","obj":"T761"},{"id":"R612","pred":"themeOf","subj":"T765","obj":"T763"},{"id":"R613","pred":"partOf","subj":"T765","obj":"T764"},{"id":"R614","pred":"themeOf","subj":"T766","obj":"T770"},{"id":"R615","pred":"themeOf","subj":"T767","obj":"T768"},{"id":"R616","pred":"partOf","subj":"T767","obj":"T766"},{"id":"R617","pred":"causeOf","subj":"T768","obj":"T769"},{"id":"R618","pred":"causeOf","subj":"T769","obj":"T771"},{"id":"R619","pred":"themeOf","subj":"T770","obj":"T769"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}
test2
{"project":"test2","denotations":[{"id":"T709","span":{"begin":34,"end":67},"obj":"Protein"},{"id":"T710","span":{"begin":69,"end":73},"obj":"Protein"},{"id":"T711","span":{"begin":75,"end":89},"obj":"Phosphorylation"},{"id":"T712","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T713","span":{"begin":98,"end":108},"obj":"Entity"},{"id":"T714","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T715","span":{"begin":122,"end":126},"obj":"Entity"},{"id":"T716","span":{"begin":127,"end":142},"obj":"Phosphorylation"},{"id":"T717","span":{"begin":143,"end":151},"obj":"Positive_regulation"},{"id":"T718","span":{"begin":156,"end":167},"obj":"Binding"},{"id":"T719","span":{"begin":185,"end":194},"obj":"Positive_regulation"}],"relations":[{"id":"R578","pred":"causeOf","subj":"T709","obj":"T711"},{"id":"R579","pred":"equivalentTo","subj":"T710","obj":"T709"},{"id":"R580","pred":"partOf","subj":"T713","obj":"T712"},{"id":"R581","pred":"themeOf","subj":"T713","obj":"T711"},{"id":"R582","pred":"themeOf","subj":"T714","obj":"T718"},{"id":"R583","pred":"themeOf","subj":"T715","obj":"T716"},{"id":"R584","pred":"partOf","subj":"T715","obj":"T714"},{"id":"R585","pred":"causeOf","subj":"T716","obj":"T717"},{"id":"R586","pred":"themeOf","subj":"T718","obj":"T717"}],"text":"as unknown.\nHere we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). RPS3 S209 phosphorylation enhanced its association with importin-α, mediating"}