PMC:3062687 / 2693-2887
Annnotations
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1156 | 69-73 | O14920 | denotes | IKKβ |
| T1157 | 90-94 | P23396 | denotes | RPS3 |
| T1158 | 117-121 | P23396 | denotes | RPS3 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1068 | 3-16 | JJ | denotes | unknown. Here |
| T1069 | 17-19 | PRP | denotes | we |
| T1070 | 20-24 | VB | denotes | show |
| T1071 | 25-29 | IN | denotes | that |
| T1072 | 30-33 | DT | denotes | the |
| T1073 | 34-43 | NN | denotes | Inhibitor |
| T1074 | 44-46 | IN | denotes | of |
| T1075 | 47-49 | NN | denotes | κB |
| T1076 | 50-51 | -LRB- | denotes | ( |
| T1077 | 51-54 | NN | denotes | IκB |
| T1078 | 54-55 | -RRB- | denotes | ) |
| T1079 | 56-62 | NN | denotes | kinase |
| T1080 | 63-67 | NN | denotes | beta |
| T1081 | 68-69 | -LRB- | denotes | ( |
| T1082 | 69-73 | NN | denotes | IKKβ |
| T1083 | 73-74 | -RRB- | denotes | ) |
| T1084 | 75-89 | VB | denotes | phosphorylated |
| T1085 | 90-94 | NN | denotes | RPS3 |
| T1086 | 95-97 | IN | denotes | at |
| T1087 | 98-104 | NN | denotes | serine |
| T1088 | 105-108 | CD | denotes | 209 |
| T1089 | 109-110 | -LRB- | denotes | ( |
| T1090 | 110-114 | NN | denotes | S209 |
| T1091 | 114-115 | -RRB- | denotes | ) |
| T1092 | 117-121 | NN | denotes | RPS3 |
| T1093 | 122-126 | NN | denotes | S209 |
| T1094 | 127-142 | NN | denotes | phosphorylation |
| T1095 | 143-151 | VB | denotes | enhanced |
| T1096 | 152-155 | PRP-DOLLAR- | denotes | its |
| T1097 | 156-167 | NN | denotes | association |
| T1098 | 168-172 | IN | denotes | with |
| T1099 | 173-183 | NN | denotes | importin-α |
| T1100 | 183-184 | -COMMA- | denotes | , |
| T1101 | 185-194 | VB | denotes | mediating |
| R902 | T1069 | T1070 | arg1Of | we,show |
| R903 | T1070 | T1068 | arg2Of | show,"unknown. Here" |
| R904 | T1071 | T1070 | arg2Of | that,show |
| R905 | T1073 | T1070 | arg3Of | Inhibitor,show |
| R906 | T1073 | T1072 | arg1Of | Inhibitor,the |
| R907 | T1073 | T1074 | arg1Of | Inhibitor,of |
| R908 | T1073 | T1086 | arg1Of | Inhibitor,at |
| R909 | T1077 | T1076 | arg2Of | IκB,( |
| R910 | T1078 | T1076 | arg3Of | ),( |
| R911 | T1080 | T1075 | arg1Of | beta,κB |
| R912 | T1080 | T1076 | arg1Of | beta,( |
| R913 | T1080 | T1079 | arg1Of | beta,kinase |
| R914 | T1080 | T1081 | arg1Of | beta,( |
| R915 | T1082 | T1081 | arg2Of | IKKβ,( |
| R916 | T1083 | T1081 | arg3Of | ),( |
| R917 | T1085 | T1074 | arg2Of | RPS3,of |
| R918 | T1085 | T1080 | arg1Of | RPS3,beta |
| R919 | T1085 | T1084 | arg2Of | RPS3,phosphorylated |
| R920 | T1087 | T1086 | arg2Of | serine,at |
| R921 | T1087 | T1088 | arg1Of | serine,209 |
| R922 | T1087 | T1089 | arg1Of | serine,( |
| R923 | T1090 | T1089 | arg2Of | S209,( |
| R924 | T1091 | T1089 | arg3Of | ),( |
| R925 | T1094 | T1092 | arg1Of | phosphorylation,RPS3 |
| R926 | T1094 | T1093 | arg1Of | phosphorylation,S209 |
| R927 | T1094 | T1095 | arg1Of | phosphorylation,enhanced |
| R928 | T1095 | T1100 | arg1Of | enhanced,"," |
| R929 | T1097 | T1095 | arg2Of | association,enhanced |
| R930 | T1097 | T1096 | arg1Of | association,its |
| R931 | T1097 | T1098 | arg1Of | association,with |
| R932 | T1099 | T1098 | arg2Of | importin-α,with |
| R933 | T1101 | T1095 | arg3Of | mediating,enhanced |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1450 | 3-16 | JJ | denotes | unknown. Here |
| T1451 | 17-19 | PRP | denotes | we |
| T1452 | 20-24 | VBP | denotes | show |
| T1453 | 25-29 | IN | denotes | that |
| T1454 | 30-33 | DT | denotes | the |
| T1455 | 34-43 | NNP | denotes | Inhibitor |
| T1456 | 44-46 | IN | denotes | of |
| T1457 | 47-49 | NNP | denotes | κB |
| T1458 | 50-51 | -LRB- | denotes | ( |
| T1459 | 51-54 | NNP | denotes | IκB |
| T1460 | 54-55 | -RRB- | denotes | ) |
| T1461 | 56-62 | NN | denotes | kinase |
| T1462 | 63-67 | NN | denotes | beta |
| T1463 | 68-69 | -LRB- | denotes | ( |
| T1464 | 69-73 | NNP | denotes | IKKβ |
| T1465 | 73-74 | -RRB- | denotes | ) |
| T1466 | 75-89 | VBD | denotes | phosphorylated |
| T1467 | 90-94 | CD | denotes | RPS3 |
| T1468 | 95-97 | IN | denotes | at |
| T1469 | 98-104 | NN | denotes | serine |
| T1470 | 105-108 | CD | denotes | 209 |
| T1471 | 109-110 | -LRB- | denotes | ( |
| T1472 | 110-114 | CD | denotes | S209 |
| T1473 | 114-115 | -RRB- | denotes | ) |
| T1474 | 115-116 | . | denotes | . |
| T1475 | 117-121 | CD | denotes | RPS3 |
| T1476 | 122-126 | CD | denotes | S209 |
| T1477 | 127-142 | NN | denotes | phosphorylation |
| T1478 | 143-151 | VBD | denotes | enhanced |
| T1479 | 152-155 | PRP$ | denotes | its |
| T1480 | 156-167 | NN | denotes | association |
| T1481 | 168-172 | IN | denotes | with |
| T1482 | 173-183 | JJ | denotes | importin-α |
| T1483 | 183-184 | , | denotes | , |
| T1484 | 185-194 | VBG | denotes | mediating |
| R1253 | T1451 | T1452 | nsubj | we,show |
| R1255 | T1453 | T1466 | mark | that,phosphorylated |
| R1256 | T1454 | T1455 | det | the,Inhibitor |
| R1257 | T1455 | T1462 | nmod | Inhibitor,beta |
| R1258 | T1456 | T1455 | prep | of,Inhibitor |
| R1259 | T1457 | T1456 | pobj | κB,of |
| R1260 | T1458 | T1457 | punct | (,κB |
| R1261 | T1459 | T1457 | appos | IκB,κB |
| R1262 | T1460 | T1457 | punct | ),κB |
| R1263 | T1461 | T1462 | compound | kinase,beta |
| R1264 | T1462 | T1466 | nsubj | beta,phosphorylated |
| R1265 | T1463 | T1462 | punct | (,beta |
| R1266 | T1464 | T1462 | appos | IKKβ,beta |
| R1267 | T1465 | T1462 | punct | ),beta |
| R1268 | T1466 | T1452 | ccomp | phosphorylated,show |
| R1269 | T1467 | T1466 | dobj | RPS3,phosphorylated |
| R1270 | T1468 | T1466 | prep | at,phosphorylated |
| R1271 | T1469 | T1468 | pobj | serine,at |
| R1272 | T1470 | T1469 | nummod | 209,serine |
| R1273 | T1471 | T1472 | punct | (,S209 |
| R1274 | T1472 | T1469 | appos | S209,serine |
| R1275 | T1473 | T1466 | punct | ),phosphorylated |
| R1277 | T1475 | T1478 | nsubj | RPS3,enhanced |
| R1278 | T1476 | T1477 | nummod | S209,phosphorylation |
| R1279 | T1477 | T1478 | nsubj | phosphorylation,enhanced |
| R1280 | T1478 | T1478 | ROOT | enhanced,enhanced |
| R1281 | T1479 | T1480 | poss | its,association |
| R1282 | T1480 | T1478 | dobj | association,enhanced |
| R1283 | T1481 | T1480 | prep | with,association |
| R1284 | T1482 | T1481 | pobj | importin-α,with |
| R1285 | T1483 | T1478 | punct | ",",enhanced |
| R1286 | T1484 | T1478 | advcl | mediating,enhanced |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1596 | 127-142 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21 | 12-116 | Sentence | denotes | Here we show that the Inhibitor of κB (IκB) kinase beta (IKKβ) phosphorylated RPS3 at serine 209 (S209). |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1866 | 34-67 | Protein | denotes | Inhibitor of κB (IκB) kinase beta |
| T1867 | 69-73 | Protein | denotes | IKKβ |
| T1868 | 75-89 | Phosphorylation | denotes | phosphorylated |
| T1869 | 90-94 | Protein | denotes | RPS3 |
| T1870 | 98-108 | Entity | denotes | serine 209 |
| T1871 | 117-121 | Protein | denotes | RPS3 |
| T1872 | 122-126 | Entity | denotes | S209 |
| T1873 | 127-142 | Phosphorylation | denotes | phosphorylation |
| T1874 | 143-151 | Positive_regulation | denotes | enhanced |
| T1875 | 156-167 | Binding | denotes | association |
| T1876 | 185-194 | Positive_regulation | denotes | mediating |
| R1491 | T1866 | T1868 | causeOf | Inhibitor of κB (IκB) kinase beta,phosphorylated |
| R1492 | T1867 | T1866 | equivalentTo | IKKβ,Inhibitor of κB (IκB) kinase beta |
| R1497 | T1870 | T1868 | themeOf | serine 209,phosphorylated |
| R1500 | T1870 | T1869 | partOf | serine 209,RPS3 |
| R1501 | T1871 | T1875 | themeOf | RPS3,association |
| R1502 | T1872 | T1873 | themeOf | S209,phosphorylation |
| R1503 | T1872 | T1871 | partOf | S209,RPS3 |
| R1504 | T1873 | T1874 | causeOf | phosphorylation,enhanced |
| R1505 | T1874 | T1876 | causeOf | enhanced,mediating |
| R1506 | T1875 | T1874 | themeOf | association,enhanced |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1662 | 47-67 | Protein | denotes | κB (IκB) kinase beta |
| T1663 | 69-73 | Protein | denotes | IKKβ |
| T1664 | 90-94 | Protein | denotes | RPS3 |
| T1665 | 34-43 | Negative_regulation | denotes | Inhibitor |
| T1666 | 34-43 | Negative_regulation | denotes | Inhibitor |
| T1667 | 98-104 | Entity | denotes | serine |
| T1668 | 75-89 | Phosphorylation | denotes | phosphorylated |
| T1669 | 117-126 | Protein | denotes | RPS3 S209 |
| T1670 | 173-183 | Protein | denotes | importin-α |
| T1673 | 127-142 | Phosphorylation | denotes | phosphorylation |
| T1674 | 156-167 | Binding | denotes | association |
| T1675 | 185-194 | Positive_regulation | denotes | mediating |
| T1679 | 143-151 | Positive_regulation | denotes | enhanced |
| R1397 | T1662 | T1665 | themeOf | κB (IκB) kinase beta,Inhibitor |
| R1398 | T1662 | T1667 | partOf | κB (IκB) kinase beta,serine |
| R1399 | T1663 | T1666 | themeOf | IKKβ,Inhibitor |
| R1400 | T1663 | T1667 | partOf | IKKβ,serine |
| R1402 | T1664 | T1668 | themeOf | RPS3,phosphorylated |
| R1403 | T1664 | T1667 | partOf | RPS3,serine |
| R1405 | T1667 | T1668 | Site | serine,phosphorylated |
| R1406 | T1669 | T1673 | themeOf | RPS3 S209,phosphorylation |
| R1407 | T1670 | T1674 | themeOf | importin-α,association |
| R1412 | T1673 | T1679 | causeOf | phosphorylation,enhanced |
| R1415 | T1674 | T1679 | themeOf | association,enhanced |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T761 | 34-67 | Protein | denotes | Inhibitor of κB (IκB) kinase beta |
| T762 | 69-73 | Protein | denotes | IKKβ |
| T763 | 75-89 | Phosphorylation | denotes | phosphorylated |
| T764 | 90-94 | Protein | denotes | RPS3 |
| T765 | 98-108 | Entity | denotes | serine 209 |
| T766 | 117-121 | Protein | denotes | RPS3 |
| T767 | 122-126 | Entity | denotes | S209 |
| T768 | 127-142 | Phosphorylation | denotes | phosphorylation |
| T769 | 143-151 | Positive_regulation | denotes | enhanced |
| T770 | 156-167 | Binding | denotes | association |
| T771 | 185-194 | Positive_regulation | denotes | mediating |
| R610 | T761 | T763 | causeOf | Inhibitor of κB (IκB) kinase beta,phosphorylated |
| R611 | T762 | T761 | equivalentTo | IKKβ,Inhibitor of κB (IκB) kinase beta |
| R612 | T765 | T763 | themeOf | serine 209,phosphorylated |
| R613 | T765 | T764 | partOf | serine 209,RPS3 |
| R614 | T766 | T770 | themeOf | RPS3,association |
| R615 | T767 | T768 | themeOf | S209,phosphorylation |
| R616 | T767 | T766 | partOf | S209,RPS3 |
| R617 | T768 | T769 | causeOf | phosphorylation,enhanced |
| R618 | T769 | T771 | causeOf | enhanced,mediating |
| R619 | T770 | T769 | themeOf | association,enhanced |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T709 | 34-67 | Protein | denotes | Inhibitor of κB (IκB) kinase beta |
| T710 | 69-73 | Protein | denotes | IKKβ |
| T711 | 75-89 | Phosphorylation | denotes | phosphorylated |
| T712 | 90-94 | Protein | denotes | RPS3 |
| T713 | 98-108 | Entity | denotes | serine 209 |
| T714 | 117-121 | Protein | denotes | RPS3 |
| T715 | 122-126 | Entity | denotes | S209 |
| T716 | 127-142 | Phosphorylation | denotes | phosphorylation |
| T717 | 143-151 | Positive_regulation | denotes | enhanced |
| T718 | 156-167 | Binding | denotes | association |
| T719 | 185-194 | Positive_regulation | denotes | mediating |
| R578 | T709 | T711 | causeOf | Inhibitor of κB (IκB) kinase beta,phosphorylated |
| R579 | T710 | T709 | equivalentTo | IKKβ,Inhibitor of κB (IκB) kinase beta |
| R580 | T713 | T712 | partOf | serine 209,RPS3 |
| R581 | T713 | T711 | themeOf | serine 209,phosphorylated |
| R582 | T714 | T718 | themeOf | RPS3,association |
| R583 | T715 | T716 | themeOf | S209,phosphorylation |
| R584 | T715 | T714 | partOf | S209,RPS3 |
| R585 | T716 | T717 | causeOf | phosphorylation,enhanced |
| R586 | T718 | T717 | themeOf | association,enhanced |